Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0552
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 34 0.085
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 33 0.15
04_01_0180 + 2034021-2034023,2034741-2035088 32 0.34
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 32 0.46
02_04_0315 - 21969416-21970756 32 0.46
02_04_0436 - 22920106-22920348,22920569-22920884,22929569-229300... 31 1.1
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 30 1.4
03_02_0574 + 9575496-9575517,9575636-9576418,9576754-9577163,957... 30 1.4
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 30 1.4
10_08_0339 + 16922509-16923876,16923941-16924384,16924469-169246... 30 1.8
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 30 1.8
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 29 2.4
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 29 3.2
07_01_0720 + 5512638-5513141,5513588-5514607 29 3.2
04_03_0735 + 19141038-19143227 29 3.2
03_06_0141 - 31955782-31956801 29 3.2
01_06_1268 - 35878520-35879353,35879920-35880332,35881109-358815... 29 3.2
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 29 4.2
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 29 4.2
01_05_0249 - 19903154-19903454,19904114-19904168,19904707-199047... 29 4.2
06_01_0641 - 4652380-4653771,4653850-4654521,4654536-4654707,465... 28 7.4
03_05_0373 + 23581812-23583293 28 7.4
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 28 7.4
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 28 7.4
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 27 9.8
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 27 9.8
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282... 27 9.8
03_06_0040 + 31240164-31241102,31241280-31241897 27 9.8
03_04_0034 + 16679624-16679940,16679980-16680199,16680319-166806... 27 9.8
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +1
Query: 292 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 471
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A ++ ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSLE 574
Query: 472 KKVSSNVQETNEN 510
+N Q ++
Sbjct: 575 NLFVTNSQRVKKD 587
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 319 KEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 495
K+ +QS ERT E + KAH ++ K E +QAA +QE Q VQ
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQFPMSLADQKVQ 475
Query: 496 ETNENW 513
T N+
Sbjct: 476 ATGVNF 481
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 32.3 bits (70), Expect = 0.34
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Frame = +1
Query: 136 HRTPHQGVP*DFRTTV*LAHQVKGRTGLQQGLEGRLRVRAQQLNAFAKSLQGALGDANGK 315
HR +G D T V +GL GR+ +LN K L +
Sbjct: 2 HRATRRGYTGDPPTKVLERENADAHKDQVKGLNGRI----SKLNDTIKELNDTI------ 51
Query: 316 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 444
EALE+ QN+ R EE +K H +++K L K L AA +N
Sbjct: 52 --EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 301 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 480
DA G+ EA+E + E+L A+PDV+ L E L+ A + ++++ L +
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSLENLL 696
Query: 481 SSN 489
+N
Sbjct: 697 ETN 699
>02_04_0315 - 21969416-21970756
Length = 446
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 253 AQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 432
A Q N L + D NG + ALE++ + + E L A + K A+ EK ++
Sbjct: 230 AGQENVELAELHRVVDDENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ES 288
Query: 433 AVQNTVQESQKL 468
A++ QE++ L
Sbjct: 289 AMEALRQENESL 300
>02_04_0436 -
22920106-22920348,22920569-22920884,22929569-22930027,
22930187-22930401,22930741-22930803,22930814-22930830,
22931141-22931389,22931546-22931774,22932427-22932534,
