BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0548 (616 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 71 1e-14 AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 65 5e-13 AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 61 6e-12 AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 56 2e-10 AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 56 2e-10 AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 3.6 EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 22 4.7 AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 22 4.7 AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 4.7 AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 4.7 AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 8.2 >AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nuclear receptor protein. Length = 407 Score = 70.5 bits (165), Expect = 1e-14 Identities = 27/51 (52%), Positives = 39/51 (76%) Frame = +3 Query: 342 GTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSI 494 G+ LC +CGD+ASG HYGV+SCEGCKGFF+R++++ + Y C + + C I Sbjct: 81 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSY-ACREEKNCII 130 Score = 40.3 bits (90), Expect = 1e-05 Identities = 15/32 (46%), Positives = 24/32 (75%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 601 +NRCQYCR +KC+ +GM R+AV+ R +++ Sbjct: 135 RNRCQYCRYQKCLNMGMKREAVQEERQRTKDR 166 >AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor (isoform A) protein. Length = 549 Score = 64.9 bits (151), Expect = 5e-13 Identities = 27/47 (57%), Positives = 32/47 (68%) Frame = +3 Query: 354 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSI 494 LC VCGD+ASG+HY +CEGCKGFFRRSI + Y+ C C I Sbjct: 187 LCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQ-CKYGNNCEI 232 Score = 33.5 bits (73), Expect = 0.001 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAV 571 + +CQ CRLKKC++VGM + V Sbjct: 237 RRKCQECRLKKCLSVGMRPECV 258 >AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger transcription factor protein. Length = 228 Score = 61.3 bits (142), Expect = 6e-12 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = +3 Query: 354 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509 LC+VCG+ A+GFH+G +CEGCK FF R+ C N +C I + NR Sbjct: 4 LCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNISSISECKNNGECVINKKNR 55 Score = 36.7 bits (81), Expect = 2e-04 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +2 Query: 515 CQYCRLKKCIAVGMSRDAVRFGR 583 C+ CRL+KC+ VGMS+ R+GR Sbjct: 58 CKACRLRKCLLVGMSKSGSRYGR 80 >AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless protein. Length = 302 Score = 56.4 bits (130), Expect = 2e-10 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Frame = +3 Query: 357 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQ-QCSILRINR 509 C+VCGD +SG HY + +C+GC GFF+RSI++ QY K++ C I + +R Sbjct: 38 CKVCGDFSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDKTHR 89 Score = 41.1 bits (92), Expect = 7e-06 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 607 +N+C+ CRLKKC VGM++DAV+ R P+ R Sbjct: 89 RNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122 >AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog protein. Length = 406 Score = 56.4 bits (130), Expect = 2e-10 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Frame = +3 Query: 357 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQ-QCSILRINR 509 C+VCGD +SG HY + +C+GC GFF+RSI++ QY K++ C I + +R Sbjct: 38 CKVCGDFSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDKTHR 89 Score = 41.1 bits (92), Expect = 7e-06 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 607 +N+C+ CRLKKC VGM++DAV+ R P+ R Sbjct: 89 RNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122 >AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neuroblasts defectiveprotein protein. Length = 224 Score = 22.2 bits (45), Expect = 3.6 Identities = 5/19 (26%), Positives = 11/19 (57%) Frame = +1 Query: 553 NEQRCCAIRSCTQTRESAY 609 N +CC +R+C+ + + Sbjct: 186 NGNKCCCLRTCSSAKRPKF 204 >EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxylase protein. Length = 532 Score = 21.8 bits (44), Expect = 4.7 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = -3 Query: 248 LLSGDITRVFLTTMLDAIY*SSPALHCT 165 L+ ++TRV L ++ ++ SS HCT Sbjct: 155 LVKVEMTRVSLLQLIKSLRQSSSLEHCT 182 >AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 protein. Length = 533 Score = 21.8 bits (44), Expect = 4.7 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = +2 Query: 347 HGSVPRLWRQGQWV 388 HG VP ++ QWV Sbjct: 330 HGKVPYAYKGNQWV 343 >AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor candidate 59 protein. Length = 489 Score = 21.8 bits (44), Expect = 4.7 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +3 Query: 270 TSVDHSLMSSMHKEREPE 323 TS +HSL S H ++ P+ Sbjct: 471 TSTEHSLSQSQHIQKIPK 488 >AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor candidate 25 protein. Length = 314 Score = 21.8 bits (44), Expect = 4.7 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +3 Query: 270 TSVDHSLMSSMHKEREPE 323 TS +HSL S H ++ P+ Sbjct: 296 TSTEHSLSQSQHIQKIPK 313 >AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor protein protein. Length = 585 Score = 21.0 bits (42), Expect = 8.2 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 355 RTVVPSNSICNSGS 314 R VVP +CN+G+ Sbjct: 147 RKVVPLKKLCNNGT 160 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 146,607 Number of Sequences: 336 Number of extensions: 3005 Number of successful extensions: 16 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 15666150 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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