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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0552
         (650 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g36070.1 68415.m04429 mitochondrial import inner membrane tra...    42   3e-04
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC...    39   0.003
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa...    33   0.12 
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa...    33   0.12 
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa...    33   0.12 
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa...    33   0.12 
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)...    33   0.22 
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:...    32   0.29 
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu...    32   0.29 
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr...    32   0.29 
At2g20510.1 68415.m02395 mitochondrial import inner membrane tra...    31   0.50 
At3g09980.1 68416.m01198 expressed protein contains Pfam profile...    31   0.66 
At2g35070.1 68415.m04302 expressed protein                             31   0.66 
At2g19410.1 68415.m02264 protein kinase family protein contains ...    31   0.88 
At4g27595.1 68417.m03964 protein transport protein-related low s...    30   1.2  
At5g46070.1 68418.m05665 guanylate-binding family protein contai...    30   1.5  
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf...    30   1.5  
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont...    30   1.5  
At3g50370.1 68416.m05508 expressed protein                             29   2.0  
At2g48160.1 68415.m06031 PWWP domain-containing protein                29   2.7  
At2g32240.1 68415.m03940 expressed protein contains Pfam profile...    29   2.7  
At2g27170.1 68415.m06029 structural maintenance of chromosomes (...    29   2.7  
At1g79830.1 68414.m09326 expressed protein weak similarity to TA...    29   2.7  
At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putati...    29   2.7  
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con...    29   3.5  
At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont...    28   4.7  
At3g58840.1 68416.m06558 expressed protein                             28   4.7  
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C...    28   4.7  
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C...    28   4.7  
At3g12360.1 68416.m01541 ankyrin repeat family protein contains ...    28   4.7  
At2g26570.1 68415.m03187 expressed protein contains Pfam profile...    28   4.7  
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida...    28   4.7  
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof...    28   4.7  
At5g61920.1 68418.m07773 hypothetical protein                          28   6.2  
At5g55140.1 68418.m06875 ribosomal protein L30 family protein co...    28   6.2  
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro...    28   6.2  
At3g49170.1 68416.m05374 pentatricopeptide (PPR) repeat-containi...    28   6.2  
At3g09550.1 68416.m01134 ankyrin repeat family protein contains ...    28   6.2  
At2g36410.2 68415.m04470 expressed protein contains Pfam profile...    28   6.2  
At2g36410.1 68415.m04469 expressed protein contains Pfam profile...    28   6.2  
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr...    28   6.2  
At5g40450.1 68418.m04905 expressed protein                             27   8.2  
At3g59080.1 68416.m06586 aspartyl protease family protein contai...    27   8.2  
At3g50100.1 68416.m05477 exonuclease family protein contains exo...    27   8.2  
At3g46990.1 68416.m05103 hypothetical protein contains Pfam prof...    27   8.2  
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu...    27   8.2  
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ...    27   8.2  
At1g01840.1 68414.m00103 expressed protein                             27   8.2  

>At2g36070.1 68415.m04429 mitochondrial import inner membrane
           translocase subunit TIM44, putative contains similarity
           to Swiss-Prot:O35857 import inner membrane translocase
           subunit TIM44, mitochondrial precursor [Mus musculus];
           contains Pfam domian PF04280: Mitochondrial import inner
           membrane, translocase subunit TIM44
          Length = 469

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
 Frame = +1

Query: 187 LAHQ--VKGRTGLQQGLEGRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERT 360
           L HQ  V  R GL QG       R    + F+K ++G   D+N + ++ +++ ++     
Sbjct: 21  LVHQRRVGARLGLLQGNGFASHRRFSVFSEFSKKIRGE-ADSNPEFQKTVKEFKER---- 75

Query: 361 AEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 498
           AEEL+    D++       EKL    Q    E++ +AKKVSS+V++
Sbjct: 76  AEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVKD 121


>At2g36640.1 68415.m04494 late embryogenesis abundant protein
           (ECP63) / LEA protein nearly identical to to LEA protein
           in group 3 [Arabidopsis thaliana] GI:1526424; contains
           Pfam profile PF02987: Late embryogenesis abundant
           protein
          Length = 448

