BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0551 (738 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 42 5e-04 08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 31 0.72 10_08_0076 + 14685364-14686468,14686521-14686540,14686614-146867... 30 1.7 06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 30 1.7 11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 29 2.9 05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 29 2.9 11_04_0096 + 13435988-13436803,13436880-13437053,13437673-134378... 29 5.1 05_07_0173 + 28140484-28140869,28141079-28141481,28141719-281417... 29 5.1 09_04_0489 - 18031187-18031579,18032033-18034030,18034102-180342... 28 8.9 01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445... 28 8.9 >03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759, 3063844-3064161,3064232-3064415,3064504-3064659, 3066394-3066620,3066734-3066804,3067090-3067534 Length = 695 Score = 41.9 bits (94), Expect = 5e-04 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRF 625 + +L+ Y+ A T S LP+ LF ++F IVYFMAG+ F Sbjct: 601 MYKLSAYFLARTTSDLPLDLFLPVIFMVIVYFMAGLKATAAHF 643 >08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 Length = 757 Score = 31.5 bits (68), Expect = 0.72 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGI 604 + +L+ Y+AA T + LP++L F I+Y+M G+ Sbjct: 577 MYRLSSYFAARTAADLPMELALPTAFVVILYWMGGL 612 >10_08_0076 + 14685364-14686468,14686521-14686540,14686614-14686749, 14687537-14687664,14687742-14687855 Length = 500 Score = 30.3 bits (65), Expect = 1.7 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +1 Query: 55 PETEIMLTNEKCVYKVQSYSNTASMCSLSSQLSGIN-NSSAWMKIQKPSDYDISYST 222 P ++ + + Y+ Q++ N + +S L+G+N + W S+YD+SYS+ Sbjct: 365 PPNHVLNLSHQVYYENQNF-NVLLLLIKNSDLTGVNLKKTGWQGPSLVSEYDVSYSS 420 >06_03_0710 + 23792138-23792293,23792974-23793257,23794344-23794499, 23795318-23795804,23795864-23796181,23796773-23797165, 23797752-23798021 Length = 687 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSE 670 + +L+ YYA+ TV + +LF+ I+YFMA + V F ++ L S+ Sbjct: 505 MYRLSAYYASSTVCDAVPHVVYPVLFTAILYFMADLRRTVPCFCLTLLATLLIVLTSQ 562 >11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 Length = 612 Score = 29.5 bits (63), Expect = 2.9 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +2 Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSE 670 L+ Y+ + LP++L F+ IVY MAG+ + F AV LV+E Sbjct: 449 LSSYFMSRMAGDLPMELALPAAFTVIVYLMAGLNPSPAAFALTLAVILSYVLVAE 503 >05_04_0148 - 18426903-18427106,18430516-18430594,18430752-18430935, 18431020-18431063,18432028-18432165,18432713-18434511 Length = 815 Score = 29.5 bits (63), Expect = 2.9 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +2 Query: 503 QLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 +L+ Y A + P L ++LFS VYF+AG+ F F ++ L++ Sbjct: 473 RLSSYVVANALVFAPCLLAVSLLFSAPVYFLAGLRATTQAFACFALAVWLIVLMA 527 >11_04_0096 + 13435988-13436803,13436880-13437053,13437673-13437834, 13438548-13438690,13439059-13439134,13439231-13439403, 13439482-13439563,13439949-13440026,13440369-13440461, 13441026-13441187,13441225-13441530,13442265-13442369, 13443097-13443243 Length = 838 Score = 28.7 bits (61), Expect = 5.1 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +2 Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAG 601 P+YAA++ S +P +LF ST+ Y +AG Sbjct: 101 PHYAAISESNVPAELFPQC--STVEYLLAG 128 >05_07_0173 + 28140484-28140869,28141079-28141481,28141719-28141781, 28142350-28142535,28144695-28145076,28145689-28145780, 28145988-28146737,28146969-28147100,28147149-28147247, 28147977-28148132,28150187-28150317,28150798-28151254, 28151327-28151668,28152137-28153001,28153112-28153170, 28153806-28154261,28154835-28154873,28155016-28155201 Length = 1727 Score = 28.7 bits (61), Expect = 5.1 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 22/114 (19%) Frame = +1 Query: 1 EPLPQMQLKVCYQAEDNAPETEIMLTNEK--------------CVY----KVQSYSNTAS 126 +PLP+++ CY+ E P ++ L EK C+ + + +S Sbjct: 1332 KPLPKIESDFCYRREKGFPGIQVALNQEKNQTSNLMHALHDEECLIFTLAREMGSKDVSS 1391 Query: 127 MCSLSSQLSGINNSSAWMKIQKPSDYDISYSTSYFDQFSILLKG----CCCRSQ 276 + LS +NNSS+ + S + SYS +D +I K CC+ + Sbjct: 1392 QVESQNMLSYLNNSSSCRCLLSASHLERSYSGWPWDAMNIYAKQLPSLSCCKDE 1445 >09_04_0489 - 18031187-18031579,18032033-18034030,18034102-18034234, 18035360-18036108 Length = 1090 Score = 27.9 bits (59), Expect = 8.9 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = +1 Query: 43 EDNAPETEIM---LTNEKCVYKVQSYSNTASMCSLSSQLSGINNSSAWMKIQKPSDYDIS 213 EDNA E + +T+ + V++YSN + S L+ +NN+ I +DY Sbjct: 789 EDNAKEQLVNPRNITSNDAGFDVEAYSNIFNGAITESSLAQLNNA-----INMKADYSSC 843 Query: 214 YSTS 225 YS S Sbjct: 844 YSLS 847 >01_05_0658 - 24043655-24043945,24044003-24044257,24044359-24044530, 24044617-24044844,24045688-24045821,24045908-24045991, 24046202-24046492,24046571-24046903,24047002-24047246, 24047476-24047742,24048305-24048465,24048556-24048872, 24048966-24049247,24049325-24049626,24049699-24049789, 24049881-24049934,24050028-24050104,24050192-24050367, 24051331-24051540,24051626-24052029 Length = 1457 Score = 27.9 bits (59), Expect = 8.9 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +2 Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITF 634 PY + P L ++++S IVY M G + V +F + Sbjct: 1271 PYAFGQVAIEFPYTLVQSVIYSIIVYSMIGFQWTVAKFFWY 1311 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,551,438 Number of Sequences: 37544 Number of extensions: 394183 Number of successful extensions: 983 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 954 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 983 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1945321620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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