BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0548 (616 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_12110| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 9e-15 SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44) 73 2e-13 SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12 SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) 65 4e-11 SB_14472| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11 SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0) 64 9e-11 SB_20447| Best HMM Match : zf-C4 (HMM E-Value=2.09999e-41) 63 2e-10 SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10 SB_30131| Best HMM Match : zf-C4 (HMM E-Value=8.39938e-42) 63 2e-10 SB_58027| Best HMM Match : zf-C4 (HMM E-Value=0) 63 2e-10 SB_9970| Best HMM Match : zf-C4 (HMM E-Value=9.4e-38) 62 5e-10 SB_36879| Best HMM Match : Hormone_recep (HMM E-Value=0) 60 1e-09 SB_4250| Best HMM Match : zf-C4 (HMM E-Value=2.3e-39) 58 4e-09 SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40) 56 2e-08 SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37) 55 4e-08 SB_33135| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06 SB_32228| Best HMM Match : zf-C4 (HMM E-Value=6.2e-23) 42 3e-04 SB_8164| Best HMM Match : rve (HMM E-Value=0.00069) 29 2.3 SB_30743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_31470| Best HMM Match : SAND (HMM E-Value=5e-37) 29 4.0 SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 4.0 SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 28 6.9 SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 28 6.9 SB_36311| Best HMM Match : Pox_A32 (HMM E-Value=0.16) 28 6.9 SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_6891| Best HMM Match : Bac_chlorC (HMM E-Value=3.7) 28 6.9 SB_6884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_39464| Best HMM Match : 7tm_1 (HMM E-Value=4e-39) 28 6.9 SB_13543| Best HMM Match : DUF1020 (HMM E-Value=0.44) 28 6.9 SB_7171| Best HMM Match : Nodulin_late (HMM E-Value=0.25) 28 6.9 >SB_12110| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 360 Score = 77.4 bits (182), Expect = 9e-15 Identities = 29/53 (54%), Positives = 43/53 (81%) Frame = +3 Query: 354 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRI 512 +C +CGD++SGFHYGV SCEGCK FF+R++Q+++QY C +++ C I + NRI Sbjct: 13 VCAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLQY-ACVESKSCQIDKNNRI 64 Score = 42.7 bits (96), Expect = 2e-04 Identities = 16/26 (61%), Positives = 21/26 (80%) Frame = +2 Query: 512 RCQYCRLKKCIAVGMSRDAVRFGRVP 589 RCQYCR +KC+A+GM ++AVR R P Sbjct: 65 RCQYCRFQKCLALGMLKEAVREDRAP 90 >SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44) Length = 1220 Score = 72.9 bits (171), Expect = 2e-13 Identities = 32/77 (41%), Positives = 48/77 (62%) Frame = +3 Query: 264 VPTSVDHSLMSSMHKEREPELHIEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSI 443 + +D + S +E +P+ G C VC DKA+G+HYGV +CEGCKGFF+R++ Sbjct: 798 ITPKIDPTSPKSEEQETKPQ------GAPPACVVCNDKATGYHYGVFTCEGCKGFFKRTV 851 Query: 444 QQKIQYRPCTKNQQCSI 494 Q++++Y C NQ C I Sbjct: 852 QKQLEY-TCRGNQDCDI 867 Score = 35.9 bits (79), Expect = 0.026 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRF 577 +NRCQYCR +KC+ GM + + F Sbjct: 872 RNRCQYCRFEKCVKSGMLKQGMSF 