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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0551
         (738 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||...    30   0.30 
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po...    29   0.91 
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac...    27   3.7  
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam...    27   3.7  
SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces pombe...    26   6.4  
SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|ch...    26   6.4  
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe...    25   8.5  
SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyce...    25   8.5  
SPCC613.03 |||conserved fungal protein|Schizosaccharomyces pombe...    25   8.5  
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual      25   8.5  

>SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 320

 Score = 30.3 bits (65), Expect = 0.30
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 526 AHSLKASSTTVL*HTVLYNSLLHGWYSIQRNEV 624
           +HSLK    ++L   VL +SLLH WYS+ +  +
Sbjct: 262 SHSLKLKDGSIL---VLRSSLLHQWYSLPKQSI 291


>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1396

 Score = 28.7 bits (61), Expect = 0.91
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +3

Query: 327 LLIGACFYNMANDGTEMFNHLKLCVGIVIFFA 422
           L++G+ FYN+ N+ +E+++   +    ++F A
Sbjct: 444 LMLGSLFYNLRNESSELYSRGSVLSNAIVFTA 475


>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
           Lac1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 384

 Score = 26.6 bits (56), Expect = 3.7
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
 Frame = +3

Query: 258 MLLQISRNRQGLWIQLLHHLMCGLLIGACFY-NMANDGTEMF-----NHLKLCVGIVIFF 419
           ++LQ+ + R+     ++HH++  LLIG  +Y +    G  +F     + + L +   + +
Sbjct: 211 LILQLEKPRKDFKELVVHHIITLLLIGLSYYFHFTWIGLAVFITMDTSDIWLALSKCLNY 270

Query: 420 AYTQIMVPVLVYPQEVKLVKKEYFN 494
             T I+ P+ V    V +  + Y N
Sbjct: 271 VNTVIVYPIFVIFVFVWIYMRHYLN 295


>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 543

 Score = 26.6 bits (56), Expect = 3.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 413 YHNSHTQLQVVKHLCSVVGHIIE 345
           YHN H Q+Q   +LC +   +I+
Sbjct: 487 YHNEHIQVQEDNYLCPIENSLID 509


>SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 349

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 598 WYSIQRNEVHNVLCRGEHGVFSLRRIGLAIGSVFNVTNG 714
           WYS     V++  C  +  +  L  IG AIG + N   G
Sbjct: 292 WYSFFPRYVYSTNCMNDSLLTRLEGIGNAIGRIGNAFRG 330


>SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 204

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 288 GLWIQLLHHLMCGLLIGACF 347
           G+W+++ HHL  GLL   CF
Sbjct: 35  GVWVEIYHHLEKGLL-QQCF 53


>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 848

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 601 YSIQRN-EVHNVLCRGEHGVFSLRRIGLAIGSVFNVTN 711
           Y +Q N  +HNV   G+H  F L   G  IG  F ++N
Sbjct: 452 YGMQHNVTIHNVSTIGKHPSFPLSNNGELIGE-FTLSN 488


>SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 344

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -1

Query: 369 FRRWPYYRSMLLSEARTSSDVIVGSKALAYSLRSAATSFEKYT 241
           F  W +YR  ++S+   + +  +  K + Y+  + AT+F  ++
Sbjct: 144 FHGW-HYRRYVVSQIERAGNCSLAKKEMEYTTSAIATNFSNFS 185


>SPCC613.03 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 189

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +1

Query: 535 LKASSTTVL*HTVLYNSLLHGWYSIQRNEVHNVLCRGEHGVFSLRRIG 678
           +K S+   L  T+L+ S   GW      + H++    +   F L  +G
Sbjct: 1   MKFSTVGFLFSTILFKSAFAGWMDTHMKDEHHIDKYTDESFFRLHDLG 48


>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1489

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 384  HLKLCVGIVIFFAYTQIMVPVLVYPQEVKLV 476
            H +   G++  F Y   + PVLV P   KLV
Sbjct: 1023 HKEEIFGVIGKFVYWAYVAPVLVSPDNFKLV 1053


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,148,250
Number of Sequences: 5004
Number of extensions: 66626
Number of successful extensions: 196
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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