BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0551 (738 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g52310.1 68416.m05749 ABC transporter family protein contains... 40 0.002 At4g27420.1 68417.m03941 ABC transporter family protein D.melano... 37 0.016 At1g51460.1 68414.m05792 ABC transporter family protein similar ... 34 0.11 At5g06530.2 68418.m00737 ABC transporter family protein 33 0.20 At5g06530.1 68418.m00736 ABC transporter family protein 33 0.20 At2g01320.4 68415.m00049 ABC transporter family protein 33 0.26 At2g01320.3 68415.m00047 ABC transporter family protein 33 0.26 At2g01320.2 68415.m00046 ABC transporter family protein 33 0.26 At2g01320.1 68415.m00048 ABC transporter family protein 33 0.26 At2g07740.1 68415.m01002 zinc knuckle (CCHC-type) family protein... 30 1.4 At2g13610.1 68415.m01500 ABC transporter family protein 30 1.8 At1g31770.1 68414.m03899 ABC transporter family protein contains... 29 2.4 At3g54770.1 68416.m06060 RNA recognition motif (RRM)-containing ... 29 3.2 At1g59870.1 68414.m06745 ABC transporter family protein similar ... 29 3.2 At1g53270.1 68414.m06037 ABC transporter family protein contains... 29 4.3 At5g35220.1 68418.m04176 peptidase M50 family protein / sterol-r... 28 7.4 At3g45800.1 68416.m04957 hypothetical protein 28 7.4 At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro... 28 7.4 At2g29940.1 68415.m03642 ABC transporter family protein similar ... 28 7.4 At2g01080.1 68415.m00014 expressed protein 28 7.4 At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 28 7.4 At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P4... 27 9.8 At3g02440.1 68416.m00231 expressed protein 27 9.8 >At3g52310.1 68416.m05749 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter Length = 737 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRF 625 + +L+ Y+ A T S LP+ L +LF +VYFMAG+ F Sbjct: 571 MYRLSAYFVARTTSDLPLDLILPVLFLVVVYFMAGLRLRAESF 613 >At4g27420.1 68417.m03941 ABC transporter family protein D.melanogaster P element CaSpeR-1 gene (white protein),PID:g870996 Length = 639 Score = 36.7 bits (81), Expect = 0.016 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 + +L+PY+ + V LP++L F I Y+MAG+ N+ F V + LVS Sbjct: 456 MYRLSPYFLSRVVGDLPMELILPTCFLVITYWMAGLNHNLANFFVTLLVLLVHVLVS 512 >At1g51460.1 68414.m05792 ABC transporter family protein similar to SP|Q9UNQ0 ATP-binding cassette, sub-family G, member 2 (Placenta-specific ATP- binding cassette transporter) (Breast cancer resistance protein) {Homo sapiens}; contains Pfam profile PF00005: ABC transporter Length = 678 Score = 33.9 bits (74), Expect = 0.11 Identities = 17/87 (19%), Positives = 43/87 (49%) Frame = +3 Query: 249 SQRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYT 428 +QR + +SR+ W+++ +++ + +G+ F+N+ + T + + C G + F Sbjct: 361 TQRSFINMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNVMS-TAACGGFMAGFMTF 419 Query: 429 QIMVPVLVYPQEVKLVKKEYFNCWYSL 509 + + +E+K+ +E N Y + Sbjct: 420 MSIGGFQSFIEEMKVFSRERLNGHYGV 446 >At5g06530.2 68418.m00737 ABC transporter family protein Length = 691 Score = 33.1 bits (72), Expect = 0.20 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGI 604 + +L+ Y+ A T S LP+ LF +VYFM G+ Sbjct: 587 MYRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGL 622 >At5g06530.1 68418.m00736 ABC transporter family protein Length = 751 Score = 33.1 bits (72), Expect = 0.20 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGI 604 + +L+ Y+ A T S LP+ LF +VYFM G+ Sbjct: 587 MYRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGL 622 >At2g01320.4 68415.m00049 ABC transporter family protein Length = 725 Score = 32.7 bits (71), Expect = 0.26 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = +2 Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 L PY + T++++P+ ++F ++Y MA + + RF FC + + S + Sbjct: 484 LGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAA 537 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/86 (23%), Positives = 38/86 (44%) Frame = +3 Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431 +R +Q SR+ ++ + ++ G+ F+ M T + + + L I A Sbjct: 399 KRAWMQASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAA 458 Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509 + V V+P+E +V +E YSL Sbjct: 459 LTKTVGVFPKERAIVDRERSKGSYSL 484 >At2g01320.3 68415.m00047 ABC transporter family protein Length = 728 Score = 32.7 bits (71), Expect = 0.26 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = +2 Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 L PY + T++++P+ ++F ++Y MA + + RF FC + + S + Sbjct: 484 LGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAA 537 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/86 (23%), Positives = 38/86 (44%) Frame = +3 Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431 +R +Q SR+ ++ + ++ G+ F+ M T + + + L I A Sbjct: 399 KRAWMQASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAA 458 Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509 + V V+P+E +V +E YSL Sbjct: 459 LTKTVGVFPKERAIVDRERSKGSYSL 484 >At2g01320.2 68415.m00046 ABC transporter family protein Length = 727 Score = 32.7 bits (71), Expect = 0.26 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = +2 Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 L PY + T++++P+ ++F ++Y MA + + RF FC + + S + Sbjct: 484 LGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAA 537 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/86 (23%), Positives = 38/86 (44%) Frame = +3 Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431 +R +Q SR+ ++ + ++ G+ F+ M T + + + L I A Sbjct: 399 KRAWMQASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAA 458 Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509 + V V+P+E +V +E YSL Sbjct: 459 LTKTVGVFPKERAIVDRERSKGSYSL 484 >At2g01320.1 68415.m00048 ABC transporter family protein Length = 725 Score = 32.7 bits (71), Expect = 0.26 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = +2 Query: 506 LTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 L PY + T++++P+ ++F ++Y MA + + RF FC + + S + Sbjct: 484 LGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAA 537 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/86 (23%), Positives = 38/86 (44%) Frame = +3 Query: 252 QRMLLQISRNRQGLWIQLLHHLMCGLLIGACFYNMANDGTEMFNHLKLCVGIVIFFAYTQ 431 +R +Q SR+ ++ + ++ G+ F+ M T + + + L I A Sbjct: 399 KRAWMQASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAA 458 Query: 432 IMVPVLVYPQEVKLVKKEYFNCWYSL 509 + V V+P+E +V +E YSL Sbjct: 459 LTKTVGVFPKERAIVDRERSKGSYSL 484 >At2g07740.1 68415.m01002 zinc knuckle (CCHC-type) family protein similar to zinc finger protein GB:AAA75253; some members of this protein family have a weak CCHC zinc fingers that is mostly from retroviral gag proteins (nucleocapsid) Length = 409 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 Query: 419 EEYHNSHTQLQVVKHLCSVVGHIIEACSYQKP 324 E Y+ S+ L V+ LC V GH+ AC + P Sbjct: 182 ECYYASYEGLNVICSLCGVFGHLAGACPKRSP 213 >At2g13610.1 68415.m01500 ABC transporter family protein Length = 649 Score = 29.9 bits (64), Expect = 1.8 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +2 Query: 503 QLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITF 634 +++ Y A + LP L ILFST VY++ G+ + M F+ F Sbjct: 461 RVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHF 504 >At1g31770.1 68414.m03899 ABC transporter family protein contains Pfam profile: PF00005: ABC transporter Length = 648 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +2 Query: 497 LVQLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFI 628 + +L+ Y+ A V LP++L F I+Y+M G+ + FI Sbjct: 470 MYRLSSYFMARNVGDLPLELALPTAFVFIIYWMGGLKPDPTTFI 513 >At3g54770.1 68416.m06060 RNA recognition motif (RRM)-containing protein low similarity to RRM-containing protein SEB-4 [Xenopus laevis] GI:8895698; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) Length = 261 Score = 29.1 bits (62), Expect = 3.2 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +3 Query: 408 VIFFAYTQIMV-PVLVYPQEVKLVKKEYFNCWYSLLHTTPRSQSQSFQYN 554 V F+ Y V P + + Q+V V Y N +Y+ + P+SQ Q Y+ Sbjct: 147 VPFYGYPSAYVAPNMTFNQKVGYVGGTYMNGYYAQMQPQPQSQPQPQYYH 196 >At1g59870.1 68414.m06745 ABC transporter family protein similar to PDR5-like ABC transporter GI:1514643 from [Spirodela polyrhiza] Length = 1469 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +2 Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAV 643 PY + +LP L + +S IVY M G + +F F V Sbjct: 1289 PYAISQVTCELPYVLIQTVYYSLIVYAMVGFEWKAEKFFWFVFV 1332 >At1g53270.1 68414.m06037 ABC transporter family protein contains similarity to ABC transporter GI:10280532 from [Homo sapiens] Length = 590 Score = 28.7 bits (61), Expect = 4.3 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = +2 Query: 515 YYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCAVGNMVSLVS 667 Y A T+ +P L ++LF+T VY++ G+ + F+ F V +V L+S Sbjct: 427 YVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMS 477 >At5g35220.1 68418.m04176 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein contains PFam PF02163: sterol-regulatory element binding protein (SREBP) site 2 protease Length = 548 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = +1 Query: 76 TNEKCVYKVQSYSNTASMCSLSSQLSGINNSSAWMKIQKPSDYDISYSTSYFDQFSIL 249 T++ V K ++ S SS + +N K PS D +YS+ D F ++ Sbjct: 74 THKSSVVKTATFEEEDEETSKSSSTTSSSNEFGSDKTSMPSTIDPTYSSFQIDSFKLM 131 >At3g45800.1 68416.m04957 hypothetical protein Length = 563 Score = 27.9 bits (59), Expect = 7.4 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Frame = +1 Query: 49 NAPETEIMLTN--EKCVYKVQSYSNTASMCSLSSQLSGINNSSAWMKIQKPSDYDISYST 222 N ET + N E C+YK S T + + +S + W ++QK S + Sbjct: 117 NVSETIDKVKNLIETCIYKYMSLEETVTYLEDNHNISHHLTITIWEQLQKESP---EFFK 173 Query: 223 SYFDQFSILLK 255 Y+ FS++++ Sbjct: 174 KYYFHFSLMVE 184 >At3g14205.1 68416.m01795 phosphoinositide phosphatase family protein contains similarity to phosphoinositide phosphatase SAC1 [Rattus norvegicus] gi|11095248|gb|AAG29810; contains Pfam domain, PF02383: SacI homology domain; identical to SAC domain protein 2 (SAC2) GI:31415720 Length = 808 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/48 (27%), Positives = 26/48 (54%) Frame = -3 Query: 673 FFGD*RHHVPHGTERYEPHYVEWNTSHEVNYCREQYVTKQLYWKL*DC 530 FF +H+ H +R + VE +T +E + +Y+T+++ + DC Sbjct: 167 FFFSYSYHIMHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDC 214 >At2g29940.1 68415.m03642 ABC transporter family protein similar to ABC1 protein GI:14331118 from [Nicotiana plumbaginifolia] Length = 1426 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +2 Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITF 634 PY AA + ++P L IL+ I YF G +F+ + Sbjct: 1248 PYAAAQGLVEIPYILTQTILYGVITYFTIGFERTFSKFVLY 1288 >At2g01080.1 68415.m00014 expressed protein Length = 231 Score = 27.9 bits (59), Expect = 7.4 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +1 Query: 139 SSQLSGINNSSAWMKIQKPSDYDISYSTSYFDQFSILLKGCCC 267 SS +G+N + Q+P Y SY S LKGCCC Sbjct: 6 SSSRAGLNGDPIAAQNQQP------YYRSYSSSSSASLKGCCC 42 >At1g15210.1 68414.m01818 ABC transporter family protein Similar to gb|Z70524 GI:1514643 PDR5-like ABC transporter from Spirodela polyrrhiza and is a member of the PF|00005 ABC transporter family. ESTs gb|N97039 and gb|T43169 come from this gene Length = 1442 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/41 (29%), Positives = 19/41 (46%) Frame = +2 Query: 512 PYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITF 634 PY + +LP L +S I+Y M G + +F+ F Sbjct: 1262 PYAISQVTCELPYVLIQTTYYSLIIYSMVGFEWKASKFLWF 1302 >At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P450 77A3p, Glycine max, PIR:T05948 Length = 509 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 544 SSTTVL*HTVLYNSLLHGWYSIQRNEVHNVLC 639 SS+ + H+ +Y + W S++RN V N+LC Sbjct: 119 SSSDITVHSAMYGPV---WRSLRRNMVQNMLC 147 >At3g02440.1 68416.m00231 expressed protein Length = 373 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +1 Query: 94 YKVQSYSNTASMCSLSSQLSGINNSSAWMKIQ--KPSDYDISYSTSYFD 234 YK S S+++S S S+ + ++SS K + +PS YD Y +Y D Sbjct: 41 YKHLSNSSSSSAISSPSRYNHSSSSSDSYKTEDSEPSSYDNDYDDTYHD 89 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,125,301 Number of Sequences: 28952 Number of extensions: 334892 Number of successful extensions: 909 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 881 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 909 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1624036432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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