BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0552 (650 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 42 3e-04 At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 39 0.003 At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 33 0.12 At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 33 0.12 At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 33 0.12 At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 33 0.12 At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 33 0.22 At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 32 0.29 At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 32 0.29 At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 32 0.29 At2g20510.1 68415.m02395 mitochondrial import inner membrane tra... 31 0.50 At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 31 0.66 At2g35070.1 68415.m04302 expressed protein 31 0.66 At2g19410.1 68415.m02264 protein kinase family protein contains ... 31 0.88 At4g27595.1 68417.m03964 protein transport protein-related low s... 30 1.2 At5g46070.1 68418.m05665 guanylate-binding family protein contai... 30 1.5 At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 30 1.5 At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 30 1.5 At3g50370.1 68416.m05508 expressed protein 29 2.0 At2g48160.1 68415.m06031 PWWP domain-containing protein 29 2.7 At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 2.7 At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 29 2.7 At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 29 2.7 At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putati... 29 2.7 At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 29 3.5 At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont... 28 4.7 At3g58840.1 68416.m06558 expressed protein 28 4.7 At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 28 4.7 At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 28 4.7 At3g12360.1 68416.m01541 ankyrin repeat family protein contains ... 28 4.7 At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 28 4.7 At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 28 4.7 At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 28 4.7 At5g61920.1 68418.m07773 hypothetical protein 28 6.2 At5g55140.1 68418.m06875 ribosomal protein L30 family protein co... 28 6.2 At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 6.2 At3g49170.1 68416.m05374 pentatricopeptide (PPR) repeat-containi... 28 6.2 At3g09550.1 68416.m01134 ankyrin repeat family protein contains ... 28 6.2 At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 28 6.2 At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 28 6.2 At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 28 6.2 At5g40450.1 68418.m04905 expressed protein 27 8.2 At3g59080.1 68416.m06586 aspartyl protease family protein contai... 27 8.2 At3g50100.1 68416.m05477 exonuclease family protein contains exo... 27 8.2 At3g46990.1 68416.m05103 hypothetical protein contains Pfam prof... 27 8.2 At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 8.2 At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ... 27 8.2 At1g01840.1 68414.m00103 expressed protein 27 8.2 >At2g36070.1 68415.m04429 mitochondrial import inner membrane translocase subunit TIM44, putative contains similarity to Swiss-Prot:O35857 import inner membrane translocase subunit TIM44, mitochondrial precursor [Mus musculus]; contains Pfam domian PF04280: Mitochondrial import inner membrane, translocase subunit TIM44 Length = 469 Score = 42.3 bits (95), Expect = 3e-04 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Frame = +1 Query: 187 LAHQ--VKGRTGLQQGLEGRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERT 360 L HQ V R GL QG R + F+K ++G D+N + ++ +++ ++ Sbjct: 21 LVHQRRVGARLGLLQGNGFASHRRFSVFSEFSKKIRGE-ADSNPEFQKTVKEFKER---- 75 Query: 361 AEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 498 AEEL+ D++ EKL Q E++ +AKKVSS+V++ Sbjct: 76 AEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVKD 121 >At2g36640.1 68415.m04494 late embryogenesis abundant protein (ECP63) / LEA protein nearly identical to to LEA protein in group 3 [Arabidopsis thaliana] GI:1526424; contains Pfam profile PF02987: Late embryogenesis abundant protein Length = 448 Score = 39.1 bits (87), Expect = 0.003 Identities = 18/76 (23%), Positives = 39/76 (51%) Frame = +1 Query: 283 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 462 L G +A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q+++ Sbjct: 278 LSGKTEEAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTR 337 Query: 463 KLAKKVSSNVQETNEN 510 + + + +ET ++ Sbjct: 338 ESTESGAQKAEETKDS 353 >At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain and PF00569: Zinc finger, ZZ type Length = 986 Score = 33.5 bits (73), Expect = 0.12 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +1 Query: 277 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 450 K LQ L D N + E + S+ + ++A + + A DVE T EK V TV Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765 Query: 451 QESQKLAKKVSSN 489 E +LAK+ +N Sbjct: 766 GEKVQLAKEEGAN 778 >At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain and PF00569: Zinc finger, ZZ type Length = 983 Score = 33.5 bits (73), Expect = 0.12 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +1 Query: 277 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 450 K LQ L D N + E + S+ + ++A + + A DVE T EK V TV Sbjct: 704 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 763 Query: 451 QESQKLAKKVSSN 489 E +LAK+ +N Sbjct: 764 GEKVQLAKEEGAN 776 >At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain and PF00569: Zinc finger, ZZ type Length = 985 Score = 33.5 bits (73), Expect = 0.12 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +1 Query: 277 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 450 K LQ L D N + E + S+ + ++A + + A DVE T EK V TV Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765 Query: 451 QESQKLAKKVSSN 489 E +LAK+ +N Sbjct: 766 GEKVQLAKEEGAN 778 >At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain and PF00569: Zinc finger, ZZ type Length = 985 Score = 33.5 bits (73), Expect = 0.12 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +1 Query: 277 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 450 K LQ L D N + E + S+ + ++A + + A DVE T EK V TV Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765 Query: 451 QESQKLAKKVSSN 489 E +LAK+ +N Sbjct: 766 GEKVQLAKEEGAN 778 >At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3) Similar to Arabidopsis luminal binding protein (gb|D89342); contains Pfam domain PF00012: dnaK protein Length = 678 Score = 32.7 bits (71), Expect = 0.22 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 3/94 (3%) Frame = +1 Query: 235 GRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 414 G L+V+A+ + AK+ Q ++ N K + E+ + I R AEE + +++ A Sbjct: 529 GILQVKAE--DKVAKTSQ-SITITNDKGRLTEEEIEEMI-REAEEFAEEDKIMKEKIDA- 583 Query: 415 REKLQAAVQN---TVQESQKLAKKVSSNVQETNE 507 R KL+ V N TV + +KLAKK+S +E E Sbjct: 584 RNKLETYVYNMKSTVADKEKLAKKISDEDKEKME 617 >At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:433663) [Arabidopsis thaliana]; myosin-like protein my5, common sunflower, PIR:T14279 Length = 1545 Score = 32.3 bits (70), Expect = 0.29 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Frame = +1 Query: 322 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-QKLAKKVSSNV 492 EAL+ S Q + AE LRKA + E + L +L+ A + Q ES Q+L +K+S++ Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056 Query: 493 QE 498 E Sbjct: 1057 SE 1058 >At3g15670.1 68416.m01986 late embryogenesis abundant protein, putative / LEA protein, putative similar to SP|P13934 Late embryogenesis abundant protein 76 (LEA 76) {Brassica napus}; contains Pfam profile