BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0553 (751 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC110432-1|AAI10433.1| 158|Homo sapiens Unknown (protein for IM... 57 8e-08 BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and pol... 53 1e-06 BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and pol... 53 1e-06 AF046935-1|AAC03107.1| 725|Homo sapiens PCF11p homolog protein. 53 1e-06 AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein. 53 1e-06 >BC110432-1|AAI10433.1| 158|Homo sapiens Unknown (protein for IMAGE:5529131) protein. Length = 158 Score = 56.8 bits (131), Expect = 8e-08 Identities = 29/53 (54%), Positives = 34/53 (64%) Frame = +1 Query: 265 KEISEEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEKVNFH 423 ++ +Y SSL DLT NSKP INMLTILAEEN+ A IV +E KV H Sbjct: 99 EDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAKVFIH 151 >BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) protein. Length = 1555 Score = 53.2 bits (122), Expect = 1e-06 Identities = 27/49 (55%), Positives = 32/49 (65%) Frame = +1 Query: 265 KEISEEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEK 411 ++ +Y SSL DLT NSKP INMLTILAEEN+ A IV +E K Sbjct: 16 EDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAK 64 >BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) protein. Length = 1555 Score = 53.2 bits (122), Expect = 1e-06 Identities = 27/49 (55%), Positives = 32/49 (65%) Frame = +1 Query: 265 KEISEEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEK 411 ++ +Y SSL DLT NSKP INMLTILAEEN+ A IV +E K Sbjct: 16 EDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAK 64 >AF046935-1|AAC03107.1| 725|Homo sapiens PCF11p homolog protein. Length = 725 Score = 53.2 bits (122), Expect = 1e-06 Identities = 27/49 (55%), Positives = 32/49 (65%) Frame = +1 Query: 265 KEISEEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEK 411 ++ +Y SSL DLT NSKP INMLTILAEEN+ A IV +E K Sbjct: 16 EDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAK 64 >AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein. Length = 1644 Score = 53.2 bits (122), Expect = 1e-06 Identities = 27/49 (55%), Positives = 32/49 (65%) Frame = +1 Query: 265 KEISEEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEK 411 ++ +Y SSL DLT NSKP INMLTILAEEN+ A IV +E K Sbjct: 105 EDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAK 153 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 111,465,574 Number of Sequences: 237096 Number of extensions: 2500922 Number of successful extensions: 5010 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4898 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4994 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 9015132854 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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