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 18/76 (23%), Positives = 39/76 (51%)
 Frame = +1

Query: 283 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 462
           L G   +A GKA E  + +++N+E+  E  R+   ++      L+E+  A  Q   Q+++
Sbjct: 278 LSGKTEEAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTR 337

Query: 463 KLAKKVSSNVQETNEN 510
           +  +  +   +ET ++
Sbjct: 338 ESTESGAQKAEETKDS 353


>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
           domains PF04433: SWIRM domain, PF00249: Myb-like
           DNA-binding domain and PF00569: Zinc finger, ZZ type
          Length = 986

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 450
           K LQ  L D N  + E  + S+  + ++A +  +  A  DVE   T   EK    V  TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765

Query: 451 QESQKLAKKVSSN 489
            E  +LAK+  +N
Sbjct: 766 GEKVQLAKEEGAN 778


>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
           domains PF04433: SWIRM domain, PF00249: Myb-like
           DNA-binding domain and PF00569: Zinc finger, ZZ type
          Length = 983

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 450
           K LQ  L D N  + E  + S+  + ++A +  +  A  DVE   T   EK    V  TV
Sbjct: 704 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 763

Query: 451 QESQKLAKKVSSN 489
            E  +LAK+  +N
Sbjct: 764 GEKVQLAKEEGAN 776


>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
           domains PF04433: SWIRM domain, PF00249: Myb-like
           DNA-binding domain and PF00569: Zinc finger, ZZ type
          Length = 985

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 450
           K LQ  L D N  + E  + S+  + ++A +  +  A  DVE   T   EK    V  TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765

Query: 451 QESQKLAKKVSSN 489
            E  +LAK+  +N
Sbjct: 766 GEKVQLAKEEGAN 778


>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
           domains PF04433: SWIRM domain, PF00249: Myb-like
           DNA-binding domain and PF00569: Zinc finger, ZZ type
          Length = 985

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 450
           K LQ  L D N  + E  + S+  + ++A +  +  A  DVE   T   EK    V  TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765

Query: 451 QESQKLAKKVSSN 489
            E  +LAK+  +N
Sbjct: 766 GEKVQLAKEEGAN 778


>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
           Similar to Arabidopsis luminal binding protein
           (gb|D89342); contains Pfam domain PF00012: dnaK protein
          Length = 678

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
 Frame = +1

Query: 235 GRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 414
           G L+V+A+  +  AK+ Q ++   N K +   E+  + I R AEE  +    +++   A 
Sbjct: 529 GILQVKAE--DKVAKTSQ-SITITNDKGRLTEEEIEEMI-REAEEFAEEDKIMKEKIDA- 583

Query: 415 REKLQAAVQN---TVQESQKLAKKVSSNVQETNE 507
           R KL+  V N   TV + +KLAKK+S   +E  E
Sbjct: 584 RNKLETYVYNMKSTVADKEKLAKKISDEDKEKME 617


>At5g20490.1 68418.m02435 myosin, putative similar to myosin
            (GI:433663) [Arabidopsis thaliana]; myosin-like protein
            my5, common sunflower, PIR:T14279
          Length = 1545

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = +1

Query: 322  EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-QKLAKKVSSNV 492
            EAL+ S Q   + AE LRKA  + E   + L  +L+ A +   Q  ES Q+L +K+S++ 
Sbjct: 997  EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056

Query: 493  QE 498
             E
Sbjct: 1057 SE 1058


>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
           putative / LEA protein, putative similar to SP|P13934
           Late embryogenesis abundant protein 76 (LEA 76)
           {Brassica napus}; contains Pfam profile PF02987: Late
           embryogenesis abundant protein
          Length = 225

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +1

Query: 286 QGALGDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 462
           Q   G A G  ++  E+ R    +TA+  + KAH   +       +  QAA Q   + +Q
Sbjct: 18  QEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQ 77

