Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0551
(738 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52310.1 68416.m05749 ABC transporter family protein contains... 40 0.002
At4g27420.1 68417.m03941 ABC transporter family protein D.melano... 37 0.016
At1g51460.1 68414.m05792 ABC transporter family protein similar ... 34 0.11
At5g06530.2 68418.m00737 ABC transporter family protein 33 0.20
At5g06530.1 68418.m00736 ABC transporter family protein 33 0.20
At2g01320.4 68415.m00049 ABC transporter family protein 33 0.26
At2g01320.3 68415.m00047 ABC transporter family protein 33 0.26
At2g01320.2 68415.m00046 ABC transporter family protein 33 0.26
At2g01320.1 68415.m00048 ABC transporter family protein 33 0.26
At2g07740.1 68415.m01002 zinc knuckle (CCHC-type) family protein... 30 1.4
At2g13610.1 68415.m01500 ABC transporter family protein 30 1.8
At1g31770.1 68414.m03899 ABC transporter family protein contains... 29 2.4
At3g54770.1 68416.m06060 RNA recognition motif (RRM)-containing ... 29 3.2
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 29 3.2
At1g53270.1 68414.m06037 ABC transporter family protein contains... 29 4.3
At5g35220.1 68418.m04176 peptidase M50 family protein / sterol-r... 28 7.4
At3g45800.1 68416.m04957 hypothetical protein 28 7.4
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro... 28 7.4
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 28 7.4
At2g01080.1 68415.m00014 expressed protein 28 7.4
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 28 7.4
At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P4... 27 9.8
At3g02440.1 68416.m00231 expressed protein 27 9.8
>At3g52310.1 68416.m05749 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter
Length = 737
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRF 625
+ +L+ Y+ A T S LP+ L +LF +VYFMAG+ F
Sbjct: 571 MYRLSAYFVARTTSDLPLDLILPVLFLVVVYFMAGLRLRAESF 613
>At4g27420.1 68417.m03941 ABC transporter family protein
D.melanogaster P element CaSpeR-1 gene (white
protein),PID:g870996
Length = 639
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
+ +L+PY+ + V LP++L F I Y+MAG+ N+ F V + LVS
Sbjct: 456 MYRLSPYFLSRVVGDLPMELILPTCFLVITYWMAGLNHNLANFFVTLLVLLVHVLVS 512
>At1g51460.1 68414.m05792 ABC transporter family protein similar to
SP|Q9UNQ0 ATP-binding cassette, sub-family G, member 2
(Placenta-specific ATP- binding cassette transporter)
(Breast cancer resistance protein) {Homo sapiens};
contains Pfam profile PF00005: ABC transporter
Length = 678
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/87 (19%), Positives = 43/87 (49%)
Frame = +3
Query: 249 SQRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYT 428
+QR + +SR+ W+++ +++ + +G+ F+N+ + T + + C G + F
Sbjct: 361 TQRSFINMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNVMS-TAACGGFMAGFMTF 419
Query: 429 QIMVPVLVYPQEVKLVKKEYFNCWYSL 509
+ + +E+K+ +E N Y +
Sbjct: 420 MSIGGFQSFIEEMKVFSRERLNGHYGV 446
>At5g06530.2 68418.m00737 ABC transporter family protein
Length = 691
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGI 604
+ +L+ Y+ A T S LP+ LF +VYFM G+
Sbjct: 587 MYRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGL 622
>At5g06530.1 68418.m00736 ABC transporter family protein
Length = 751
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGI 604
+ +L+ Y+ A T S LP+ LF +VYFM G+
Sbjct: 587 MYRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGL 622
>At2g01320.4 68415.m00049 ABC transporter family protein
Length = 725
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
L PY + T++++P+ ++F ++Y MA + + RF FC + + S +
Sbjct: 484 LGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAA 537
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431
+R +Q SR+ ++ + ++ G+ F+ M T + + + L I A
Sbjct: 399 KRAWMQASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAA 458
Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509
+ V V+P+E +V +E YSL
Sbjct: 459 LTKTVGVFPKERAIVDRERSKGSYSL 484
>At2g01320.3 68415.m00047 ABC transporter family protein
Length = 728
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
L PY + T++++P+ ++F ++Y MA + + RF FC + + S +
Sbjct: 484 LGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAA 537
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431
+R +Q SR+ ++ + ++ G+ F+ M T + + + L I A
Sbjct: 399 KRAWMQASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAA 458
Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509
+ V V+P+E +V +E YSL
Sbjct: 459 LTKTVGVFPKERAIVDRERSKGSYSL 484
>At2g01320.2 68415.m00046 ABC transporter family protein
Length = 727
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
L PY + T++++P+ ++F ++Y MA + + RF FC + + S +
Sbjct: 484 LGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAA 537
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431
+R +Q SR+ ++ + ++ G+ F+ M T + + + L I A
Sbjct: 399 KRAWMQASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAA 458
Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509
+ V V+P+E +V +E YSL
Sbjct: 459 LTKTVGVFPKERAIVDRERSKGSYSL 484