PF02987: Late embryogenesis abundant protein Length = 225 Score = 32.3 bits (70), Expect = 0.29 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = +1 Query: 286 QGALGDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 462 Q G A G ++ E+ R +TA+ + KAH + + QAA Q + +Q Sbjct: 18 QEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQ 77 Query: 463 KLAKKVSSNVQETNE 507 +K S Q + Sbjct: 78 SAKEKTSQTAQTAQQ 92 Score = 29.5 bits (63), Expect = 2.0 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%) Frame = +1 Query: 298 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAK 474 G+ GKA+E Q+ + AEE R K + E Q+A T Q +Q + Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70 Query: 475 KVSSNVQETNE 507 K Q E Sbjct: 71 KAHETAQSAKE 81 >At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family protein / kinesin motor family protein similar to kinesin-like protein GB:CAB41097 GI:5541717 from [Arabidopsis thaliana]; contains Pfam profiles PF00225: Kinesin motor domain, PF00514: Armadillo/beta-catenin-like repeat Length = 894 Score = 32.3 bits (70), Expect = 0.29 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%) Frame = +1 Query: 229 LEGRLRVRAQ-QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 405 +E L+++ + + +K L+ L + + L+ ++ER + + +VEKN Sbjct: 402 VENMLKIKEEFDYKSLSKKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNF 461 Query: 406 TALREKLQAAVQNTVQES-QKLAKKVSSNVQETNEN 510 EK + Q ES +KL +K+ SN Q +EN Sbjct: 462 AEALEKEKLKCQMEYMESVKKLEEKLISN-QRNHEN 496 >At2g20510.1 68415.m02395 mitochondrial import inner membrane translocase subunit TIM44, putative contains similarity to Swiss-Prot:O35857 import inner membrane translocase subunit TIM44, mitochondrial precursor [Mus musculus]; contains Pfam domian PF04280: Mitochondrial import inner membrane, translocase subunit TIM44 Length = 472 Score = 31.5 bits (68), Expect = 0.50 Identities = 18/81 (22%), Positives = 39/81 (48%) Frame = +1 Query: 256 QQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 435 ++ + F + + G+A+ + E++ + ++ EE + D++ EKL Sbjct: 43 RRFSVFTEFSKNIRGEAHSNPE--FERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQ 100 Query: 436 VQNTVQESQKLAKKVSSNVQE 498 E++ AKKVSS+V++ Sbjct: 101 ADGVWTEAESAAKKVSSSVKD 121 >At3g09980.1 68416.m01198 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) Length = 178 Score = 31.1 bits (67), Expect = 0.66 Identities = 21/75 (28%), Positives = 39/75 (52%) Frame = +1 Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 426 V ++QL A L G++ ++ +KE E SR + R ++EK +RE++ Sbjct: 19 VHSRQLGA---QLSGSMSFSSQMSKEDEEMSRTALSA----FRAKEEEIEKKKMEIRERV 71 Query: 427 QAAVQNTVQESQKLA 471 QA + +E+++LA Sbjct: 72 QAQLGRVEEETKRLA 86 >At2g35070.1 68415.m04302 expressed protein Length = 158 Score = 31.1 bits (67), Expect = 0.66 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = +1 Query: 208 RTGLQQGLEGRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ-NIERTAEELRKAH 384 + G+ + LE + V + Q A ++ GK K + +S + R AEE RK Sbjct: 30 KLGMVKALEA-INVPSTQAEALTGAITSGFESVMGKVKADIAKSEEYKSTRVAEEFRKMR 88 Query: 385 PDVEK 399 D+EK Sbjct: 89 ADIEK 93 >At2g19410.1 68415.m02264 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain Length = 801 Score = 30.7 bits (66), Expect = 0.88 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +2 Query: 209 AQDFSKAWKDGSESVRNSSTPSPRVSRERSETRTARPRRL 328 A DF + W ++R+ + P PR S E R+A R L Sbjct: 190 AHDFLRDWAASFHTLRSPTLPDPRQSTEAGTRRSASAREL 229 >At4g27595.1 68417.m03964 protein transport protein-related low similarity to SP|P25386 Intracellular protein transport protein USO1 {Saccharomyces cerevisiae} Length = 1212 Score = 30.3 bits (65), Expect = 1.2 Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +1 Query: 301 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 471 D K KE+L E QNI + AEELR D K E+L AA ++ V++ KL Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702 Query: 472 KKVSSNVQETNE 