Query: 463 KLAKKVSSNVQETNE 507
              +K S   Q   +
Sbjct: 78  SAKEKTSQTAQTAQQ 92



 Score = 29.5 bits (63), Expect = 2.0
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
 Frame = +1

Query: 298 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAK 474
           G+  GKA+E   Q+   +   AEE R K     +       E  Q+A   T Q +Q   +
Sbjct: 11  GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70

Query: 475 KVSSNVQETNE 507
           K     Q   E
Sbjct: 71  KAHETAQSAKE 81


>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
           protein / kinesin motor family protein similar to
           kinesin-like protein GB:CAB41097 GI:5541717 from
           [Arabidopsis thaliana]; contains Pfam profiles PF00225:
           Kinesin motor domain, PF00514:
           Armadillo/beta-catenin-like repeat
          Length = 894

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
 Frame = +1

Query: 229 LEGRLRVRAQ-QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 405
           +E  L+++ +    + +K L+  L     + +  L+    ++ER   + +    +VEKN 
Sbjct: 402 VENMLKIKEEFDYKSLSKKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNF 461

Query: 406 TALREKLQAAVQNTVQES-QKLAKKVSSNVQETNEN 510
               EK +   Q    ES +KL +K+ SN Q  +EN
Sbjct: 462 AEALEKEKLKCQMEYMESVKKLEEKLISN-QRNHEN 496


>At2g20510.1 68415.m02395 mitochondrial import inner membrane
           translocase subunit TIM44, putative contains similarity
           to Swiss-Prot:O35857 import inner membrane translocase
           subunit TIM44, mitochondrial precursor [Mus musculus];
           contains Pfam domian PF04280: Mitochondrial import inner
           membrane, translocase subunit TIM44
          Length = 472

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 18/81 (22%), Positives = 39/81 (48%)
 Frame = +1

Query: 256 QQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 435
           ++ + F +  +   G+A+   +   E++ + ++   EE +    D++       EKL   
Sbjct: 43  RRFSVFTEFSKNIRGEAHSNPE--FERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQ 100

Query: 436 VQNTVQESQKLAKKVSSNVQE 498
                 E++  AKKVSS+V++
Sbjct: 101 ADGVWTEAESAAKKVSSSVKD 121


>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
           PF04949: Family of unknown function (DUF662)
          Length = 178

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 21/75 (28%), Positives = 39/75 (52%)
 Frame = +1

Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 426
           V ++QL A    L G++  ++  +KE  E SR  +       R    ++EK    +RE++
Sbjct: 19  VHSRQLGA---QLSGSMSFSSQMSKEDEEMSRTALSA----FRAKEEEIEKKKMEIRERV 71

Query: 427 QAAVQNTVQESQKLA 471
           QA +    +E+++LA
Sbjct: 72  QAQLGRVEEETKRLA 86


>At2g35070.1 68415.m04302 expressed protein
          Length = 158

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 208 RTGLQQGLEGRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ-NIERTAEELRKAH 384
           + G+ + LE  + V + Q  A   ++        GK K  + +S +    R AEE RK  
Sbjct: 30  KLGMVKALEA-INVPSTQAEALTGAITSGFESVMGKVKADIAKSEEYKSTRVAEEFRKMR 88

Query: 385 PDVEK 399
            D+EK
Sbjct: 89  ADIEK 93


>At2g19410.1 68415.m02264 protein kinase family protein contains
           Pfam profile: PF00069 Eukaryotic protein kinase domain
          Length = 801

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 209 AQDFSKAWKDGSESVRNSSTPSPRVSRERSETRTARPRRL 328
           A DF + W     ++R+ + P PR S E    R+A  R L
Sbjct: 190 AHDFLRDWAASFHTLRSPTLPDPRQSTEAGTRRSASAREL 229


>At4g27595.1 68417.m03964 protein transport protein-related low
           similarity to SP|P25386 Intracellular protein transport
           protein USO1 {Saccharomyces cerevisiae}
          Length = 1212

