BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0549 (643 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z83234-4|CAB70168.1| 367|Caenorhabditis elegans Hypothetical pr... 28 4.9 Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 28 4.9 AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical ... 28 4.9 U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 27 8.6 U50068-3|AAD47115.1| 389|Caenorhabditis elegans Hypothetical pr... 27 8.6 >Z83234-4|CAB70168.1| 367|Caenorhabditis elegans Hypothetical protein K09E4.1 protein. Length = 367 Score = 28.3 bits (60), Expect = 4.9 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = +2 Query: 467 VRA*AVFQCNLNVEIQYYK*KKKKNSTPLIDNQWRFSVFVHFISNSPKCF 616 VRA A F C + E+Q ++ + + L D+ W S++ +CF Sbjct: 97 VRAEAAFLCKVEAELQDWRLFSQVHKIFLTDDAWHMSLYFRGGPTLEQCF 146 >Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical protein F20D1.2 protein. Length = 641 Score = 28.3 bits (60), Expect = 4.9 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +2 Query: 8 FVKSYKV*NLIMYDETEKFSISLLYYLCVCTSVTEACHY 124 FV S+ + + + DE EKF I+L C TS + HY Sbjct: 338 FVSSFNLDCVAIVDEPEKFEIALNSLECYKTSRRDEDHY 376 >AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical protein T05E7.5 protein. Length = 381 Score = 28.3 bits (60), Expect = 4.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 312 KIFEKLYRSPNEKLFNINQFISRSPNICIYVTHNLNYQ 199 K FE+ E N+N+FI R IC+ V + LN + Sbjct: 194 KNFEEYKERMTEVEKNLNEFIKRQSAICMGVRYELNME 231 >U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical protein C46A5.4 protein. Length = 1432 Score = 27.5 bits (58), Expect = 8.6 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -2 Query: 384 TICLINNLSHQ*SINTKYKKKTSYKIFEKLYRSPNE 277 T C +++ S ++ T +K + FE+LY SP + Sbjct: 502 TFCKLDDFSSFLALQTIFKPSVNISDFERLYESPED 537 >U50068-3|AAD47115.1| 389|Caenorhabditis elegans Hypothetical protein C01G5.6 protein. Length = 389 Score = 27.5 bits (58), Expect = 8.6 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -2 Query: 330 KKKTSYKIFEKLYRSPNEKLFNINQFISRSPN 235 KK +YK FE+++RS E+ + + I +PN Sbjct: 176 KKDMTYKEFEQMFRSYVEEEVHKEEIIKNNPN 207 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,120,514 Number of Sequences: 27780 Number of extensions: 293669 Number of successful extensions: 668 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 650 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 668 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1427403330 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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