Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0548
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    71   1e-14
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    65   5e-13
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    61   6e-12
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    56   2e-10
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    56   2e-10
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.2  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 70.5 bits (165), Expect = 1e-14
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = +3

Query: 342 GTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSI 494
           G+  LC +CGD+ASG HYGV+SCEGCKGFF+R++++ + Y  C + + C I
Sbjct: 81  GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSY-ACREEKNCII 130



 Score = 40.3 bits (90), Expect = 1e-05
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = +2

Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 601
           +NRCQYCR +KC+ +GM R+AV+  R   +++
Sbjct: 135 RNRCQYCRYQKCLNMGMKREAVQEERQRTKDR 166


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 64.9 bits (151), Expect = 5e-13
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +3

Query: 354 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSI 494
           LC VCGD+ASG+HY   +CEGCKGFFRRSI +   Y+ C     C I
Sbjct: 187 LCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQ-CKYGNNCEI 232



 Score = 33.5 bits (73), Expect = 0.001
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 506 QNRCQYCRLKKCIAVGMSRDAV 571
           + +CQ CRLKKC++VGM  + V
Sbjct: 237 RRKCQECRLKKCLSVGMRPECV 258


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 61.3 bits (142), Expect = 6e-12
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = +3

Query: 354 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509
           LC+VCG+ A+GFH+G  +CEGCK FF R+         C  N +C I + NR
Sbjct: 4   LCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNISSISECKNNGECVINKKNR 55



 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +2

Query: 515 CQYCRLKKCIAVGMSRDAVRFGR 583
           C+ CRL+KC+ VGMS+   R+GR
Sbjct: 58  CKACRLRKCLLVGMSKSGSRYGR 80


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +3

Query: 357 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQ-QCSILRINR 509
           C+VCGD +SG HY + +C+GC GFF+RSI++  QY    K++  C I + +R
Sbjct: 38  CKVCGDFSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDKTHR 89



 Score = 41.1 bits (92), Expect = 7e-06
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 607
           +N+C+ CRLKKC  VGM++DAV+  R P+    R
Sbjct: 89  RNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +3

Query: 357 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQ-QCSILRINR 509
           C+VCGD +SG HY + +C+GC GFF+RSI++  QY    K++  C I + +R
Sbjct: 38  CKVCGDFSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDKTHR 89



 Score = 41.1 bits (92), Expect = 7e-06
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 607
           +N+C+ CRLKKC  VGM++DAV+  R P+    R
Sbjct: 89  RNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = +1

Query: 553 NEQRCCAIRSCTQTRESAY 609
           N  +CC +R+C+  +   +
Sbjct: 186 NGNKCCCLRTCSSAKRPKF 204


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 248 LLSGDITRVFLTTMLDAIY*SSPALHCT 165
           L+  ++TRV L  ++ ++  SS   HCT
Sbjct: 155 LVKVEMTRVSLLQLIKSLRQSSSLEHCT 182


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 347 HGSVPRLWRQGQWV 388
           HG VP  ++  QWV
Sbjct: 330 HGKVPYAYKGNQWV 343


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 270 TSVDHSLMSSMHKEREPE 323
           TS +HSL  S H ++ P+
Sbjct: 471 TSTEHSLSQSQHIQKIPK 488


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 270 TSVDHSLMSSMHKEREPE 323
           TS +HSL  S H ++ P+
Sbjct: 296 TSTEHSLSQSQHIQKIPK 313


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 355 RTVVPSNSICNSGS 314
           R VVP   +CN+G+
Sbjct: 147 RKVVPLKKLCNNGT 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,607
Number of Sequences: 336
Number of extensions: 3005
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)