507 S VQE E Sbjct: 703 ----STVQEAEE 710 >At5g46070.1 68418.m05665 guanylate-binding family protein contains Pfam domains PF02263: Guanylate-binding protein, N-terminal domain and PF02841: Guanylate-binding protein, C-terminal domain Length = 1060 Score = 29.9 bits (64), Expect = 1.5 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +1 Query: 343 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 474 +++E+ +E RKAH + A AL +LQAA + Q+LA+ Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 919 >At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam profile: PF03637 mob1/phocein family Length = 217 Score = 29.9 bits (64), Expect = 1.5 Identities = 12/51 (23%), Positives = 26/51 (50%) Frame = +1 Query: 337 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 489 S N+ RT ++ HP+ + + +RE + + ++E+ +L + V N Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59 >At1g72100.1 68414.m08334 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to embryogenic gene [Betula pendula] GI:4539485; contains Pfam profile PF02987: Late embryogenesis abundant protein Length = 480 Score = 29.9 bits (64), Expect = 1.5 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +1 Query: 313 KAKEALEQSRQNIERTAEEL-RKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 489 KA +A E+ R+ E + +KAH E+ +REK Q + +S+ ++V + Sbjct: 233 KAHDAKEKVREKAHDVKETVAQKAHESKERAKDRVREKAQELKETATHKSKNAWERVKNG 292 Query: 490 VQE 498 +E Sbjct: 293 ARE 295 >At3g50370.1 68416.m05508 expressed protein Length = 2179 Score = 29.5 bits (63), Expect = 2.0 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = +1 Query: 331 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESQKLAKK 477 EQ R R AEELRK+ + EK+ + E + QAA Q ++ +K++++ Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580 >At2g48160.1 68415.m06031 PWWP domain-containing protein Length = 1366 Score = 29.1 bits (62), Expect = 2.7 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +1 Query: 4 PVRISSALSLSTAHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 162 P+R++ LS ST H+ G + S ++L S P++DG+ + R H PH P Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239 >At2g32240.1 68415.m03940 expressed protein contains Pfam profile: PF04508 viral A-type inclusion protein repeat Length = 775 Score = 29.1 bits (62), Expect = 2.7 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Frame = +1 Query: 217 LQQGLEGRLRVRAQ-QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDV 393 LQ E L QL + L+G +G + + + AL++ + IER ++ Sbjct: 328 LQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRLEEAIERFNQK-------- 379 Query: 394 EKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 507 E ++ L EKL+ +N ++E +KLA + +S V +T + Sbjct: 380 ETESSDLVEKLKTH-ENQIEEYKKLAHE-ASGVADTRK 415 >At2g27170.1 68415.m06029 structural maintenance of chromosomes (SMC) family protein similar to basement membrane-associated chondroitin proteoglycan Bamacan [Rattus norvegicus] GI:1785540; contains Pfam profile PF02463: RecF/RecN/SMC N terminal domain. No suitalble start codon was identified. Length = 1207 Score = 29.1 bits (62), Expect = 2.7 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = +1 Query: 256 QQLNAFAKSLQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 432 QQL+ KSL+ + D A+E LEQ + +EE K + VEK A + L Sbjct: 214 QQLDKQRKSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEK-AQDDSKSLDE 272 Query: 433 AVQNTVQESQKLAK-KVSSNVQET 501 +++ +E Q L K K + Q+T Sbjct: 273 SLKELTKELQTLYKEKETVEAQQT 296 >At1g79830.1 68414.m09326 expressed protein weak similarity to TATA element modulatory factor (TMF) (Swiss-Prot:P82094) [Homo sapiens] Length = 927 Score = 29.1 bits (62), Expect = 2.7 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 7/84 (8%) Frame = +1 Query: 253 AQQLNAFAKSLQGALGDANGKAKEALEQ---SRQNIERTAEELRKAHPDVEK----NATA 411 A L A L+ + + K K+ L++ + I++ E + + D+E+ N++A Sbjct: 722 ADTLEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSA 781 Query: 412 LREKLQAAVQNTVQESQKLAKKVS 483 + E+L A QN+ E+ K ++K S Sbjct: 782 VSEQLPIARQNSAFENDKFSEKRS 805 >At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putative / HD-ZIP transcription factor, putative similar to homeodomain leucine zipper protein GI:5006851 from [Oryza sativa] Length = 206 Score = 29.1 bits (62), Expect = 2.7 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 554 HPGGDQEDPGGRQRQAVSVDIELSHLINISFI 649 H D + GGR+R+ + + E SHL+ SFI Sbjct: 55 HVNEDDSNSGGRRRKKLRLTKEQSHLLEESFI 86 >At4g32160.1 68417.m04574 phox (PX) domain-containing protein contains Pfam profile PF00787: PX domain Length = 723 Score = 28.7 bits (61), Expect = 3.5 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%) Frame = +1 Query: 262 LNAFAKSLQGALGDANGKAKEALEQS------RQN-IERTAEELRKAHPDVEKNATALRE 420 LN L+G L ++KE LEQ+ R N ++ EELR+ ++E + + Sbjct: 428 LNKKVNDLEGELETTKQRSKENLEQAIMSERERFNQMQWDMEELRQKSYEMEMKLKSRED 487 Query: 421 ---KLQAAVQNTVQESQKLAKKVSSNVQETNE 507 + VQ+T+ E L+K++ + Q+ + Sbjct: 488 GSSHAEPTVQSTISEKHVLSKELDARKQQLED 519 >At4g21020.1 68417.m03041 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to SP|P23283 Desiccation-related protein {Craterostigma plantagineum}; contains Pfam profile PF02987: Late embryogenesis abundant protein Length = 266 Score = 28.3 bits (60), Expect = 4.7 Identities = 15/69 (21%), Positives = 33/69 (47%) Frame = +1 Query: 304 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 483 A A A E+++ ERT +++ + A +EK + ++T+ +++ A+ Sbjct: 114 AKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAK 173 Query: 484 SNVQETNEN 510 V+E E+ Sbjct: 174 EKVKEYGED 182 >At3g58840.1 68416.m06558 expressed protein Length = 318 Score = 28.3 bits (60), Expect = 4.7 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = +1 Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 486 KA + + + E+ AE LRK +VEK L K+ V+E ++ +KK+ S Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVL---EVREMEEKSKKLRS 182 >At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C (PP2C6) identical to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; contains TIGRFAM TIGR01573 : CRISPR-associated protein Cas2 Length = 384 Score = 28.3 bits (60), Expect = 4.7 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +1 Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 468 KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ + Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237 >At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C (PP2C6) identical to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to protein phosphatase 2C (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; contains TIGRFAM TIGR01573 : CRISPR-associated protein Cas2 Length = 384 Score = 28.3 bits (60), Expect = 4.7 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +1 Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 468 KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ + Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237 >At3g12360.1 68416.m01541 ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023 Length = 590 Score = 28.3 bits (60), Expect = 4.7 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = +1 Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 408 +RA +LN L+ + LEQ+++ N+ ++ELRK H + NAT Sbjct: 363 LRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHREGINNAT 419 >At2g26570.1 68415.m03187 expressed protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827); weak similarity to merozoite surface protein 3 alpha (GI:27596802) [Plasmodium vivax] Length = 807 Score = 28.3 bits (60), Expect = 4.7 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = +1 Query: 274 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 453 AKSL + KAKE EQ++ L A ++E A E+L A ++ Sbjct: 563 AKSLAEVAREELRKAKEEAEQAKAGASTMESRLFAAQKEIE--AAKASERLALAAIKALE 620 Query: 454 ESQKLAK 474 