Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0546
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0883 + 8507425-8507512,8507749-8507786,8507973-8508698,850... 36 0.032
04_04_0057 + 22410167-22411330 33 0.30
06_02_0203 + 12986685-12988691 30 1.6
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 30 1.6
03_02_1016 + 13228113-13228964 30 1.6
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 2.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 2.8
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 29 2.8
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 29 2.8
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273... 29 3.6
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 29 3.6
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 29 3.6
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 3.6
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 29 4.8
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 6.4
04_04_1085 - 30719921-30719960,30720206-30720351,30720469-307205... 28 6.4
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 28 6.4
11_06_0610 - 25449085-25453284 28 8.4
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 8.4
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 8.4
>12_01_0883 +
8507425-8507512,8507749-8507786,8507973-8508698,
8508794-8508913
Length = 323
Score = 35.9 bits (79), Expect = 0.032
Identities = 28/93 (30%), Positives = 39/93 (41%)
Frame = +3
Query: 306 AHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGK 485
A D E+ A G+R R G SP P + TL Q EA D + + EG+
Sbjct: 3 AQSDRAEQEAQGRRRWRYG-SPFRPASQVLTLVQAEAEARKDTVNDRDGEEEG--EDEGE 59
Query: 486 EQIPERHRNFDPTKLKHTETCEKNPLPTKDVIE 584
++ +P TETC P P+ D +E
Sbjct: 60 MEVAAETAADEPAD-DRTETCGYTPTPSPDHVE 91
>04_04_0057 + 22410167-22411330
Length = 387
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/70 (25%), Positives = 26/70 (37%)
Frame = +3
Query: 297 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 476
P A + P RC S PP P + + D++ +D RKE RS
Sbjct: 187 PPPAAAAASPSPERSPRCQPSPPPPPPPHALVIPVEDEEDDSDEDDRKEEAVELEMLRSE 246
Query: 477 EGKEQIPERH 506
++P H
Sbjct: 247 RRAARLPRSH 256
>06_02_0203 + 12986685-12988691
Length = 668
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 331 PLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTT 432
P+P+ + +AA++AH N G EH K + TTT
Sbjct: 505 PVPNSNAIAADEAHGNATAG-EHDKKETAEQTTT 537
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +3
Query: 324 EEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGR-KESTAPDRSYRSGEGKEQIPE 500
E+P Q+ S E P EP + ++ E + D KES+ P+R S + EQ E
Sbjct: 885 EQPLENQKAAAS-EQPLEPQHEA--YEENPQEHNSDATAKESSEPERDTASDQLAEQPSE 941
Query: 501 RHRNFDPTKLKHTETCEKNPLPTKDVIEQEKSA 599
+ L+ ++ ++P + E+SA
Sbjct: 942 SRTAGEKATLRESDVVTEDPAEPQIDAAAERSA 974
>03_02_1016 + 13228113-13228964
Length = 283
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 294 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHD 428
E A AH +G + A+ +R C SG P P RS T HD
Sbjct: 214 EAARAHASNGGKHAAARR-CSSGNHQPVPRARSTTGMDSLGHGHD 257
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 149 DLKSQLEGFNTSCLRDVDTNEKIVL 223
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 27 PTESLSARIFYPLPHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 206
P SL R+ P P I +++PAP PP ++S R+P SSK P P
Sbjct: 641 PPPSLPNRLVPP-PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPP 699
Query: 207 MKR 215
R
Sbjct: 700 ANR 702
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Frame = +3
Query: 294 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGR----S*TLRQDSDEAHDDGRKESTAPDR 461
E R G G+R ESPP P + S +DS E D +E+ P
Sbjct: 60 EEESRSRRHGHHRDGGRRSLSPSESPPPPAAKRERSSSRAPRDSVERRDSADREAPPPSS 119
Query: 462 SYRSGE---GKEQIPE 500
R G G E PE
Sbjct: 120 RKRKGHEGGGNESDPE 135
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 283 KFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEK 441
K+D + ++ E QEK K + K ++ VE K +M HT+ ++
Sbjct: 262 KYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKR 314
>09_04_0329 +
16726501-16726750,16726843-16726930,16727280-16727333,
16727590-16727739,16727884-16728015,16728279-16728423,
16728514-16728552,16728638-16728712,16728935-16728994,
16729120-16729184,16729519-16729609,16729806-16729820
Length = 387
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 388 RPRGSGGLSPLRQHLCPEAGSSPESRCASAG 296
R RG+ G+ LR L P A +SP ++ A+ G
Sbjct: 54 RRRGAHGVRALRPLLLPRASASPSAKTAAGG 84
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 156 RVSSKASTPAVSVTSTPMKRLCFR 227
+VSS++S+P SVT+ ++ +CFR
Sbjct: 72 QVSSQSSSPVESVTTATLRPICFR 95
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +3
Query: 363 ESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTE 542
E P RS T R E HD S+ R G G + P H + D ++ KH E
Sbjct: 291 EEPRSKRRRS-TSRDHYQERHDRSVSPSSREQRHSYRGHGHDYYPPYH-SMDKSRRKHFE 348
Query: 543 T 545
T
Sbjct: 349 T 349
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 111 TLPP*KTSPRSPQT*RVSSKASTPAVSVTST 203
TLPP + SP SP T SSK TP+ S S+
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS 61
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +3
Query: 330 PASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 509
P++G RS E RS DE DDG + S K++ +RHR
Sbjct: 19 PSNGAAAPRSEEKERSSRRRSGG-GGGGDEERDDGERRSKRSRSEENRDRDKDKDRDRHR 77
Query: 510 NFDPTKLKHTETCEK 554
+ D + +H + E+
Sbjct: 78 DRDKDRDRHRSSRER 92
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 303 EAHRDSGEEPASGQ--RCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 476
E+ +SG+EP + SG + P P + D + DD ES+ D +
Sbjct: 328 ESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESDEDDSSDESSDEDVKQKQT 387
Query: 477 EGKE 488
+ K+
Sbjct: 388 QAKK 391
>04_04_1085 -
30719921-30719960,30720206-30720351,30720469-30720546,
30720649-30720715,30720948-30721090,30721504-30721535,
30721769-30722168,30722540-30722601,30722716-30722892,
30723078-30723201,30723590-30723760
Length = 479
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 98 CSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVL--PSAEDVATEKTRSL 265
C + DT +K PK+ +D+K Q+E + + + + + +V+ + +DV +E+ L
Sbjct: 355 CDIEDT-LIKSNPKLTSDVKVQVEAEDMAMMLQLKPEDFVVVLDENGKDVTSEQVADL 411
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 369 PPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 503
PP P GR RQ + DG+ + D S RS +G P++
Sbjct: 89 PPPPRGRRRVTRQFWNAGDYDGKPDLLGGDPSLRSDDGGGMDPDK 133
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 363 ESPPEPLGRS*TLRQDSDEAHDDGRKESTAP-DRSYRSGEGKEQI--PERHRNFDPTKLK 533
+SPP P ++ + + E H EST P ++S + E K P P+ K
Sbjct: 616 KSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPK 675
Query: 534 HTETCEKNPLPTKD 575
T EK+P PT +
Sbjct: 676 STPPTEKSP-PTPE 688
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 125 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 217
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 125 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 217
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,341,129
Number of Sequences: 37544
Number of extensions: 404700
Number of successful extensions: 1391
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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