Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0550
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016415-6|AAB65267.1|  283|Caenorhabditis elegans Lysozyme prot...    31   1.1  
U61946-8|AAC24392.1|  185|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U28739-2|AAB93455.1|  286|Caenorhabditis elegans Lysozyme protei...    28   6.0  

>AF016415-6|AAB65267.1|  283|Caenorhabditis elegans Lysozyme protein
           7 protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 66  QQSPNYPPNIMSYAYVIDLY 7
           + +PN P N+ SYAY +D+Y
Sbjct: 41  EPAPNVPSNLASYAYALDIY 60


>U61946-8|AAC24392.1|  185|Caenorhabditis elegans Hypothetical
           protein F47C12.7 protein.
          Length = 185

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -1

Query: 276 GKYFTYHFFFNFIISLFCYSGRRQMCTTNQRP*KSVLPFSSYKCSNKPDF 127
           G + T+H+ FN  +S  C +  +  C T  +P ++++   S+    + DF
Sbjct: 60  GDFPTFHYEFNCFLSHDCSTDNKWYCQTRAKPFQTLINGFSHDVLPQIDF 109


>U28739-2|AAB93455.1|  286|Caenorhabditis elegans Lysozyme protein
          8 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 66 QQSPNYPPNIMSYAYVIDL 10
          + +P  PPN+ SYA+ +DL
Sbjct: 43 EAAPRVPPNLASYAFAVDL 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,255,936
Number of Sequences: 27780
Number of extensions: 308812
Number of successful extensions: 577
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)