Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0552
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 31 0.19
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 30 0.33
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.77
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.8
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 1.8
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 3.1
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 3.1
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 3.1
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 27 3.1
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 3.1
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 26 4.1
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 4.1
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 4.1
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 7.2
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 25 7.2
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 7.2
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 25 7.2
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 25 9.5
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 9.5
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 9.5
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 9.5
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 9.5
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 9.5
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 9.5
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 25 9.5
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 30.7 bits (66), Expect = 0.19
Identities = 17/82 (20%), Positives = 39/82 (47%)
Frame = +1
Query: 265 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 444
N + ++ AL + KA + LE+ ++ E + EE+ H + T+ + + +
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 445 TVQESQKLAKKVSSNVQETNEN 510
+QE ++ K + Q+ +E+
Sbjct: 397 IIQEKSRVDKMIDEYRQKLSES 418
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.9 bits (64), Expect = 0.33
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 265 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAA 435
N + + L + +A KA+++LEQ+ + E L K H + E+ + +EKL A
Sbjct: 43 NEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAM 101
Query: 436 VQNTVQESQKL 468
++ + S++L
Sbjct: 102 LKRKQKLSEEL 112
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 28.7 bits (61), Expect = 0.77
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 86 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVRNSS 265
L + V R F + +EH+ K+LE+Q + L +SKDA A S+ +S+
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDASSNLTACNRSGSSL-SSN 250
Query: 266 TPSPRVSRERS 298
S R+S++ S
Sbjct: 251 FYSSRLSKKTS 261
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 1.8
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 AQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 420
A +L A AK A DA A E +++ +IER+A K A + E+ ATALRE
Sbjct: 140 ALELEARAKK---AAQDAE-LASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 343 ASTVPKPPWPCRSRLRALPG 284
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 113 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 232
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = -3
Query: 372 ELLGRALDVLPRLFQSLLGLAVRVSERSLETLGEGVELLRTDSEPSFQALL 220
ELL +LP + +LL L +S +++ + E +L+++ +P + +L
Sbjct: 318 ELLSVLKTLLPGILLALLSLRTTLSSSAIQLIKEMAIILKSNIDPFLELIL 368
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 280 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 435
S++ L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 77 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 253
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 254 RN 259
N
Sbjct: 73 NN 74
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 107 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 196
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +1
Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 489
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+++ + S+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-EKISRNLRSS 188
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 462
KAKE ++ R +RTA E+RK +E+ R + A Q + Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 328 LEQSRQNIERTAEELRKAHPDVEK 399
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 370 LRKAHPDVEKNATALREKLQAAVQNTVQE 456
L AH D+E T++RE+L++ + +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 313 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 483
K KE +E Q ++ +ER E LRK + EK A + ++S +K+
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 484 SNVQETN 504
++++ N
Sbjct: 188 KDMEQEN 194
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 307 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 402
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 134 DIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPS 274
D ++ EF TL+ + L KS+ DF +K + S +S+PS
Sbjct: 325 DHDNWDNEFQGTLKISDDVLKKSEHFMDFCSNFKGKNNSSSITSSPS 371
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 173 EQQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPS 274
++Q NS+T+ + D +K+W + N S S
Sbjct: 84 QKQINSITQMRTKFDKTKSWLSSKRNTLNKSKES 117
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 131 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPS---PRVSRERSE 301
KD+ + H T LT +K + D D ++ NSS+ S +SR +SE
Sbjct: 246 KDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSE 305
Query: 302 TR 307
R
Sbjct: 306 LR 307
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 422 FSRRAVAFFSTSGWALRSSSAVRSMF 345
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 25.0 bits (52), Expect = 9.5
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 74 ACIALAQGAMVRRDAPDFFKDIEHHTKEFH-----KTLEQQFNSLTKSKDAQDFSKAWKD 238
A +A +Q RR+ F D K+ + ++ + + L S D +DF K K
Sbjct: 499 AALAYSQSGKRRRNIQKIFYDESLSPKDAYAEYKGESAKSSESDLVVSDDEEDFFKVSKV 558
Query: 239 GSESVRNSSTPSPRVSRERSETRTARPRRL 328
+ES+ ++ +R + P+ L
Sbjct: 559 ANESISSNHEKLMESESDRLSKKWENPQLL 588
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 298 GDANGKAKEALEQSRQNIERTAEE 369
G NG+AKE E+ R ++T E+
Sbjct: 473 GKGNGRAKETPEEKRARKKKTKED 496
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 301 DANGKAKEALEQSRQNIERTAEE 369
D+ KAK LEQ+R +ERT E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 349 CSASTVPKPPWPCRSRLRALPGDS 278
C +T+PKPP+ + L LP S
Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKS 313
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 334 QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 486
++RQ E A+ +RK+ PDV + ++ +V + +E + +SS
Sbjct: 284 ENRQFSEYVADRIRKSFPDVSFKNLHVLSCMEDSVMSPFRELGSVTSSMSS 334
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,004,435
Number of Sequences: 5004
Number of extensions: 33133
Number of successful extensions: 183
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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