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = +1

Query: 301 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 471
           D   K KE+L   E   QNI + AEELR    D  K      E+L AA ++ V++  KL 
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702

Query: 472 KKVSSNVQETNE 507
               S VQE  E
Sbjct: 703 ----STVQEAEE 710


>At5g46070.1 68418.m05665 guanylate-binding family protein contains
            Pfam domains PF02263: Guanylate-binding protein,
            N-terminal domain and PF02841: Guanylate-binding protein,
            C-terminal domain
          Length = 1060

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +1

Query: 343  QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 474
            +++E+  +E RKAH    + A AL  +LQAA  +     Q+LA+
Sbjct: 876  KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 919


>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
           profile: PF03637 mob1/phocein family
          Length = 217

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +1

Query: 337 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 489
           S  N+ RT    ++ HP+ +   + +RE +     + ++E+ +L + V  N
Sbjct: 9   SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59


>At1g72100.1 68414.m08334 late embryogenesis abundant
           domain-containing protein / LEA domain-containing
           protein low similarity to embryogenic gene [Betula
           pendula] GI:4539485; contains Pfam profile PF02987: Late
           embryogenesis abundant protein
          Length = 480

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 313 KAKEALEQSRQNIERTAEEL-RKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 489
           KA +A E+ R+      E + +KAH   E+    +REK Q   +    +S+   ++V + 
Sbjct: 233 KAHDAKEKVREKAHDVKETVAQKAHESKERAKDRVREKAQELKETATHKSKNAWERVKNG 292

Query: 490 VQE 498
            +E
Sbjct: 293 ARE 295


>At3g50370.1 68416.m05508 expressed protein
          Length = 2179

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +1

Query: 331 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESQKLAKK 477
           EQ R    R AEELRK+  + EK+   + E  + QAA Q  ++  +K++++
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580


>At2g48160.1 68415.m06031 PWWP domain-containing protein
          Length = 1366

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +1

Query: 4    PVRISSALSLSTAHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 162
            P+R++  LS ST H+ G +    S ++L  S P++DG+  + R    H  PH   P
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239


>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
           PF04508 viral A-type inclusion protein repeat
          Length = 775

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
 Frame = +1

Query: 217 LQQGLEGRLRVRAQ-QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDV 393
           LQ   E  L      QL    + L+G +G  + + + AL++  + IER  ++        
Sbjct: 328 LQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRLEEAIERFNQK-------- 379

Query: 394 EKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 507
           E  ++ L EKL+   +N ++E +KLA + +S V +T +
Sbjct: 380 ETESSDLVEKLKTH-ENQIEEYKKLAHE-ASGVADTRK 415


>At2g27170.1 68415.m06029 structural maintenance of chromosomes
           (SMC) family protein similar to basement
           membrane-associated chondroitin proteoglycan Bamacan
           [Rattus norvegicus] GI:1785540; contains Pfam profile
           PF02463: RecF/RecN/SMC N terminal domain. No suitalble
           start codon was identified.
          Length = 1207

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +1

Query: 256 QQLNAFAKSLQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 432
           QQL+   KSL+  + D     A+E LEQ      + +EE  K +  VEK A    + L  
Sbjct: 214 QQLDKQRKSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEK-AQDDSKSLDE 272

Query: 433 AVQNTVQESQKLAK-KVSSNVQET 501
           +++   +E Q L K K +   Q+T
Sbjct: 273 SLKELTKELQTLYKEKETVEAQQT 296


>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
           element modulatory factor (TMF) (Swiss-Prot:P82094)
           [Homo sapiens]
          Length = 927

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
 Frame = +1

Query: 253 AQQLNAFAKSLQGALGDANGKAKEALEQ---SRQNIERTAEELRKAHPDVEK----NATA 411
           A  L   A  L+  + +   K K+ L++     + I++  E  + +  D+E+    N++A
Sbjct: 722 ADTLEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSA 781

