BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0552 (650 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 31 0.19 SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 30 0.33 SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.77 SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.8 SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 1.8 SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 3.1 SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 3.1 SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 3.1 SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 27 3.1 SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 3.1 SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 26 4.1 SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 4.1 SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 4.1 SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 7.2 SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 25 7.2 SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 7.2 SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 25 7.2 SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 25 9.5 SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 9.5 SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 9.5 SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 9.5 SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 9.5 SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 9.5 SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 9.5 SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 25 9.5 >SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 419 Score = 30.7 bits (66), Expect = 0.19 Identities = 17/82 (20%), Positives = 39/82 (47%) Frame = +1 Query: 265 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 444 N + ++ AL + KA + LE+ ++ E + EE+ H + T+ + + + Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396 Query: 445 TVQESQKLAKKVSSNVQETNEN 510 +QE ++ K + Q+ +E+ Sbjct: 397 IIQEKSRVDKMIDEYRQKLSES 418 >SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces pombe|chr 3|||Manual Length = 238 Score = 29.9 bits (64), Expect = 0.33 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%) Frame = +1 Query: 265 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAA 435 N + + L + +A KA+++LEQ+ + E L K H + E+ + +EKL A Sbjct: 43 NEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAM 101 Query: 436 VQNTVQESQKL 468 ++ + S++L Sbjct: 102 LKRKQKLSEEL 112 >SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 412 Score = 28.7 bits (61), Expect = 0.77 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +2 Query: 86 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVRNSS 265 L + V R F + +EH+ K+LE+Q + L +SKDA A S+ +S+ Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDASSNLTACNRSGSSL-SSN 250 Query: 266 TPSPRVSRERS 298 S R+S++ S Sbjct: 251 FYSSRLSKKTS 261 >SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 642 Score = 27.5 bits (58), Expect = 1.8 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +1 Query: 253 AQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 420 A +L A AK A DA A E +++ +IER+A K A + E+ ATALRE Sbjct: 140 ALELEARAKK---AAQDAE-LASERAREAQSSIERSASLREKQAREEAERAATALRE 192 >SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pombe|chr 2|||Manual Length = 631 Score = 27.5 bits (58), Expect = 1.8 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -2 Query: 343 ASTVPKPPWPCRSRLRALPG 284 AST+ K PWP + L +PG Sbjct: 38 ASTLEKEPWPASTALLVMPG 57 >SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces pombe|chr 2|||Manual Length = 1485 Score = 26.6 bits (56), Expect = 3.1 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = +2 Query: 113 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 232 D +F D++ H K FH E+ + + +K D K W Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706 >SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1462 Score = 26.6 bits (56), Expect = 3.1 Identities = 13/51 (25%), Positives = 28/51 (54%) Frame = -3 Query: 372 ELLGRALDVLPRLFQSLLGLAVRVSERSLETLGEGVELLRTDSEPSFQALL 220 ELL +LP + +LL L +S +++ + E +L+++ +P + +L Sbjct: 318 ELLSVLKTLLPGILLALLSLRTTLSSSAIQLIKEMAIILKSNIDPFLELIL 368 >SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 26.6 bits (56), Expect = 3.1 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Frame = +1 Query: 280 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 435 S++ L + N + KE +E + RT +E EKN LRE+L+ A Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576 >SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces pombe|chr 1|||Manual Length = 394 Score = 26.6 bits (56), Expect = 3.1 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = +2 Query: 77 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 253 C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72 Query: 254 RN 259 N Sbjct: 73 NN 74 >SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizosaccharomyces pombe|chr 1|||Manual Length = 899 Score = 26.6 bits (56), Expect = 3.1 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = +2 Query: 107 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 196 ++ DFFK + ++ H TL ++ NSL+ Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85 >SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |Schizosaccharomyces pombe|chr 2|||Manual Length = 272 Score = 26.2 bits (55), Expect = 4.1 Identities = 15/59 (25%), Positives = 34/59 (57%) Frame = +1 Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 489 K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+++ + S+ Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-EKISRNLRSS 188 >SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1288 Score = 26.2 bits (55), Expect = 4.1 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +1 Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 462 KAKE ++ R +RTA E+RK +E+ R + A Q + Q Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213 >SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pombe|chr 2|||Manual Length = 175 Score = 26.2 bits (55), Expect = 4.1 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = +1 Query: 328 LEQSRQNIERTAEELRKAHPDVEK 399 +EQ+R E T E++++A P++EK Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149 >SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosaccharomyces pombe|chr 2|||Manual Length = 548 Score = 25.4 bits (53), Expect = 7.2 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +1 Query: 370 LRKAHPDVEKNATALREKLQAAVQNTVQE 456 L AH D+E T++RE+L++ + +E Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295 >SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 633 Score = 25.4 bits (53), Expect = 7.2 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = +1 Query: 313 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 483 K KE +E Q ++ +ER E LRK + EK A + ++S +K+ Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187 Query: 484 SNVQETN 504 ++++ N Sbjct: 188 KDMEQEN 194 >SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Schizosaccharomyces pombe|chr 3|||Manual Length = 1108 Score = 25.4 bits (53), Expect = 7.2 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 307 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 402 N K KE E++ + EELR+A PD E++ Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53 >SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc7|Schizosaccharomyces pombe|chr 2|||Manual Length = 1062 Score = 25.4 bits (53), Expect = 7.2 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 134 DIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPS 274 D ++ EF TL+ + L KS+ DF +K + S +S+PS Sbjct: 325 DHDNWDNEFQGTLKISDDVLKKSEHFMDFCSNFKGKNNSSSITSSPS 371 >SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||Manual Length = 307 Score = 25.0 bits (52), Expect = 9.5 Identities = 10/34 (29%), Positives = 18/34 (52%) Frame = +2 Query: 173 EQQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPS 274 ++Q NS+T+ + D +K+W + N S S Sbjct: 84 QKQINSITQMRTKFDKTKSWLSSKRNTLNKSKES 117 >SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr 2|||Manual Length = 463 Score = 25.0 bits (52), Expect = 9.5 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Frame = +2 Query: 131 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPS---PRVSRERSE 301 KD+ + H T LT +K + D D ++ NSS+ S +SR +SE Sbjct: 246 KDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSE 305 Query: 302 TR 307 R Sbjct: 306 LR 307 >SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter Bfr1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1530 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 422 FSRRAVAFFSTSGWALRSSSAVRSMF 345 FSR V FFS AL+S S + +MF Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595 >SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1121 Score = 25.0 bits (52), Expect = 9.5 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 5/90 (5%) Frame = +2 Query: 74 ACIALAQGAMVRRDAPDFFKDIEHHTKEFH-----KTLEQQFNSLTKSKDAQDFSKAWKD 238 A +A +Q RR+ F D K+ + ++ + + L S D +DF K K Sbjct: 499 AALAYSQSGKRRRNIQKIFYDESLSPKDAYAEYKGESAKSSESDLVVSDDEEDFFKVSKV 558 Query: 239 GSESVRNSSTPSPRVSRERSETRTARPRRL 328 +ES+ ++ +R + P+ L Sbjct: 559 ANESISSNHEKLMESESDRLSKKWENPQLL 588 >SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces pombe|chr 1|||Manual Length = 521 Score = 25.0 bits (52), Expect = 9.5 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 298 GDANGKAKEALEQSRQNIERTAEE 369 G NG+AKE E+ R ++T E+ Sbjct: 473 GKGNGRAKETPEEKRARKKKTKED 496 >SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosaccharomyces pombe|chr 2|||Manual Length = 803 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 301 DANGKAKEALEQSRQNIERTAEE 369 D+ KAK LEQ+R +ERT E Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425 >SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosaccharomyces pombe|chr 2|||Manual Length = 803 Score = 25.0 bits (52), Expect = 9.5 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -2 Query: 349 CSASTVPKPPWPCRSRLRALPGDS 278 C +T+PKPP+ + L LP S Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKS 313 >SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pombe|chr 1|||Manual Length = 432 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = +1 Query: 334 QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 486 ++RQ E A+ +RK+ PDV + ++ +V + +E + +SS Sbjct: 284 ENRQFSEYVADRIRKSFPDVSFKNLHVLSCMEDSVMSPFRELGSVTSSMSS 334 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,004,435 Number of Sequences: 5004 Number of extensions: 33133 Number of successful extensions: 183 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 182 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 293780908 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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