22932954-22933094,22933669-22933729,22933974-22934095,
22934533-22934760,22934857-22935000
Length = 864
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -2
Query: 358 CARCSASTVPKPPWP-CRSRLRAL---PGDSWRRR*AVAHGLGAVLPSLAEVL 212
C R S VP+ R+ +RAL PGD+ RR V HG G + PS A L
Sbjct: 598 CFRVSGHGVPRELQAGMRAAVRALFDLPGDAKRRNADVIHGSGYMAPSAANPL 650
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 283 LQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES 459
++G L D N G+A AL ++E EEL K D++ L K + V +
Sbjct: 191 MEGHLSDPNAGEASGALVSKDDDLEAVREELIKGFLDIDNGGRKLGIKEMGQLNEKVFQI 250
Query: 460 QKLAKKVSSNVQETN 504
LAK V E +
Sbjct: 251 ACLAKLPPEEVGEAS 265
>03_02_0574 +
9575496-9575517,9575636-9576418,9576754-9577163,
9577246-9578079
Length = 682
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 408
VRA LN L+ + + LEQ+R+ N+ A+ELRK H + NAT
Sbjct: 454 VRANDLNQPRDELRKTVTEIKKDVHTQLEQARKTNKNVSGIAKELRKLHREGINNAT 510
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +1
Query: 229 LEGRLRVRAQQLNAFAKSLQGALGDANGK---AKEALEQSRQNIERTAEELRKAHPDVEK 399
L +L + Q+ A+ G +A GK A+EA E++ + + A ELRK + +
Sbjct: 136 LTRQLEEQEQRAAEAAEQEAGRREEAEGKLRAAEEAAERAGKEAQEHAAELRKHRAALAE 195
Query: 400 NATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 507
ATA RE L+A + + ++ ++ +E
Sbjct: 196 LATARRE-LEAELARAARRGDAAEAELGEALERRDE 230
>10_08_0339 +
16922509-16923876,16923941-16924384,16924469-16924655,
16924750-16925702
Length = 983
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDV 393
+R NAF K L+ +GD +G+ L Q ++ E A R++ V
Sbjct: 446 IRCSMKNAFTKILESGMGDGDGEPGVVLTQLARDTEELAVVERRSFSPV 494
>09_04_0151 - 15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/86 (24%), Positives = 42/86 (48%)
Frame = +1
Query: 235 GRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 414
G+L + A + A SLQ AL + +EAL + + + E+L E ++L
Sbjct: 915 GKLEMHAFDMEAEIASLQEALVTTIAEKEEALSRV-ELLTSAVEDLESRLNSAESETSSL 973
Query: 415 REKLQAAVQNTVQESQKLAKKVSSNV 492
E+ A + + S+ ++KK+ +++
Sbjct: 974 LEE-TAVLTRKLDASESISKKLEASI 998
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 289 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 429
G GD G+ + A+ +R E A LR+A ++ A ALR +++
Sbjct: 44 GEKGDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 268 AFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 447
A A + G +G ++ LE+ R+ IER AEE + + E+ A A R + +
Sbjct: 180 AAAAAAAGTKKVGSGPSRVTLERLREGIERRAEE-EERRAEEERRAEAERAAAEERARRE 238
Query: 448 VQESQKLAKK 477
+E + A++
Sbjct: 239 EEEGRARAEE 248
>07_01_0720 + 5512638-5513141,5513588-5514607
Length = 507
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 207 THRTSARLGRTAPSPCATAQRLR 275
T R +ARLG T P+P +++ RLR
Sbjct: 59 TPRNAARLGATPPAPLSSSSRLR 81
>04_03_0735 + 19141038-19143227
Length = 729
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 193 HQVKGRTGLQQGLEGRLRVRAQ-QLNAFAKSLQGALGDANG-KAKEALEQSRQNIERTAE 366
H G T + G + R V A + AF + +G K + A+ R N+ R
Sbjct: 337 HSNDGYTTMDFGGDNRETVAASTETTAFTDVAVAQVNGTSGEKLRSAVSGRRANVLREIS 396
Query: 367 ELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 486
++ +EK A++EKLQ + + S +LA++ S
Sbjct: 397 QIDTRALLIEKAKAAIQEKLQ---EWNITSSSRLAERGKS 433
>03_06_0141 - 31955782-31956801
Length = 339
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 355 ARCSASTVPKPPWPCRSRLRALPGDSWRRR*AV-AHGLGAVLPSL 224
ARC A+TV C++ R + GD +RRR A+ A G P+L
Sbjct: 57 ARCDAATVLSLAATCKALRRIILGDDFRRRLALQAAANGGFDPAL 101
>01_06_1268 -
35878520-35879353,35879920-35880332,35881109-35881510,
35881598-35881619
Length = 556
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 408
+R+++LN L+ + + LEQ+R+ N+ A+ELRK H + NAT
Sbjct: 328 LRSRELNQPRDELRKTVTEIKKDVHTQLEQTRKTNKNVHGIAKELRKLHREGINNAT 384
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 418 EKLQAAVQNTVQESQKLAKKVSSNVQETN 504