895 >SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 420 Score = 69.3 bits (162), Expect = 2e-12 Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%) Frame = +3 Query: 351 VLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQC--SILRINRIGASI 524 VLCRVCGD++SG HYGV +C+GC+GFF+RSI++ + Y C + +C + R N+ AS+ Sbjct: 21 VLCRVCGDRSSGKHYGVFTCDGCRGFFKRSIRRNLTYH-CKELGKCVVDVARRNQCPASV 79 >SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) Length = 438 Score = 65.3 bits (152), Expect = 4e-11 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = +3 Query: 267 PTSVDHSLMSSMHKEREPELHIEFDGTTVL--CRVCGDKASGFHYGVHSCEGCKGFFRRS 440 P +V+ S S + +P+ + C VCGDK+SG HYGV++CEGCK FF+RS Sbjct: 47 PDTVESSHPSEDFSDNDPDSPASSSSKPLYIDCAVCGDKSSGKHYGVYTCEGCKSFFKRS 106 Query: 441 IQQKIQYRPCTKNQQCSILRINR 509 I++ + Y C + C + NR Sbjct: 107 IRRSLSY-SCRGVRNCPVDIQNR 128 Score = 50.0 bits (114), Expect = 1e-06 Identities = 22/34 (64%), Positives = 27/34 (79%), Gaps = 2/34 (5%) Frame = +2 Query: 494 PQD*QNR--CQYCRLKKCIAVGMSRDAVRFGRVP 589 P D QNR CQYCRLKKC+ VGM ++AV+ GR+P Sbjct: 122 PVDIQNRNQCQYCRLKKCLKVGMRKEAVQKGRIP 155 >SB_14472| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 603 Score = 64.9 bits (151), Expect = 5e-11 Identities = 26/48 (54%), Positives = 35/48 (72%) Frame = +3 Query: 351 VLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSI 494 V C VCGDK+SG HYGV +CEGCK FF+RS+++ + Y C ++ C I Sbjct: 241 VECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLTY-TCRASRDCPI 287 Score = 50.4 bits (115), Expect = 1e-06 Identities = 19/28 (67%), Positives = 25/28 (89%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVP 589 +N+CQYCRLKKC+ VGM R+AV+ GR+P Sbjct: 292 RNQCQYCRLKKCLKVGMRREAVQRGRIP 319 >SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0) Length = 553 Score = 64.1 bits (149), Expect = 9e-11 Identities = 27/52 (51%), Positives = 35/52 (67%) Frame = +3 Query: 354 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509 +C +C DKA+G HYGV SCEGCKGFF+RS+Q K Y + C I + +R Sbjct: 197 ICAICLDKATGQHYGVTSCEGCKGFFKRSVQNKKDYTCRNLTKDCPIDKRHR 248 Score = 44.0 bits (99), Expect = 1e-04 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVP 589 +NRCQYCR +KCI GM ++AVR R P Sbjct: 248 RNRCQYCRFQKCIQAGMIKEAVREDRTP 275 >SB_20447| Best HMM Match : zf-C4 (HMM E-Value=2.09999e-41) Length = 419 Score = 63.3 bits (147), Expect = 2e-10 Identities = 24/51 (47%), Positives = 37/51 (72%) Frame = +3 Query: 357 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509 C+VCGD +G HYGV +CEGCKGFF+R++++ + Y C + C I +++R Sbjct: 42 CKVCGDNGTGKHYGVVACEGCKGFFKRTVRKNLIY-TCRGSNDCFIDKVHR 91 Score = 31.1 bits (67), Expect = 0.74 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRD 565 +NRCQ CR KC+ GM ++ Sbjct: 91 RNRCQKCRFVKCLTAGMKKE 110 >SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1027 Score = 63.3 bits (147), Expect = 2e-10 Identities = 25/52 (48%), Positives = 37/52 (71%) Frame = +3 Query: 354 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509 +C VC D+ASG HYGV +CEGCKGFF+RS+++ + Y C + C + ++ R Sbjct: 736 ICLVCNDRASGRHYGVMTCEGCKGFFKRSVRRNMVYH-CMFRETCIVDKVLR 786 Score = 42.3 bits (95), Expect = 3e-04 Identities = 16/28 (57%), Positives = 22/28 (78%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVP 589 +NRCQ CR+ KC+AVGM + AV++ R P Sbjct: 786 RNRCQKCRMDKCLAVGMQKSAVQYERRP 813 >SB_30131| Best HMM Match : zf-C4 (HMM E-Value=8.39938e-42) Length = 311 Score = 63.3 bits (147), Expect = 2e-10 Identities = 24/48 (50%), Positives = 36/48 (75%) Frame = +3 Query: 351 VLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSI 494 +LC+VCGD +SG HYGV++C+GC GFF RS+++ + Y C N C++ Sbjct: 33 ILCKVCGDISSGRHYGVYTCDGCSGFFMRSVRRDMVY-TCKGNGGCTV 79 Score = 35.5 bits (78), Expect = 0.034 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVP 589 +N+CQ CR KKC+ V M+R AV+ R P Sbjct: 84 RNQCQACRFKKCLEVKMNRFAVQQERQP 111 >SB_58027| Best HMM Match : zf-C4 (HMM E-Value=0) Length = 396 Score = 62.9 bits (146), Expect = 2e-10 Identities = 26/53 (49%), Positives = 35/53 (66%) Frame = +3 Query: 351 VLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509 V C VCGDK++G HYGV +CEGCK FF+R+++ Y C C+I R +R Sbjct: 55 VACAVCGDKSTGKHYGVSTCEGCKSFFKRTVRNNTNY-TCRGQNTCAIDRNSR 106 Score = 34.3 bits (75), Expect = 0.080 Identities = 11/28 (39%), Positives = 21/28 (75%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVP 589 ++RC CR +KC++ GM ++AV+ ++P Sbjct: 106 RSRCPSCRFQKCLSTGMKKEAVQTTKLP 133 >SB_9970| Best HMM Match : zf-C4 (HMM E-Value=9.4e-38) Length = 259 Score = 61.7 bits (143), Expect = 5e-10 Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 2/53 (3%) Frame = +3 Query: 357 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQY--RPCTKNQQCSILRINR 509 C+VCGD++SG HYG+++C+GC GFF+RSI++ Y R C + +I+R Sbjct: 8 CKVCGDRSSGKHYGIYACDGCSGFFKRSIRRNRSYTCRATNGKGNCPVDKIHR 60 Score = 31.9 bits (69), Expect = 0.42 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRD 565 +N+C+ CRLKKC V M++D Sbjct: 60 RNQCRSCRLKKCFDVSMNKD 79 >SB_36879| Best HMM Match : Hormone_recep (HMM E-Value=0) Length = 358 Score = 60.1 bits (139), Expect = 1e-09 Identities = 25/54 (46%), Positives = 39/54 (72%), Gaps = 3/54 (5%) Frame = +3 Query: 357 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKI--QYRPCTKNQ-QCSILRINR 509 C VCGD++SG+HYG ++CEGCK FF+R++Q+ + +Y NQ QC + + +R Sbjct: 7 CAVCGDESSGYHYGAYTCEGCKSFFKRTVQRGLVKKYSCVRSNQNQCPMDKNSR 60 Score = 27.9 bits (59), Expect = 6.9 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +2 Query: 512 RCQYCRLKKCIAVGMSRDAVR 574 +CQ CRL++C GM + VR Sbjct: 62 KCQACRLQRCFDAGMVLNGVR 82 >SB_4250| Best HMM Match : zf-C4 (HMM E-Value=2.3e-39) Length = 79 Score = 58.4 bits (135), Expect = 4e-09 Identities = 24/51 (47%), Positives = 33/51 (64%) Frame = +3 Query: 357 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509 C +C D+A+G HYG SC+GCKGFFRRS+++ Y C + C I + R Sbjct: 10 CLICADRATGKHYGASSCDGCKGFFRRSVRKNHVY-SCRFQRNCVINKDKR 59 Score = 33.1 bits (72), Expect = 0.18 Identities = 10/23 (43%), Positives = 18/23 (78%) Frame = +2 Query: 497 QD*QNRCQYCRLKKCIAVGMSRD 565 +D +N+C++CRL+KC GM ++ Sbjct: 56 KDKRNQCRFCRLRKCFRAGMKKE 78 >SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40) Length = 370 Score = 56.0 bits (129), Expect = 2e-08 Identities = 24/54 (44%), Positives = 34/54 (62%) Frame = +3 Query: 348 TVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509 T+ C VC +SG HYGV +CEGCK FF R+++ K+ Y C + C + + NR Sbjct: 19 TIECAVCSAPSSGRHYGVFTCEGCKCFFNRTVRYKLTY-ICEGSGSCRVDKQNR 