>At2g01320.1 68415.m00048 ABC transporter family protein
Length = 725
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
L PY + T++++P+ ++F ++Y MA + + RF FC + + S +
Sbjct: 484 LGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAA 537
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431
+R +Q SR+ ++ + ++ G+ F+ M T + + + L I A
Sbjct: 399 KRAWMQASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAA 458
Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509
+ V V+P+E +V +E YSL
Sbjct: 459 LTKTVGVFPKERAIVDRERSKGSYSL 484
>At2g07740.1 68415.m01002 zinc knuckle (CCHC-type) family protein
similar to zinc finger protein GB:AAA75253; some members
of this protein family have a weak CCHC zinc fingers
that is mostly from retroviral gag proteins
(nucleocapsid)
Length = 409
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 419 EEYHNSHTQLQVVKHLCSVVGHIIEACSYQKP 324
E Y+ S+ L V+ LC V GH+ AC + P
Sbjct: 182 ECYYASYEGLNVICSLCGVFGHLAGACPKRSP 213
>At2g13610.1 68415.m01500 ABC transporter family protein
Length = 649
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 503 QLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITF 634
+++ Y A + LP L ILFST VY++ G+ + M F+ F
Sbjct: 461 RVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHF 504
>At1g31770.1 68414.m03899 ABC transporter family protein contains
Pfam profile: PF00005: ABC transporter
Length = 648
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFI 628
+ +L+ Y+ A V LP++L F I+Y+M G+ + FI
Sbjct: 470 MYRLSSYFMARNVGDLPLELALPTAFVFIIYWMGGLKPDPTTFI 513
>At3g54770.1 68416.m06060 RNA recognition motif (RRM)-containing
protein low similarity to RRM-containing protein SEB-4
[Xenopus laevis] GI:8895698; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 261
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 408 VIFFAYTQIMV-PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYN 554
V F+ Y V P + + Q+V V Y N +Y+ + P+SQ Q Y+
Sbjct: 147 VPFYGYPSAYVAPNMTFNQKVGYVGGTYMNGYYAQMQPQPQSQPQPQYYH 196
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAV 643
PY + +LP L + +S IVY M G + +F F V
Sbjct: 1289 PYAISQVTCELPYVLIQTVYYSLIVYAMVGFEWKAEKFFWFVFV 1332
>At1g53270.1 68414.m06037 ABC transporter family protein contains
similarity to ABC transporter GI:10280532 from [Homo
sapiens]
Length = 590
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 515 YYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667
Y A T+ +P L ++LF+T VY++ G+ + F+ F V +V L+S
Sbjct: 427 YVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMS 477
>At5g35220.1 68418.m04176 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 548
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 76 TNEKCVYKVQSYSNTASMCSLSSQLSGINNSSAWMKIQKPSDYDISYSTSYFDQFSIL 249
T++ V K ++ S SS + +N K PS D +YS+ D F ++
Sbjct: 74 THKSSVVKTATFEEEDEETSKSSSTTSSSNEFGSDKTSMPSTIDPTYSSFQIDSFKLM 131
>At3g45800.1 68416.m04957 hypothetical protein
Length = 563
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 49 NAPETEIMLTN--EKCVYKVQSYSNTASMCSLSSQLSGINNSSAWMKIQKPSDYDISYST 222
N ET + N E C+YK S T + + +S + W ++QK S +
Sbjct: 117 NVSETIDKVKNLIETCIYKYMSLEETVTYLEDNHNISHHLTITIWEQLQKESP---EFFK 173
Query: 223 SYFDQFSILLK 255
Y+ FS++++
Sbjct: 174 KYYFHFSLMVE 184
>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 2
(SAC2) GI:31415720
Length = 808
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -3
Query: 673 FFGD*RHHVPHGTERYEPHYVEWNTSHEVNYCREQYVTKQLYWKL*DC 530
FF +H+ H +R + VE +T +E + +Y+T+++ + DC
Sbjct: 167 FFFSYSYHIMHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDC 214
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana plumbaginifolia]
Length = 1426
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITF 634
PY AA + ++P L IL+ I YF G +F+ +
Sbjct: 1248 PYAAAQGLVEIPYILTQTILYGVITYFTIGFERTFSKFVLY 1288
>At2g01080.1 68415.m00014 expressed protein
Length = 231
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 139 SSQLSGINNSSAWMKIQKPSDYDISYSTSYFDQFSILLKGCCC 267
SS +G+N + Q+P Y SY S LKGCCC
Sbjct: 6 SSSRAGLNGDPIAAQNQQP------YYRSYSSSSSASLKGCCC 42
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITF 634
PY + +LP L +S I+Y M G + +F+ F
Sbjct: 1262 PYAISQVTCELPYVLIQTTYYSLIIYSMVGFEWKASKFLWF 1302
>At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P450
77A3p, Glycine max, PIR:T05948
Length = 509
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 544 SSTTVL*HTVLYNSLLHGWYSIQRNEVHNVLC 639
SS+ + H+ +Y + W S++RN V N+LC
Sbjct: 119 SSSDITVHSAMYGPV---WRSLRRNMVQNMLC 147
>At3g02440.1 68416.m00231 expressed protein
Length = 373
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 94 YKVQSYSNTASMCSLSSQLSGINNSSAWMKIQ--KPSDYDISYSTSYFD 234
YK S S+++S S S+ + ++SS K + +PS YD Y +Y D
Sbjct: 41 YKHLSNSSSSSAISSPSRYNHSSSSSDSYKTEDSEPSSYDNDYDDTYHD 89
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,125,301
Number of Sequences: 28952
Number of extensions: 334892
Number of successful extensions: 909
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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