BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0553 (751 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 3.1 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.1 AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 5.3 AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 5.3 DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 9.3 >DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine receptor alpha9subunit protein. Length = 431 Score = 23.0 bits (47), Expect = 3.1 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -1 Query: 250 PPTMACQTRTFSINCTSVVKYNTNCST 170 PPT + S++C VK+ C+T Sbjct: 145 PPTTCLVFSSGSVSCVPSVKHVAKCAT 171 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 23.0 bits (47), Expect = 3.1 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -3 Query: 317 LLTVRSAKLDAYSSEISFDMMTAAHDG 237 L + ++LD YSS +S + A H G Sbjct: 659 LASANISQLDPYSSLLSITNLAAEHSG 685 >AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter Am-EAAT protein. Length = 543 Score = 22.2 bits (45), Expect = 5.3 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -2 Query: 429 LKMEIHLLQMLFHGFNDNPSVFDILFRKN 343 L M +L +LFH P++F L R+N Sbjct: 314 LYMVTVILGLLFHALITLPTIFWFLTRQN 342 >AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc finger domain-Z3 isoform protein. Length = 92 Score = 22.2 bits (45), Expect = 5.3 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = +3 Query: 306 DRQQQAIDKYAHNSCGREYRTR 371 D+ +Q+ Y C R YRT+ Sbjct: 27 DKHEQSDTLYVCEFCNRRYRTK 48 >DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor protein. Length = 405 Score = 21.4 bits (43), Expect = 9.3 Identities = 6/18 (33%), Positives = 11/18 (61%) Frame = -3 Query: 422 WKFTFSKCFSTVSTITPA 369 W+ T KCF + + + P+ Sbjct: 371 WRLTCRKCFKSRTNLDPS 388 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 220,459 Number of Sequences: 438 Number of extensions: 4803 Number of successful extensions: 6 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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