Query: 412 LREKLQAAVQNTVQESQKLAKKVS 483
           + E+L  A QN+  E+ K ++K S
Sbjct: 782 VSEQLPIARQNSAFENDKFSEKRS 805


>At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putative
           / HD-ZIP transcription factor, putative similar to
           homeodomain leucine zipper protein GI:5006851 from
           [Oryza sativa]
          Length = 206

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 554 HPGGDQEDPGGRQRQAVSVDIELSHLINISFI 649
           H   D  + GGR+R+ + +  E SHL+  SFI
Sbjct: 55  HVNEDDSNSGGRRRKKLRLTKEQSHLLEESFI 86


>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
           contains Pfam profile PF00787: PX domain
          Length = 723

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
 Frame = +1

Query: 262 LNAFAKSLQGALGDANGKAKEALEQS------RQN-IERTAEELRKAHPDVEKNATALRE 420
           LN     L+G L     ++KE LEQ+      R N ++   EELR+   ++E    +  +
Sbjct: 428 LNKKVNDLEGELETTKQRSKENLEQAIMSERERFNQMQWDMEELRQKSYEMEMKLKSRED 487

Query: 421 ---KLQAAVQNTVQESQKLAKKVSSNVQETNE 507
                +  VQ+T+ E   L+K++ +  Q+  +
Sbjct: 488 GSSHAEPTVQSTISEKHVLSKELDARKQQLED 519


>At4g21020.1 68417.m03041 late embryogenesis abundant
           domain-containing protein / LEA domain-containing
           protein low similarity to SP|P23283 Desiccation-related
           protein {Craterostigma plantagineum}; contains Pfam
           profile PF02987: Late embryogenesis abundant protein
          Length = 266

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/69 (21%), Positives = 33/69 (47%)
 Frame = +1

Query: 304 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 483
           A   A  A E+++   ERT +++ +        A   +EK +   ++T+  +++ A+   
Sbjct: 114 AKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAK 173

Query: 484 SNVQETNEN 510
             V+E  E+
Sbjct: 174 EKVKEYGED 182


>At3g58840.1 68416.m06558 expressed protein
          Length = 318

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 486
           KA   + +  +  E+ AE LRK   +VEK    L  K+       V+E ++ +KK+ S
Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVL---EVREMEEKSKKLRS 182


>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
           (PP2C6) identical to Ser/Thr protein phosphatase 2C
           (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
           protein phosphatase 2C (GI:3608412) [Mesembryanthemum
           crystallinum]; contains Pfam PF00481 : Protein
           phosphatase 2C domain; contains TIGRFAM TIGR01573 :
           CRISPR-associated protein Cas2
          Length = 384

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 468
           KA +   +   +IE   EELR  HPD + N   L+ K+   V+  +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237


>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
           (PP2C6) identical to Ser/Thr protein phosphatase 2C
           (PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
           protein phosphatase 2C (GI:3608412) [Mesembryanthemum
           crystallinum]; contains Pfam PF00481 : Protein
           phosphatase 2C domain; contains TIGRFAM TIGR01573 :
           CRISPR-associated protein Cas2
          Length = 384

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 313 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 468
           KA +   +   +IE   EELR  HPD + N   L+ K+   V+  +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237


>At3g12360.1 68416.m01541 ankyrin repeat family protein contains
           ankyrin repeat domains, Pfam:PF00023
          Length = 590

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +1

Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 408
           +RA +LN     L+  +          LEQ+++   N+   ++ELRK H +   NAT
Sbjct: 363 LRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHREGINNAT 419


>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
           PF05701: Plant protein of unknown function (DUF827);
           weak similarity to merozoite surface protein 3 alpha
           (GI:27596802) [Plasmodium vivax]
          Length = 807

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +1

Query: 274 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 453
           AKSL     +   KAKE  EQ++         L  A  ++E  A    E+L  A    ++
Sbjct: 563 AKSLAEVAREELRKAKEEAEQAKAGASTMESRLFAAQKEIE--AAKASERLALAAIKALE 620

Query: 454 ESQKLAK 474
           ES+   K
Sbjct: 621 ESESTLK 627


>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
           putative / ACC oxidase, putative nearly identical to ACC
           oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
          Length = 320