ES+ K Sbjct: 621 ESESTLK 627 >At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative nearly identical to ACC oxidase (ACC ox1) GI:587086 from [Brassica oleracea] Length = 320 Score = 28.3 bits (60), Expect = 4.7 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +2 Query: 122 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 238 D IE TK+ +KT EQ+FN + KSK + +D Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86 >At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827) Length = 752 Score = 28.3 bits (60), Expect = 4.7 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +1 Query: 274 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 453 AKSL A + KAKE ++++ + +L ++ ++E A+ EKL A +Q Sbjct: 512 AKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEME--ASRASEKLALAAIKALQ 569 Query: 454 ESQ 462 E++ Sbjct: 570 ETE 572 >At5g61920.1 68418.m07773 hypothetical protein Length = 238 Score = 27.9 bits (59), Expect = 6.2 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 6/69 (8%) Frame = +1 Query: 322 EALEQSRQNIERTAEELRKAHPDVEKNATALREKL------QAAVQNTVQESQKLAKKVS 483 E+LE S Q +ER EE ++ + E+ + EKL + + V+ +KL ++S Sbjct: 170 ESLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIS 229 Query: 484 SNVQETNEN 510 + + EN Sbjct: 230 TARNKAVEN 238 >At5g55140.1 68418.m06875 ribosomal protein L30 family protein contains similarity to 50S ribosomal protein L30 Length = 109 Score = 27.9 bits (59), Expect = 6.2 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Frame = +1 Query: 217 LQQGLEGRLRVRAQQLNAFA--KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD 390 L +GL G ++ + L A + + L N + ++Q ++ + EE+ A + Sbjct: 23 LVRGLPGTRKLHRRTLEAMGLRRCHRTVLHSNNSSIRGMIDQVKRMVVVETEEMYNARKE 82 Query: 391 VEKNATALREKLQAAVQNTVQESQKLA 471 E N ALR L + + +S ++ Sbjct: 83 AEANHKALRPPLVVSHSSPATDSSNMS 109 >At5g07780.1 68418.m00890 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 464 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = -2 Query: 379 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 275 P PRPC+R + P + RALPG W Sbjct: 61 PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95 >At3g49170.1 68416.m05374 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats Length = 850 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -3 Query: 318 GLAVRVSERSLETLGEGVELLRTDSEPSFQALLKSCASFDLVSE 187 G A+RV E + + EGV+ +E ++ A+L +C+ LVSE Sbjct: 554 GFAIRVLETFNQMIEEGVK----PNEVTYVAILSACSHVGLVSE 593 >At3g09550.1 68416.m01134 ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023 Length = 436 Score = 27.9 bits (59), Expect = 6.2 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = +1 Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 408 ++A +LN L+ + + LEQ+R+ N++ A+ELRK H NAT Sbjct: 206 LKANELNQPRDELRKTVTEIKKDVHTQLEQTRKTNKNVDGIAKELRKLHRAGINNAT 262 >At2g36410.2 68415.m04470 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) Length = 192 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = +1 Query: 310 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 471 G + SR++ E T L R ++EK +RE++QA + QE+++L+ Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101 >At2g36410.1 68415.m04469 expressed protein contains Pfam profile PF04949: Family of unknown function (DUF662) Length = 195 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = +1 Query: 310 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 471 G + SR++ E T L R ++EK +RE++QA + QE+++L+ Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101 >At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane domains; weak similarity to HPSR2 - heavy chain potential motor protein (GI:871048) [Giardia intestinalis] Length = 702 Score = 27.9 bits (59), Expect = 6.2 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +1 Query: 286 QGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 423 Q AL + + +AL + ER AEE R AH + K A RE+ Sbjct: 369 QAALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413 >At5g40450.1 68418.m04905 expressed protein Length = 2910 Score = 27.5 bits (58), Expect = 8.2 Identities = 16/69 (23%), Positives = 34/69 (49%) Frame = +1 Query: 301 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 480 D+NG E ++Q NI EE+ A P + ++ + + +++ + S++ +K V Sbjct: 824 DSNGAEAEQIDQ---NITNETEEILVAKPVSLLDVKSVEQMQKPKLESPSEVSEETSKTV 880 Query: 481 SSNVQETNE 507 ++E E Sbjct: 881 DEKIEEKPE 889 >At3g59080.1 68416.m06586 aspartyl protease family protein contains similarity to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) [Nicotiana tabacum]; contains Pfam profile PF00026: Eukaryotic aspartyl protease Length = 535 Score = 27.5 bits (58), Expect = 8.2 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = -2 Query: 352 RCSASTVPKPPWPCRSRLRALPGDSW 275 RC+ + P PP PC+S ++ P W Sbjct: 229 RCNLVSSPDPPMPCKSDNQSCPYYYW 254 >At3g50100.1 68416.m05477 exonuclease family protein contains exonuclease domain, Pfam:PF00929 Length = 406 Score = 27.5 bits (58), Expect = 8.2 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1 Query: 256 QQLNAFAKSLQGA-LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 423 Q L+ K LQ L NG KE L +N + ++ R++H D+ + T ++K Sbjct: 11 QVLDELVKLLQSRDLRGENGNWKEFLHVYDKNADSPSDPSRRSHEDLVQFLTTFKKK 67 >At3g46990.1 68416.m05103 hypothetical protein contains Pfam profile PF05340: Protein of unknown function (DUF740) Length = 547 Score = 27.5 bits (58), Expect = 8.2 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = +2 Query: 152 KEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPSPRVSRERSETRTARPRRLW 331 KE L ++ + T +K + S + G + R+SS PR+S + +PR W Sbjct: 170 KEIASVLSRRLKNFTLNKRNDEKSDSRFAGIVNGRHSSDVDPRLSFDGGRISFEKPRSSW 229 Query: 332 N 334 + Sbjct: 230 D 230 >At1g79280.1 68414.m09242 expressed protein weak similarity to Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens] Length = 2111 Score = 27.5 bits (58), Expect = 8.2 Identities = 15/64 (23%), Positives = 34/64 (53%) Frame = +1 Query: 316 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 495 AKE +E+ R +E + + + + N TAL++ +++A +N E++K + + + + Sbjct: 970 AKEEIEKLRGEVESSKSHMLQYKSIAQVNETALKQ-MESAHENFRLEAEKRQRSLEAELV 1028 Query: 496 ETNE 507 E Sbjct: 1029 SLRE 1032 >At1g19700.1 68414.m02457 homeobox-leucine zipper family protein similar to BEL1-like homeodomain 1 (GI:13877517) [Arabidopsis thaliana]; similar to homeodomain protein GI:7239157 from (Malus domestica); contains weak hit to Pfam profile PF00046: Homeobox domain Length = 538 Score = 27.5 bits (58), Expect = 8.2 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Frame = +1 Query: 235 GRLRVRAQQLNAFAKSLQGALG----DANGKAKEALEQSRQNIERTAEELRKAHPDVEKN 402 G+ +++ N+ +K ++G G D+NGK+ E R+ ++ +L +V+K Sbjct: 193 GKKKMKVNDFNSGSKEIEGGGGELSSDSNGKSIELSTIEREELQNKKNKLLTMVDEVDKR 252 Query: 403 ATALREKLQA 432 +++A Sbjct: 253 YNQYYHQMEA 262 >At1g01840.1 68414.m00103 expressed protein Length = 152 Score = 27.5 bits (58), Expect = 8.2 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 3/109 (2%) Frame = +1 Query: 187 LAHQVKGRTGLQQGLE-GRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTA 363 +A Q+ G Q L+ LR+ Q+L+AF S+ A + + + E ++ Sbjct: 20 MAQQIGTTVGQNQLLQISSLRIAHQRLSAFLASIPTAEAEKSFSSVEPMQLGE------- 72 Query: 364 EELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV--SSNVQETN 504 EE +A P E+ +A+ EK++ ++ +++L + + SS V ET+ Sbjct: 73 EEKGEAEPAEEERYSAI-EKVEEKMRECFIRNKRLKRPLSPSSAVVETS 120 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,911,447 Number of Sequences: 28952 Number of extensions: 191986 Number of successful extensions: 1061 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 1016 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1059 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1354097952 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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