BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0551 (738 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07 SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74 SB_6359| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 29 3.0 SB_27050| Best HMM Match : Pkinase_Tyr (HMM E-Value=1e-06) 29 3.9 SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9 SB_54462| Best HMM Match : TPR_1 (HMM E-Value=3.9e-32) 29 5.2 SB_44530| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2 SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 28 6.9 SB_31135| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_15464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1 SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38) 28 9.1 >SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 815 Score = 52.8 bits (121), Expect = 3e-07 Identities = 26/86 (30%), Positives = 45/86 (52%) Frame = +3 Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431 +R I R+R ++++ GLLIG + + ND ++FN+ ++F +T Sbjct: 541 KRAFQSILRDRVFTHLRVVSIAAVGLLIGLLYLGIGNDANKVFNNTGCLFFSLLFLMFTS 600 Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509 +M VL +P E + +E+ N WYSL Sbjct: 601 LMPTVLTFPMEKLVFIREHLNNWYSL 626 Score = 42.3 bits (95), Expect = 4e-04 Identities = 19/55 (34%), Positives = 32/55 (58%) Frame = +2 Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSE 670 L YY A T++ +P Q+ +++ TIVYFM P +R+ F A+ + LV++ Sbjct: 626 LKSYYLAKTMADVPFQILFPLIYCTIVYFMTEQPHEGLRYTQFVAITILTCLVAQ 680 >SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4247 Score = 31.5 bits (68), Expect = 0.74 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +3 Query: 435 MVPVLVYPQEVKLVKKEYFN-CWYSLLHTTPRSQSQSFQYN 554 +VPVLV Q + LV + YFN Y TP Q S +YN Sbjct: 4111 LVPVLVSTQSLILVAEPYFNEPGYERSRGTPSGQQNSQEYN 4151 >SB_6359| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 309 Score = 29.5 bits (63), Expect = 3.0 Identities = 10/33 (30%), Positives = 19/33 (57%) Frame = +2 Query: 587 YFMAGIPFNVMRFITFCAVGNMVSLVSEESAWL 685 +++ G+ F V+ + FC + N+ S E+ WL Sbjct: 160 FWVEGVQFVVLNSLYFCELSNLESFKQEQQEWL 192 >SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) Length = 1362 Score = 29.5 bits (63), Expect = 3.0 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -2 Query: 737 IADGPTAHPFVTLKTDPIAKPILRRLKTPCSPRHRTL 627 ++ P +H +TL+T+P KP+LR ++ + R+L Sbjct: 643 VSTQPLSHDDITLETNPGRKPVLRHTRSCDDVKERSL 679 >SB_27050| Best HMM Match : Pkinase_Tyr (HMM E-Value=1e-06) Length = 571 Score = 29.1 bits (62), Expect = 3.9 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 601 YSIQRNEVHNVLCRGEHGVFSLRRIGLAIGSVFN 702 Y++ N V N++ RGE+G F+ G+ S N Sbjct: 348 YTVNENYVKNIIKRGENGAFTFADAGILYPSPAN 381 >SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 958 Score = 29.1 bits (62), Expect = 3.9 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = +2 Query: 503 QLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSE 670 +L+ YY A S+LP+ + I F + Y+M G+ +V F+T +V + S+ ++ Sbjct: 225 RLSAYYFAKLFSELPLVVCQPIGFMLVAYWMCGLNESV-AFLTHLSVLLLTSITAQ 279 >SB_54462| Best HMM Match : TPR_1 (HMM E-Value=3.9e-32) Length = 425 Score = 28.7 bits (61), Expect = 5.2 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +3 Query: 333 IGACFYNMANDGTEMFNHLK-LCV 401 IGA FY++ +DG M N+ K LC+ Sbjct: 147 IGAVFYSLGDDGQAMMNYKKALCI 170 >SB_44530| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 141 Score = 28.7 bits (61), Expect = 5.2 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +1 Query: 166 SSAWMKIQKPSDYDISYSTSYF 231 SS+W KI++P D++ STSYF Sbjct: 52 SSSW-KIERPEPLDLNQSTSYF 72 >SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) Length = 434 Score = 28.3 bits (60), Expect = 6.9 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -2 Query: 734 ADGPTAHPFVTLKTDPIAKPILRRLKTP 651 A PT HP +T + P P + R TP Sbjct: 205 ASTPTTHPHITHASTPTTHPYIARASTP 232 Score = 27.9 bits (59), Expect = 9.1 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -2 Query: 734 ADGPTAHPFVTLKTDPIAKPILRRLKTPCSPRHRT 630 A PT HP +T + P P + TP + H T Sbjct: 123 ASTPTTHPHITHASTPTTHPHITHASTPTTHPHIT 157 >SB_31135| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 146 Score = 28.3 bits (60), Expect = 6.9 Identities = 9/42 (21%), Positives = 21/42 (50%) Frame = +3 Query: 387 LKLCVGIVIFFAYTQIMVPVLVYPQEVKLVKKEYFNCWYSLL 512 + C+G ++ T ++ P ++ L KE +CW+ ++ Sbjct: 75 ISACIGYDVYQVMTDVVKPKIIVVAYESLKIKENLSCWFEIV 116 >SB_15464| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1042 Score = 27.9 bits (59), Expect = 9.1 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +2 Query: 536 SKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSL 661 +KL F NILF ++F G+P +M + AVG++ S+ Sbjct: 863 NKLHYATFINILF---IFFALGMPIILMNMLVGLAVGDIDSI 901 >SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38) Length = 1172 Score = 27.9 bits (59), Expect = 9.1 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = -2 Query: 446 NWDHDLRVREEYHNSHTQLQVVKHLCSVVGHIIE 345 NW+ L+++ + HN VK LC ++E Sbjct: 39 NWEKTLKLKPQVHNVAVDTTSVKQLCEKYKEVLE 72 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,374,892 Number of Sequences: 59808 Number of extensions: 480620 Number of successful extensions: 1259 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1066 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1256 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1986074805 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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