Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0549
         (643 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498BC6 Cluster: hypothetical protein 20.t00052; ...    34   3.4  
UniRef50_Q9LNP2 Cluster: F1L3.33; n=1; Arabidopsis thaliana|Rep:...    33   4.4  
UniRef50_Q7RSB9 Cluster: Putative uncharacterized protein PY0044...    33   4.4  
UniRef50_Q241M9 Cluster: Response regulator receiver domain cont...    33   4.4  
UniRef50_A7BRA1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_Q8I3K3 Cluster: Putative uncharacterized protein PFE130...    33   5.9  
UniRef50_Q6LFN9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_UPI0000498BC6 Cluster: hypothetical protein 20.t00052;
           n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 20.t00052 - Entamoeba histolytica HM-1:IMSS
          Length = 328

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
 Frame = -3

Query: 356 INNQLIQNIKKKHPTKSSRNFTGLLMKNYLTLINLS-QGHPI-YAFM*HTILIININYRF 183
           ++++++Q +KK++ T  +++   L+ K  +T  N+S   + I YA   H ++++N N   
Sbjct: 229 LDSRVLQTLKKQNTTPPNKSLNKLIKKKIVTSTNISTSNYSIEYAMSKHAVILLNENPHD 288

Query: 182 ESHSSNLHLE 153
           +  S+N   E
Sbjct: 289 KVSSTNQKAE 298


>UniRef50_Q9LNP2 Cluster: F1L3.33; n=1; Arabidopsis thaliana|Rep:
           F1L3.33 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 731

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 422 KRKAQKCSEDFVQQSA**TIYPINNQLIQNIKKKHPTKSSRNF 294
           K+K  K S   + QS   TIYP+   L+ ++ KK PT    N+
Sbjct: 680 KKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNY 722


>UniRef50_Q7RSB9 Cluster: Putative uncharacterized protein PY00442;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY00442 - Plasmodium yoelii
           yoelii
          Length = 689

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -2

Query: 345 INTKYKKKTSYKIFEKLYRSPNEKLFNINQFISRSPNICIYVTHNLN 205
           +NTK KK T+Y +F+ +Y S N    N+N F++   N   Y+    N
Sbjct: 219 LNTK-KKSTNY-LFDSVYNSENNDEINLNYFLNNKKNNDYYIFSEKN 263


>UniRef50_Q241M9 Cluster: Response regulator receiver domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Response regulator receiver domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1459

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -2

Query: 339 TKYKKKTSYKIFEKLYRSPNEKLFNINQFISRSPNICIYVTHNLNYQ 199
           TK  KK  Y + EK+ +    K+FN  +F S + NIC +   N + Q
Sbjct: 380 TKKSKKYLYSLSEKVGQISENKVFNERKFYSMNQNICKFSFQNQHDQ 426


>UniRef50_A7BRA1 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. PS
          Length = 68

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +3

Query: 333 ILY*LIIDGINCLSSRLLDKIFGTFLCFSFEMFYVKKKKNFPIGRFGLRLCFNV 494
           I+Y   I GI C SS+    +FGT LCF F  FY    +N+   +   +L  N+
Sbjct: 4   IIYFTHIRGILCWSSKR-SFVFGTKLCFGFHTFYRISIQNWKFAKLCCKLHRNL 56


>UniRef50_Q8I3K3 Cluster: Putative uncharacterized protein PFE1305c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE1305c - Plasmodium falciparum
           (isolate 3D7)
          Length = 395

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = -2

Query: 372 INNLSHQ*SINTKYKKKTSYKIFEKLYRSPNEKLFNINQFISRSPN 235
           INN+++  + N  YK  +S + F+K+  + ++K  N N  +S SPN
Sbjct: 225 INNINNNNNNNLSYKNLSSLEEFKKINTNKDDKNNNNNNNMSHSPN 270


>UniRef50_Q6LFN9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 466

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 21/59 (35%), Positives = 34/59 (57%)
 Frame = +2

Query: 365 LFIKQIVGQNLRNISVLFF*NVLCKKKKKLPNRQVRA*AVFQCNLNVEIQYYK*KKKKN 541
           LF +QIV  NL N  + +F  +  KK K L N +++   + +C+ + +I  YK  K+KN
Sbjct: 312 LFNEQIVNANL-NTHIHYFKQIKNKKLKILKN-EIKKNEMNECSFSPQINIYKKCKQKN 368


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,222,885
Number of Sequences: 1657284
Number of extensions: 11141510
Number of successful extensions: 23858
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23844
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)