71 Score = 41.1 bits (92), Expect = 7e-04 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 2/33 (6%) Frame = +2 Query: 500 D*QNR--CQYCRLKKCIAVGMSRDAVRFGRVPK 592 D QNR CQ CR KKC VGM R+A+R GR K Sbjct: 67 DKQNRTQCQACRFKKCATVGMRREAIRRGRPTK 99 >SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37) Length = 405 Score = 55.2 bits (127), Expect = 4e-08 Identities = 21/52 (40%), Positives = 35/52 (67%) Frame = +3 Query: 354 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 509 +C VCGD+++G HYGV +C+GC GFF+R+ ++++ C CS+ +R Sbjct: 23 VCVVCGDQSTGKHYGVFACDGCSGFFKRT-SRRLEPWVCKAQNACSVKTTSR 73 Score = 34.3 bits (75), Expect = 0.080 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVP 589 +N C+ CR+KKC+ VGM D GRVP Sbjct: 73 RNECKACRMKKCVEVGMKFD----GRVP 96 >SB_33135| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 364 Score = 47.6 bits (108), Expect = 8e-06 Identities = 19/34 (55%), Positives = 26/34 (76%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 607 +N CQ+CR++KC+AVGM R+AV+ R EKAR Sbjct: 73 RNSCQFCRMRKCLAVGMKREAVQQARAQDFEKAR 106 >SB_32228| Best HMM Match : zf-C4 (HMM E-Value=6.2e-23) Length = 300 Score = 42.3 bits (95), Expect = 3e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +2 Query: 506 QNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 607 +N+CQ CRL+KC + M+RDAV+ R P+ + R Sbjct: 35 RNQCQACRLRKCFEMNMNRDAVQHERAPRTSQIR 68 Score = 37.1 bits (82), Expect = 0.011 Identities = 12/30 (40%), Positives = 22/30 (73%) Frame = +3 Query: 405 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSI 494 +C+GC+GFF+RS+++ + Y+ C + C I Sbjct: 2 TCDGCRGFFKRSVRRNLAYQ-CKEKNDCPI 30 >SB_8164| Best HMM Match : rve (HMM E-Value=0.00069) Length = 1117 Score = 29.5 bits (63), Expect = 2.3 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 Query: 255 RYDVPTSVDHSLMSSMHKEREPELHIEFDGTTVLCRVCGDKAS 383 RYDV + + +S + KE E I+ + LC GDKA+ Sbjct: 84 RYDVFKTYEEIYLSKVEKEDRLEQGIQSENMRKLCSKAGDKAT 126 >SB_30743| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 185 Score = 29.1 bits (62), Expect = 3.0 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +3 Query: 222 YSSDVSG**LRRYDVPTSVDHSLMSSMHKEREPELHIEFD 341 ++S +SG R P++VD SL + K R+P+ EFD Sbjct: 4 HASMMSGKYSRARFTPSNVDESLFGDLKKTRDPDPVTEFD 43 >SB_31470| Best HMM Match : SAND (HMM E-Value=5e-37) Length = 912 Score = 28.7 bits (61), Expect = 4.0 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = -1 Query: 433 RKKPLQPSQEWTP*WNPLALSPQTRHRTVVPSNSICNSGSRSLCIELIKEWST 275 R+ S W N LS + R+ T S SG R CI+ EW T Sbjct: 154 RRDDNHKSTSWDAVINAEVLSVRCRNETAELHKSKLGSGGRGKCIKYNDEWMT 206 >SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) Length = 3810 Score = 28.7 bits (61), Expect = 4.0 Identities = 17/47 (36%), Positives = 19/47 (40%) Frame = +3 Query: 294 SSMHKEREPELHIEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGFFR 434 SS H + H + C CG AS H G SCE C G R Sbjct: 3607 SSQHCRPCAKDHFNHKQAQIACFKCGTGASAPHLGSASCE-CSGLNR 3652 >SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1008 Score = 28.3 bits (60), Expect = 5.2 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +3 Query: 255 RYDVPTSVDHSLMSSMHKEREPELHIEFDGTTVLCRVCGDKAS 383 RYDV + + +S + +E E I+ + LC GDKA+ Sbjct: 106 