BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0550 (738 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 26 6.4 SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual 25 8.5 SPBC19F8.06c |meu22||amino acid permease, unknown 11|Schizosacch... 25 8.5 >SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces pombe|chr 2|||Manual Length = 466 Score = 25.8 bits (54), Expect = 6.4 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -2 Query: 215 DGDKCVQQIKDHKNR 171 D DKC++++K HK R Sbjct: 132 DSDKCLRRLKSHKER 146 >SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 394 Score = 25.4 bits (53), Expect = 8.5 Identities = 9/39 (23%), Positives = 20/39 (51%) Frame = +3 Query: 528 SNRFSSFGAYSIQTNKQNFPLYKISIDCINVPILNIDGS 644 S R + +G Y++ F + +DC ++P+ + D + Sbjct: 104 SRRLNLYGGYNVPMETNPFNNWAKIVDCGDIPLTSYDNA 142 >SPBC19F8.06c |meu22||amino acid permease, unknown 11|Schizosaccharomyces pombe|chr 2|||Manual Length = 574 Score = 25.4 bits (53), Expect = 8.5 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +1 Query: 175 FLWSLICCTHLSPSRIAE*RNNKIEKKMIGKIF 273 F+W IC H+ R + +N K+E IF Sbjct: 430 FIWGSICLAHIQFRRAWKIQNRKLEDLPYRSIF 462 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,854,181 Number of Sequences: 5004 Number of extensions: 58184 Number of successful extensions: 125 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 125 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 349251756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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