BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0548 (616 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_02_0398 + 8559332-8559718,8561264-8561386,8561537-8561581,856... 29 3.9 01_06_0515 - 29959149-29959253,29959510-29959633,29959702-299597... 29 3.9 07_03_0419 - 17993478-17993777,17994045-17994195,17994799-179950... 28 5.1 02_03_0204 - 16369800-16371758,16372260-16372331 28 5.1 11_04_0282 - 15748713-15748764,15749213-15749293,15749439-157495... 28 6.8 04_04_1535 + 34205426-34205593,34205697-34206869 28 6.8 01_01_0233 - 1957104-1958041,1958213-1958467,1959420-1960136,196... 28 6.8 11_06_0623 - 25607386-25607569,25608040-25608182,25608262-256085... 27 8.9 09_01_0044 + 796237-796327,797025-797079,798129-798639 27 8.9 07_01_1207 + 11511754-11513865 27 8.9 >09_02_0398 + 8559332-8559718,8561264-8561386,8561537-8561581, 8562215-8562290,8562398-8562510,8562774-8562821, 8563101-8563229 Length = 306 Score = 28.7 bits (61), Expect = 3.9 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +3 Query: 249 LRRYDVPTSVDHSLMSSMHKEREPELHIEFDGTTVLCRVCGDKASGFHY 395 +RR + +DH++ M E L + V CR+CGD +SG + Sbjct: 158 VRRTIFVSDIDHTVTEDMLAE----LFGSYCSVVVDCRICGDHSSGLRF 202 >01_06_0515 - 29959149-29959253,29959510-29959633,29959702-29959793, 29959921-29960003,29960573-29960654,29960707-29960784, 29960875-29960967,29961647-29961734,29961822-29961991 Length = 304 Score = 28.7 bits (61), Expect = 3.9 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = +3 Query: 351 VLCRVCGDKAS-GFHYGVHSCEGCKGFFRRSI 443 +LC CG + FH H C+ CK + R I Sbjct: 273 ILCNDCGATSEVQFHLIAHKCQKCKSYNTRQI 304 >07_03_0419 - 17993478-17993777,17994045-17994195,17994799-17995036, 17995133-17995343,17995440-17995618,17995735-17995833, 17996646-17997531 Length = 687 Score = 28.3 bits (60), Expect = 5.1 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 561 LLIPTAMHFFSRQYWHRFC*S*GYYTAGSSCRAGI 457 LL+P A W +C S G YTAGS +A + Sbjct: 14 LLLPLAAIASGDPPWQHYCGSSGNYTAGSKYQANL 48 >02_03_0204 - 16369800-16371758,16372260-16372331 Length = 676 Score = 28.3 bits (60), Expect = 5.1 Identities = 10/24 (41%), Positives = 19/24 (79%) Frame = -1 Query: 604 RFLAFGYTTESHSISAHSDGDAFF 533 R++A GY +++HS+SA G+++F Sbjct: 132 RWVAEGYISKTHSLSAEEVGESYF 155 >11_04_0282 - 15748713-15748764,15749213-15749293,15749439-15749522, 15749623-15749788,15751098-15751245 Length = 176 Score = 27.9 bits (59), Expect = 6.8 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -1 Query: 442 IDRRKKPLQPSQEWTP*WNPL 380 I R + L PSQ+W P W PL Sbjct: 25 IIRLQHHLDPSQQWPPLWQPL 45 >04_04_1535 + 34205426-34205593,34205697-34206869 Length = 446 Score = 27.9 bits (59), Expect = 6.8 Identities = 20/75 (26%), Positives = 34/75 (45%) Frame = -1 Query: 379 ALSPQTRHRTVVPSNSICNSGSRSLCIELIKEWSTDVGTS*RRSYYPETSLEYF*QQCSM 200 AL+ + + + S++ +S R C+EL++ DV R + P + +C+ Sbjct: 345 ALAKTGKLQNLSLSDNYFHSVGRRHCLELVRSKVLDV----RLNCIPNFPHQRPALECAR 400 Query: 199 LYISPPPHCTARTPH 155 Y PP HC PH Sbjct: 401 FYADPPQHCPF-VPH 414 >01_01_0233 - 1957104-1958041,1958213-1958467,1959420-1960136, 1960728-1961403 Length = 861 Score = 27.9 bits (59), Expect = 6.8 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +3 Query: 432 RRSIQQKIQYRPCTKNQQCSILRINRIGASIAD*KNASPSE*AEMLCDSVVY 587 R I++ ++ C KN +C ++N KNASP E + +L DS+ Y Sbjct: 795 RPPIKEVVEVLNCIKNGECPAEKMN---------KNASPKEDSHLLKDSLQY 837 >11_06_0623 - 25607386-25607569,25608040-25608182,25608262-25608513, 25609239-25609754 Length = 364 Score = 27.5 bits (58), Expect = 8.9 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +3 Query: 375 KASGFHYGVHSCEG 416 K SGF+YGV++C G Sbjct: 303 KGSGFYYGVYNCSG 316 >09_01_0044 + 796237-796327,797025-797079,798129-798639 Length = 218 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/54 (25%), Positives = 21/54 (38%) Frame = +1 Query: 451 RYNTGPARRTSSVVSSGLTESVPVLPTEKMHRRRNEQRCCAIRSCTQTRESAYP 612 R G R T++ S+ + PT + R + +RCC C T P Sbjct: 130 RGKEGEGRVTATTSSAAPQPLISFHPTNRSGRGKGRRRCCRHSLCCSTATDLLP 183 >07_01_1207 + 11511754-11513865 Length = 703 Score = 27.5 bits (58), Expect = 8.9 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = -1 Query: 616 CEDTRFLAFGYTTESHSISAHSDGDAFFQS 527 C + R L G H+ A DG+ FFQ+ Sbjct: 183 CAEARELVLGRAVHMHAAGAGMDGNLFFQN 212 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,617,917 Number of Sequences: 37544 Number of extensions: 368950 Number of successful extensions: 972 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 947 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 972 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1478421500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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