Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0551
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016661-4|AAB66050.2|  567|Caenorhabditis elegans Hypothetical ...    35   0.052
AC006762-6|ABJ99063.1|  547|Caenorhabditis elegans Hypothetical ...    34   0.12 
AC006762-5|AAF60553.2|  684|Caenorhabditis elegans Hypothetical ...    34   0.12 
U13645-7|AAA20989.2|  598|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z72504-6|CAA96604.2|  906|Caenorhabditis elegans Hypothetical pr...    31   0.85 
U67954-1|AAB52605.2|  826|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    29   4.5  
U00043-12|AAC77504.2|  613|Caenorhabditis elegans Hypothetical p...    28   6.0  
AC006804-2|AAL32253.2|  372|Caenorhabditis elegans Hypothetical ...    28   7.9  

>AF016661-4|AAB66050.2|  567|Caenorhabditis elegans Hypothetical
           protein F02E11.1 protein.
          Length = 567

 Score = 35.1 bits (77), Expect = 0.052
 Identities = 16/57 (28%), Positives = 34/57 (59%)
 Frame = +2

Query: 515 YYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSEESAWL 685
           Y+ A ++++LP      +++ TI+Y+MAG+  +V  F+ F  V   ++ V+   A++
Sbjct: 380 YFLAKSLAELPQYTILPMIYGTIIYWMAGLVASVTSFLVFVFVCITLTWVAVSIAYV 436


>AC006762-6|ABJ99063.1|  547|Caenorhabditis elegans Hypothetical
           protein Y42G9A.6b protein.
          Length = 547

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 13/57 (22%), Positives = 36/57 (63%)
 Frame = +2

Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
           L +++ Y+ +  +++LP  +   ++F++I+Y+M+G+   +  F+ +  VG +V  ++
Sbjct: 361 LYRVSAYFISKNLAELPSYIVSAVIFTSILYWMSGLVPIIDSFLIYMLVGILVQNIA 417


>AC006762-5|AAF60553.2|  684|Caenorhabditis elegans Hypothetical
           protein Y42G9A.6a protein.
          Length = 684

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 13/57 (22%), Positives = 36/57 (63%)
 Frame = +2

Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
           L +++ Y+ +  +++LP  +   ++F++I+Y+M+G+   +  F+ +  VG +V  ++
Sbjct: 498 LYRVSAYFISKNLAELPSYIVSAVIFTSILYWMSGLVPIIDSFLIYMLVGILVQNIA 554


>U13645-7|AAA20989.2|  598|Caenorhabditis elegans Hypothetical
           protein C05D10.3 protein.
          Length = 598

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +2

Query: 515 YYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
           Y+ A  +++LP  +   IL++TIVY+M+G+  N   F  +C    +  L++
Sbjct: 412 YFLAKNIAELPQYIILPILYNTIVYWMSGLYPN---FWNYCFASLVTILIT 459


>Z72504-6|CAA96604.2|  906|Caenorhabditis elegans Hypothetical
           protein C29E6.4 protein.
          Length = 906

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +1

Query: 46  DNAPETEIMLTNEKCVYKVQSYSNTASMCSLSSQLSGINNSSAWMKIQKPSDYDISYSTS 225
           +N  +   +  N K   ++ S+S T++ C LS+ L     +S   KI KPS+   +YS+S
Sbjct: 391 ENVQDCWSLCVNSKVHCELISFSTTSNQCLLST-LKSSETASDSKKITKPSETFDTYSSS 449


>U67954-1|AAB52605.2|  826|Caenorhabditis elegans Hypothetical
           protein F41D9.1 protein.
          Length = 826

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/56 (23%), Positives = 28/56 (50%)
 Frame = +3

Query: 243 YTSQRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIV 410
           YT + +L Q ++++  + +Q+   L+  L    CF+   ++G E    +  CV  +
Sbjct: 175 YTYESVLQQCAQDKPSIGVQIERDLLRTLPNNICFWKKNSEGIEALRRILKCVAFI 230


>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 441  PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557
            P + + ++ KL++   F   YS L  T  S S S +Y C
Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 441  PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557
            P + + ++ KL++   F   YS L  T  S S S +Y C
Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
            F15G9.4b protein.
          Length = 5198

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 441  PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557
            P + + ++ KL++   F   YS L  T  S S S +Y C
Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
            F15G9.4a protein.
          Length = 5175

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 441  PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557
            P + + ++ KL++   F   YS L  T  S S S +Y C
Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
            precursor protein.
          Length = 5198

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 441  PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYNC 557
            P + + ++ KL++   F   YS L  T  S S S +Y C
Sbjct: 4599 PTITWAKDGKLIEDSKFEIAYSHLKVTLNSTSDSGEYTC 4637


>U00043-12|AAC77504.2|  613|Caenorhabditis elegans Hypothetical
           protein T26A5.1 protein.
          Length = 613

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/61 (26%), Positives = 35/61 (57%)
 Frame = +2

Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVSEES 676
           L  L  YY A  +S +P+     ++   IVY++ G+  +VM+ I    V +++++++ ++
Sbjct: 428 LYNLWTYYFARCISLIPLFSTDGLILLFIVYWLIGLNTSVMQVI----VASIITVLASQA 483

Query: 677 A 679
           A
Sbjct: 484 A 484


>AC006804-2|AAL32253.2|  372|Caenorhabditis elegans Hypothetical
           protein Y53G8B.3 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = +3

Query: 315 LMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQIM 437
           L+ GLL+G   Y++ ++GT +   +KL +  V+  A+ Q++
Sbjct: 274 LLPGLLLGMILYDVYHNGTRL---VKLTLAPVVLVAFAQLL 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,375,857
Number of Sequences: 27780
Number of extensions: 372815
Number of successful extensions: 970
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)