RYDVFKTYEELYLSKVEREDRLEQGIQSENMRKLCSKAGDKAT 148 >SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) Length = 415 Score = 27.9 bits (59), Expect = 6.9 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = +3 Query: 375 KASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKN 479 K G ++ H C C+GF + ++ YR T N Sbjct: 30 KIVGLYFSAHWCPPCRGFTPKLVEFYQNYRSKTNN 64 >SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) Length = 693 Score = 27.9 bits (59), Expect = 6.9 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +3 Query: 351 VLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQK-IQYRPCTKNQQCSILRINRIG 515 VLC+ C G Y H + C+ RSI+ K I KN C IL I ++G Sbjct: 629 VLCQQCWQMLVGVAYQEHLAQNCRFCQTRSIRYKEINIFLIWKN--CMILVIFKVG 682 >SB_36311| Best HMM Match : Pox_A32 (HMM E-Value=0.16) Length = 869 Score = 27.9 bits (59), Expect = 6.9 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +3 Query: 255 RYDVPTSVDHSLMSSMHKEREPELHIEFDGTTVLCRVCGDKAS 383 RYDV + + +S + +E E I+ + LC GDKA+ Sbjct: 33 RYDVYKTYEELYLSKVAREDRLEQGIQSENMRKLCSKAGDKAA 75 >SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 6753 Score = 27.9 bits (59), Expect = 6.9 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 324 LHIEFDG-TTVLCRVCGDKASGFHYGVHSCEGCKGF 428 + + FDG T+V C + G+ S +YG++SC+ G+ Sbjct: 594 IFMAFDGCTSVPCGIGGNCTSLDNYGLYSCQCLAGY 629 >SB_6891| Best HMM Match : Bac_chlorC (HMM E-Value=3.7) Length = 433 Score = 27.9 bits (59), Expect = 6.9 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +3 Query: 255 RYDVPTSVDHSLMSSMHKEREPELHIEFDGTTVLCRVCGDKAS 383 RYDV + + +S + +E E I+ + LC GDKA+ Sbjct: 171 RYDVYKTYEELYLSKVAREDRLEQGIQSENMRKLCSKAGDKAA 213 >SB_6884| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 384 Score = 27.9 bits (59), Expect = 6.9 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = -1 Query: 388 NPLALSPQTRHRTVVPSNSICNSGSRSLCI 299 NPL +P+ RH+ +V ++ N+ + LC+ Sbjct: 355 NPLQKNPRRRHQVIVKFDTANNTDNSGLCL 384 >SB_39464| Best HMM Match : 7tm_1 (HMM E-Value=4e-39) Length = 375 Score = 27.9 bits (59), Expect = 6.9 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 Query: 548 RRCIFSVGNTGTDSVNPEDTTLLVLRAGPVLYLLLY 441 R ++GN S N E+T LL+L +LYL+ Y Sbjct: 5 RNLTAAIGNLTGPSTNIENTPLLILIGYSLLYLVTY 40 >SB_13543| Best HMM Match : DUF1020 (HMM E-Value=0.44) Length = 850 Score = 27.9 bits (59), Expect = 6.9 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +3 Query: 255 RYDVPTSVDHSLMSSMHKEREPELHIEFDGTTVLCRVCGDKAS 383 RYDV + + +S + +E E I+ + LC GDKA+ Sbjct: 50 RYDVFKTYEELYLSKVEREDRLEQGIQSENMHKLCSKAGDKAT 92 >SB_7171| Best HMM Match : Nodulin_late (HMM E-Value=0.25) Length = 472 Score = 27.9 bits (59), Expect = 6.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 411 EGCKGFFRRSIQQKIQYRPCTKNQQCS 491 EG GF + I +K Q R C +Q+CS Sbjct: 195 EGILGFGKCQISKKRQLRGCANSQRCS 221 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,632,276 Number of Sequences: 59808 Number of extensions: 441002 Number of successful extensions: 1559 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 1396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1559 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1512078125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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