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 122 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 238
           D    IE  TK+ +KT  EQ+FN + KSK   +     +D
Sbjct: 47  DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86


>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
           PF05701: Plant protein of unknown function (DUF827)
          Length = 752

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = +1

Query: 274 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 453
           AKSL  A  +   KAKE  ++++  +     +L ++  ++E  A+   EKL  A    +Q
Sbjct: 512 AKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEME--ASRASEKLALAAIKALQ 569

Query: 454 ESQ 462
           E++
Sbjct: 570 ETE 572


>At5g61920.1 68418.m07773 hypothetical protein
          Length = 238

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
 Frame = +1

Query: 322 EALEQSRQNIERTAEELRKAHPDVEKNATALREKL------QAAVQNTVQESQKLAKKVS 483
           E+LE S Q +ER  EE ++   + E+  +   EKL      +  +   V+  +KL  ++S
Sbjct: 170 ESLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIS 229

Query: 484 SNVQETNEN 510
           +   +  EN
Sbjct: 230 TARNKAVEN 238


>At5g55140.1 68418.m06875 ribosomal protein L30 family protein
           contains similarity to 50S ribosomal protein L30
          Length = 109

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
 Frame = +1

Query: 217 LQQGLEGRLRVRAQQLNAFA--KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD 390
           L +GL G  ++  + L A    +  +  L   N   +  ++Q ++ +    EE+  A  +
Sbjct: 23  LVRGLPGTRKLHRRTLEAMGLRRCHRTVLHSNNSSIRGMIDQVKRMVVVETEEMYNARKE 82

Query: 391 VEKNATALREKLQAAVQNTVQESQKLA 471
            E N  ALR  L  +  +   +S  ++
Sbjct: 83  AEANHKALRPPLVVSHSSPATDSSNMS 109


>At5g07780.1 68418.m00890 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 464

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -2

Query: 379 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 275
           P   PRPC+R   +     P     + RALPG  W
Sbjct: 61  PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95


>At3g49170.1 68416.m05374 pentatricopeptide (PPR) repeat-containing
           protein contains INTERPRO:IPR002885 PPR repeats
          Length = 850

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 318 GLAVRVSERSLETLGEGVELLRTDSEPSFQALLKSCASFDLVSE 187
           G A+RV E   + + EGV+     +E ++ A+L +C+   LVSE
Sbjct: 554 GFAIRVLETFNQMIEEGVK----PNEVTYVAILSACSHVGLVSE 593


>At3g09550.1 68416.m01134 ankyrin repeat family protein contains
           ankyrin repeat domains, Pfam:PF00023
          Length = 436

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +1

Query: 247 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 408
           ++A +LN     L+  + +        LEQ+R+   N++  A+ELRK H     NAT
Sbjct: 206 LKANELNQPRDELRKTVTEIKKDVHTQLEQTRKTNKNVDGIAKELRKLHRAGINNAT 262


>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
           PF04949: Family of unknown function (DUF662)
          Length = 192

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +1

Query: 310 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 471
           G    +   SR++ E T   L   R    ++EK    +RE++QA +    QE+++L+
Sbjct: 45  GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101


>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
           PF04949: Family of unknown function (DUF662)
          Length = 195

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +1

Query: 310 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 471
           G    +   SR++ E T   L   R    ++EK    +RE++QA +    QE+++L+
Sbjct: 45  GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101


>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
           domains; weak similarity to HPSR2 - heavy chain
           potential motor protein (GI:871048) [Giardia
           intestinalis]
          Length = 702

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 286 QGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 423
           Q AL +    + +AL +     ER AEE R AH +  K A   RE+
Sbjct: 369 QAALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413


>At5g40450.1 68418.m04905 expressed protein
          Length = 2910

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/69 (23%), Positives = 34/69 (49%)
 Frame = +1