EKLQ + + QE+Q+L KK+SS ++ ++
Sbjct: 153 EKLQKEISSLSQENQELKKKISSVLENSD 181
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 298 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVE-KNATALREKLQAA-VQNTVQESQKL 468
GD++G AKE L + SR ++ E RK +E K LR + Q +Q+ ++ +Q++
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQV 179
>01_05_0249 -
19903154-19903454,19904114-19904168,19904707-19904791,
19905140-19905511
Length = 270
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 271 FAKSLQGALG--DANGKAKEALEQSRQNIERTAEELRKAHPDV 393
F KSL G + D +GKAK+ + + + + +EE++ + DV
Sbjct: 184 FEKSLVGQINIEDMSGKAKDVINEEGSSEDGNSEEMKDSDDDV 226
>06_01_0641 -
4652380-4653771,4653850-4654521,4654536-4654707,
4655515-4655690
Length = 803
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 194 TKSKDAQDFSKAW---KDGSESVRNSSTPSPRVSRERSE 301
T SK A DF + K SVRNS+ +PRVS RS+
Sbjct: 164 TISKGAPDFCTVYVINKGKVSSVRNSTRQAPRVSPLRSQ 202
>03_05_0373 + 23581812-23583293
Length = 493
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 355 ARCSASTVPKPPW 317
+RCSAST PK PW
Sbjct: 66 SRCSASTPPKSPW 78
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +1
Query: 235 GRLRVRAQQLNAFAKSLQGALGDANGK-AKEALEQSRQNIERTAEELRKAHPDVEKNATA 411
G L V+A+ KS + + + G+ ++E +++ + E AEE +K ++ A
Sbjct: 513 GILNVKAEDKGT-GKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERID--ARN 569
Query: 412 LREKLQAAVQNTVQESQKLAKKVSSNVQETNE 507
E ++NTV + KLA K+ S +E E
Sbjct: 570 QLETYVYNMKNTVGDKDKLADKLESEEKEKVE 601
>01_07_0084 + 40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 176 QQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPSPR---VSRERSETRTARPRRLWN 334
+Q+N +S + + +S+ W G +S N+ T P S ++S + A P R W+
Sbjct: 1116 RQWNYGQQSYNPEPYSRQWSSGQQSY-NTVTAEPSRQWSSGQQSYSNPAEPSRQWS 1170
>12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 301 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 480
D + A+E +E R+ + +R+A P V L EKLQ +Q V++ +K++ +
Sbjct: 848 DDDMTARERMEHLRRQEREYRQLVRRAKPCV------LPEKLQRELQGMVKKQRKVSSGL 901
Query: 481 SSNVQETNENW 513
+ E W
Sbjct: 902 LKRMAGRIERW 912
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 5 RFASPPHSVSRQHIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQF 184
RF + P S SR+ ++V A + +R A + +K + E H L +
Sbjct: 694 RFKAIP-SHSRRRSTFEQYVRTRADEERKEKRAAQRAAVEAYKQLLEEASEGHTILIHKM 752
Query: 185 NSLTKSKDAQDFSKAW 232
+ +KD ++F + W
Sbjct: 753 QDINSNKDYKEFKRKW 768
>05_01_0361 -
2824728-2826043,2826288-2826507,2827616-2827702,
2827726-2827980,2828704-2828733
Length = 635
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 SPVRISSALSLSTA--HHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 162
SP R++ L T HH VR +HR+ P+ AT S + +G H +P
Sbjct: 473 SPSRVNPVLLCETGQRHHYSSVRHGDPVHRNSPQISVATSPSPIRRGD-PAHINIP 527
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 83 ALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA--WKD 238
A+AQ RR+APD D+ +E L+ + N L + + D+ A W D
Sbjct: 190 AIAQSKTTRREAPDADTDMSMEAQELRHVLD-ELNPLIGAANLWDYLPALRWFD 242
>03_04_0034 +
16679624-16679940,16679980-16680199,16680319-16680624,
16680703-16681044,16681066-16681257,16681533-16681684,
16681803-16681974,16682017-16682338,16682414-16682862
Length = 823
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +1
Query: 289 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 447
GA G A A SR ++ R +L H D ++K + +NT
Sbjct: 140 GAAVGGGGAAVSARPASRASVRRNVSDLAAEHSDANDGIPVRKDKANWSARNT 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,274,961
Number of Sequences: 37544
Number of extensions: 267301
Number of successful extensions: 1535
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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