Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0549
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83234-4|CAB70168.1|  367|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF003150-4|AAB54217.1|  381|Caenorhabditis elegans Hypothetical ...    28   4.9  
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U50068-3|AAD47115.1|  389|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z83234-4|CAB70168.1|  367|Caenorhabditis elegans Hypothetical
           protein K09E4.1 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 467 VRA*AVFQCNLNVEIQYYK*KKKKNSTPLIDNQWRFSVFVHFISNSPKCF 616
           VRA A F C +  E+Q ++   + +   L D+ W  S++        +CF
Sbjct: 97  VRAEAAFLCKVEAELQDWRLFSQVHKIFLTDDAWHMSLYFRGGPTLEQCF 146


>Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical
           protein F20D1.2 protein.
          Length = 641

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 8   FVKSYKV*NLIMYDETEKFSISLLYYLCVCTSVTEACHY 124
           FV S+ +  + + DE EKF I+L    C  TS  +  HY
Sbjct: 338 FVSSFNLDCVAIVDEPEKFEIALNSLECYKTSRRDEDHY 376


>AF003150-4|AAB54217.1|  381|Caenorhabditis elegans Hypothetical
           protein T05E7.5 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 312 KIFEKLYRSPNEKLFNINQFISRSPNICIYVTHNLNYQ 199
           K FE+      E   N+N+FI R   IC+ V + LN +
Sbjct: 194 KNFEEYKERMTEVEKNLNEFIKRQSAICMGVRYELNME 231


>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
           protein C46A5.4 protein.
          Length = 1432

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 384 TICLINNLSHQ*SINTKYKKKTSYKIFEKLYRSPNE 277
           T C +++ S   ++ T +K   +   FE+LY SP +
Sbjct: 502 TFCKLDDFSSFLALQTIFKPSVNISDFERLYESPED 537


>U50068-3|AAD47115.1|  389|Caenorhabditis elegans Hypothetical
           protein C01G5.6 protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 330 KKKTSYKIFEKLYRSPNEKLFNINQFISRSPN 235
           KK  +YK FE+++RS  E+  +  + I  +PN
Sbjct: 176 KKDMTYKEFEQMFRSYVEEEVHKEEIIKNNPN 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,120,514
Number of Sequences: 27780
Number of extensions: 293669
Number of successful extensions: 668
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)