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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0551
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306...    42   5e-04
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831           31   0.72 
10_08_0076 + 14685364-14686468,14686521-14686540,14686614-146867...    30   1.7  
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944...    30   1.7  
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680           29   2.9  
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309...    29   2.9  
11_04_0096 + 13435988-13436803,13436880-13437053,13437673-134378...    29   5.1  
05_07_0173 + 28140484-28140869,28141079-28141481,28141719-281417...    29   5.1  
09_04_0489 - 18031187-18031579,18032033-18034030,18034102-180342...    28   8.9  
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445...    28   8.9  

>03_01_0393 -
           3062859-3062972,3063027-3063311,3063472-3063759,
           3063844-3064161,3064232-3064415,3064504-3064659,
           3066394-3066620,3066734-3066804,3067090-3067534
          Length = 695

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +2

Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRF 625
           + +L+ Y+ A T S LP+ LF  ++F  IVYFMAG+      F
Sbjct: 601 MYKLSAYFLARTTSDLPLDLFLPVIFMVIVYFMAGLKATAAHF 643


>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
          Length = 757

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGI 604
           + +L+ Y+AA T + LP++L     F  I+Y+M G+
Sbjct: 577 MYRLSSYFAARTAADLPMELALPTAFVVILYWMGGL 612


>10_08_0076 +
           14685364-14686468,14686521-14686540,14686614-14686749,
           14687537-14687664,14687742-14687855
          Length = 500

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +1

Query: 55  PETEIMLTNEKCVYKVQSYSNTASMCSLSSQLSGIN-NSSAWMKIQKPSDYDISYST 222
           P   ++  + +  Y+ Q++ N   +   +S L+G+N   + W      S+YD+SYS+
Sbjct: 365 PPNHVLNLSHQVYYENQNF-NVLLLLIKNSDLTGVNLKKTGWQGPSLVSEYDVSYSS 420


>06_03_0710 +
           23792138-23792293,23792974-23793257,23794344-23794499,
           23795318-23795804,23795864-23796181,23796773-23797165,
           23797752-23798021
          Length = 687

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +2

Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSE 670
           + +L+ YYA+ TV      +   +LF+ I+YFMA +   V  F        ++ L S+
Sbjct: 505 MYRLSAYYASSTVCDAVPHVVYPVLFTAILYFMADLRRTVPCFCLTLLATLLIVLTSQ 562


>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
          Length = 612

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSE 670
           L+ Y+ +     LP++L     F+ IVY MAG+  +   F    AV     LV+E
Sbjct: 449 LSSYFMSRMAGDLPMELALPAAFTVIVYLMAGLNPSPAAFALTLAVILSYVLVAE 503


>05_04_0148 -
           18426903-18427106,18430516-18430594,18430752-18430935,
           18431020-18431063,18432028-18432165,18432713-18434511
          Length = 815

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +2

Query: 503 QLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
           +L+ Y  A  +   P  L  ++LFS  VYF+AG+      F  F     ++ L++
Sbjct: 473 RLSSYVVANALVFAPCLLAVSLLFSAPVYFLAGLRATTQAFACFALAVWLIVLMA 527


>11_04_0096 +
           13435988-13436803,13436880-13437053,13437673-13437834,
           13438548-13438690,13439059-13439134,13439231-13439403,
           13439482-13439563,13439949-13440026,13440369-13440461,
           13441026-13441187,13441225-13441530,13442265-13442369,
           13443097-13443243
          Length = 838

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAG 601
           P+YAA++ S +P +LF     ST+ Y +AG
Sbjct: 101 PHYAAISESNVPAELFPQC--STVEYLLAG 128


>05_07_0173 + 28140484-28140869,28141079-28141481,28141719-28141781,
            28142350-28142535,28144695-28145076,28145689-28145780,
            28145988-28146737,28146969-28147100,28147149-28147247,
            28147977-28148132,28150187-28150317,28150798-28151254,
            28151327-28151668,28152137-28153001,28153112-28153170,
            28153806-28154261,28154835-28154873,28155016-28155201
          Length = 1727

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 22/114 (19%)
 Frame = +1

Query: 1    EPLPQMQLKVCYQAEDNAPETEIMLTNEK--------------CVY----KVQSYSNTAS 126
            +PLP+++   CY+ E   P  ++ L  EK              C+     +     + +S
Sbjct: 1332 KPLPKIESDFCYRREKGFPGIQVALNQEKNQTSNLMHALHDEECLIFTLAREMGSKDVSS 1391

Query: 127  MCSLSSQLSGINNSSAWMKIQKPSDYDISYSTSYFDQFSILLKG----CCCRSQ 276
                 + LS +NNSS+   +   S  + SYS   +D  +I  K      CC+ +
Sbjct: 1392 QVESQNMLSYLNNSSSCRCLLSASHLERSYSGWPWDAMNIYAKQLPSLSCCKDE 1445


>09_04_0489 -
           18031187-18031579,18032033-18034030,18034102-18034234,
           18035360-18036108
          Length = 1090

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +1

Query: 43  EDNAPETEIM---LTNEKCVYKVQSYSNTASMCSLSSQLSGINNSSAWMKIQKPSDYDIS 213
           EDNA E  +    +T+    + V++YSN  +     S L+ +NN+     I   +DY   
Sbjct: 789 EDNAKEQLVNPRNITSNDAGFDVEAYSNIFNGAITESSLAQLNNA-----INMKADYSSC 843

Query: 214 YSTS 225
           YS S
Sbjct: 844 YSLS 847


>01_05_0658 - 24043655-24043945,24044003-24044257,24044359-24044530,
            24044617-24044844,24045688-24045821,24045908-24045991,
            24046202-24046492,24046571-24046903,24047002-24047246,
            24047476-24047742,24048305-24048465,24048556-24048872,
            24048966-24049247,24049325-24049626,24049699-24049789,
            24049881-24049934,24050028-24050104,24050192-24050367,
            24051331-24051540,24051626-24052029
          Length = 1457

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 512  PYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITF 634
            PY       + P  L  ++++S IVY M G  + V +F  +
Sbjct: 1271 PYAFGQVAIEFPYTLVQSVIYSIIVYSMIGFQWTVAKFFWY 1311


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,551,438
Number of Sequences: 37544
Number of extensions: 394183
Number of successful extensions: 983
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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