Query: 301  DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 480
            D+NG   E ++Q   NI    EE+  A P    +  ++ +  +  +++  + S++ +K V
Sbjct: 824  DSNGAEAEQIDQ---NITNETEEILVAKPVSLLDVKSVEQMQKPKLESPSEVSEETSKTV 880

Query: 481  SSNVQETNE 507
               ++E  E
Sbjct: 881  DEKIEEKPE 889


>At3g59080.1 68416.m06586 aspartyl protease family protein contains
           similarity to CND41, chloroplast nucleoid DNA binding
           protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
           profile PF00026: Eukaryotic aspartyl protease
          Length = 535

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 352 RCSASTVPKPPWPCRSRLRALPGDSW 275
           RC+  + P PP PC+S  ++ P   W
Sbjct: 229 RCNLVSSPDPPMPCKSDNQSCPYYYW 254


>At3g50100.1 68416.m05477 exonuclease family protein contains
           exonuclease domain, Pfam:PF00929
          Length = 406

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +1

Query: 256 QQLNAFAKSLQGA-LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 423
           Q L+   K LQ   L   NG  KE L    +N +  ++  R++H D+ +  T  ++K
Sbjct: 11  QVLDELVKLLQSRDLRGENGNWKEFLHVYDKNADSPSDPSRRSHEDLVQFLTTFKKK 67


>At3g46990.1 68416.m05103 hypothetical protein contains Pfam profile
           PF05340: Protein of unknown function (DUF740)
          Length = 547

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +2

Query: 152 KEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVRNSSTPSPRVSRERSETRTARPRRLW 331
           KE    L ++  + T +K   + S +   G  + R+SS   PR+S +       +PR  W
Sbjct: 170 KEIASVLSRRLKNFTLNKRNDEKSDSRFAGIVNGRHSSDVDPRLSFDGGRISFEKPRSSW 229

Query: 332 N 334
           +
Sbjct: 230 D 230


>At1g79280.1 68414.m09242 expressed protein weak similarity to
            Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
          Length = 2111

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/64 (23%), Positives = 34/64 (53%)
 Frame = +1

Query: 316  AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 495
            AKE +E+ R  +E +   + +     + N TAL++ +++A +N   E++K  + + + + 
Sbjct: 970  AKEEIEKLRGEVESSKSHMLQYKSIAQVNETALKQ-MESAHENFRLEAEKRQRSLEAELV 1028

Query: 496  ETNE 507
               E
Sbjct: 1029 SLRE 1032


>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
           similar to BEL1-like homeodomain 1 (GI:13877517)
           [Arabidopsis thaliana]; similar to homeodomain protein
           GI:7239157 from (Malus domestica); contains weak hit to
           Pfam profile PF00046: Homeobox domain
          Length = 538

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +1

Query: 235 GRLRVRAQQLNAFAKSLQGALG----DANGKAKEALEQSRQNIERTAEELRKAHPDVEKN 402
           G+ +++    N+ +K ++G  G    D+NGK+ E     R+ ++    +L     +V+K 
Sbjct: 193 GKKKMKVNDFNSGSKEIEGGGGELSSDSNGKSIELSTIEREELQNKKNKLLTMVDEVDKR 252

Query: 403 ATALREKLQA 432
                 +++A
Sbjct: 253 YNQYYHQMEA 262


>At1g01840.1 68414.m00103 expressed protein
          Length = 152

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
 Frame = +1

Query: 187 LAHQVKGRTGLQQGLE-GRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTA 363
           +A Q+    G  Q L+   LR+  Q+L+AF  S+  A  + +  + E ++          
Sbjct: 20  MAQQIGTTVGQNQLLQISSLRIAHQRLSAFLASIPTAEAEKSFSSVEPMQLGE------- 72

Query: 364 EELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV--SSNVQETN 504
           EE  +A P  E+  +A+ EK++  ++     +++L + +  SS V ET+
Sbjct: 73  EEKGEAEPAEEERYSAI-EKVEEKMRECFIRNKRLKRPLSPSSAVVETS 120


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,911,447
Number of Sequences: 28952
Number of extensions: 191986
Number of successful extensions: 1061
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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