BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0551 (738 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 35 0.052 AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical ... 34 0.12 AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 34 0.12 U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 33 0.28 Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.85 U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical pr... 31 1.1 Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 4.5 Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 4.5 Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 4.5 Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 4.5 AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 4.5 U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical p... 28 6.0 AC006804-2|AAL32253.2| 372|Caenorhabditis elegans Hypothetical ... 28 7.9 >AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical protein F02E11.1 protein. Length = 567 Score = 35.1 bits (77), Expect = 0.052 Identities = 16/57 (28%), Positives = 34/57 (59%) Frame = +2 Query: 515 YYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSEESAWL 685 Y+ A ++++LP +++ TI+Y+MAG+ +V F+ F V ++ V+ A++ Sbjct: 380 YFLAKSLAELPQYTILPMIYGTIIYWMAGLVASVTSFLVFVFVCITLTWVAVSIAYV 436 >AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical protein Y42G9A.6b protein. Length = 547 Score = 33.9 bits (74), Expect = 0.12 Identities = 13/57 (22%), Positives = 36/57 (63%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 L +++ Y+ + +++LP + ++F++I+Y+M+G+ + F+ + VG +V ++ Sbjct: 361 LYRVSAYFISKNLAELPSYIVSAVIFTSILYWMSGLVPIIDSFLIYMLVGILVQNIA 417 >AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical protein Y42G9A.6a protein. Length = 684 Score = 33.9 bits (74), Expect = 0.12 Identities = 13/57 (22%), Positives = 36/57 (63%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 L +++ Y+ + +++LP + ++F++I+Y+M+G+ + F+ + VG +V ++ Sbjct: 498 LYRVSAYFISKNLAELPSYIVSAVIFTSILYWMSGLVPIIDSFLIYMLVGILVQNIA 554 >U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical protein C05D10.3 protein. Length = 598 Score = 32.7 bits (71), Expect = 0.28 Identities = 16/51 (31%), Positives = 30/51 (58%) Frame = +2 Query: 515 YYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 Y+ A +++LP + IL++TIVY+M+G+ N F +C + L++ Sbjct: 412 YFLAKNIAELPQYIILPILYNTIVYWMSGLYPN---FWNYCFASLVTILIT 459 >Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical protein C29E6.4 protein. Length = 906 Score = 31.1 bits (67), Expect = 0.85 Identities = 19/60 (31%), Positives = 32/60 (53%) Frame = +1 Query: 46 DNAPETEIMLTNEKCVYKVQSYSNTASMCSLSSQLSGINNSSAWMKIQKPSDYDISYSTS 225 +N + + N K ++ S+S T++ C LS+ L +S KI KPS+ +YS+S Sbjct: 391 ENVQDCWSLCVNSKVHCELISFSTTSNQCLLST-LKSSETASDSKKITKPSETFDTYSSS 449 >U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical protein F41D9.1 protein. Length = 826 Score = 30.7 bits (66), Expect = 1.1 Identities = 13/56 (23%), Positives = 28/56 (50%) Frame = +3 Query: 243 YTSQRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIV 410 YT + +L Q ++++ + +Q+ L+ L CF+ ++G E + CV + Sbjct: 175 YTYESVLQQCAQDKPSIGVQIERDLLRTLPNNICFWKKNSEGIEALRRILKCVAFI 230 >Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein F15G9.4b protein. Length = 5198 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 441 PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557 P + + ++ KL++ F YS L T S S S +Y C Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637 >Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein F15G9.4a protein. Length = 5175 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 441 PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557 P + + ++ KL++ F YS L T S S S +Y C Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637 >Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein F15G9.4b protein. Length = 5198 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 441 PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557 P + + ++ KL++ F YS L T S S S +Y C Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637 >Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein F15G9.4a protein. Length = 5175 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 441 PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557 P + + ++ KL++ F YS L T S S S +Y C Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637 >AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin precursor protein. Length = 5198 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 441 PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557 P + + ++ KL++ F YS L T S S S +Y C Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637 >U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical protein T26A5.1 protein. Length = 613 Score = 28.3 bits (60), Expect = 6.0 Identities = 16/61 (26%), Positives = 35/61 (57%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSEES 676 L L YY A +S +P+ ++ IVY++ G+ +VM+ I V +++++++ ++ Sbjct: 428 LYNLWTYYFARCISLIPLFSTDGLILLFIVYWLIGLNTSVMQVI----VASIITVLASQA 483 Query: 677 A 679 A Sbjct: 484 A 484 >AC006804-2|AAL32253.2| 372|Caenorhabditis elegans Hypothetical protein Y53G8B.3 protein. Length = 372 Score = 27.9 bits (59), Expect = 7.9 Identities = 13/41 (31%), Positives = 26/41 (63%) Frame = +3 Query: 315 LMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQIM 437 L+ GLL+G Y++ ++GT + +KL + V+ A+ Q++ Sbjct: 274 LLPGLLLGMILYDVYHNGTRL---VKLTLAPVVLVAFAQLL 311 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,375,857 Number of Sequences: 27780 Number of extensions: 372815 Number of successful extensions: 970 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 945 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 970 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1735436670 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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