Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0546
(711 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 63 2e-10
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 32 0.40
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 32 0.53
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 32 0.53
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 32 0.53
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_33049| Best HMM Match : 3_5_exonuc (HMM E-Value=0) 31 1.2
SB_47922| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 30 1.6
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01) 24 2.0
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 2.1
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 30 2.1
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 29 2.8
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 29 2.8
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 29 2.8
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 29 2.8
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 29 2.8
SB_14885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 29 3.7
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 29 3.7
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 29 4.9
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_26314| Best HMM Match : SURF6 (HMM E-Value=2.8) 28 6.5
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 28 6.5
SB_14743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3) 28 8.6
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +1
Query: 277 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 450
+ FD+S+LKH E QEKNPLP KD + E V+ FD +++KH TEEKNPL
Sbjct: 683 VASFDASKLKHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEEKNPL 738
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +1
Query: 277 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 450
++ F+ S+L+H ET+EKN LP KD +A EK GVE F K ++KH T EKNPL
Sbjct: 454 VKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNPL 510
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +1
Query: 277 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 450
+ KFD+S+LKH ET+EK +P KDV+ AE V+ FD +++KH T+EKNPL
Sbjct: 531 VAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVVTQEKNPL 586
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +1
Query: 250 EDQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKH 423
E + + F G+E F ++LKH ET EKNPLPD + AE + L D V FD +++KH
Sbjct: 482 EKRTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKH 541
Query: 424 TTTEEK 441
T+EK
Sbjct: 542 VETKEK 547
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +1
Query: 277 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPL 450
++ FD S+LKH ET EKNPLP V+ E + L D V FD +++KH +EKNPL
Sbjct: 643 VKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPL 702
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +1
Query: 277 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKN 444
++ FD S+LKH TQEKNPLP + E +N D V FD T++KH TT+EK+
Sbjct: 567 VKSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKS 624
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +1
Query: 277 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPL 450
+ KFD++ LKH +T+EKN LP + + E D V+ F+K++++H T+EKN L
Sbjct: 414 VAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTL 473
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 277 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 450
+ FD ++LKH TQEK+ +P ++ + E V+ FD +++KH T EKNPL
Sbjct: 607 VASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPL 662
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 277 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKA 369
++ FD S+LKH +T+EKNPLPD +A EKA
Sbjct: 719 VKTFDHSKLKHVQTEEKNPLPDAKTIAQEKA 749
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +3
Query: 423 HDDGRKESTAP-DRSYRSGEGKEQIPERH--RNFDPTKLKHTETCEKNPLPTKDVIEQEK 593
H ++++T P D + + ++ P+R ++F+ +KL+H ET EKN LPTKD I EK
Sbjct: 424 HVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK 483
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Frame = +3
Query: 423 HDDGRKESTAPD-RSYRSGEGKEQIPERHR--NFDPTKLKHTETCEKNPLPTKDVIEQE 590
H + +++ PD ++ R+ E +P+R FD +KLKH ET EK +PTKDVIE E
Sbjct: 501 HVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 41.1 bits (92), Expect = 9e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 510 NFDPTKLKHTETCEKNPLPTKDVIEQEKS 596
+FD +KLKH E EKNPLPTKD I E +
Sbjct: 685 SFDASKLKHVEVQEKNPLPTKDDITTEST 713
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +3
Query: 507 RNFDPTKLKHTETCEKNPLPTKDVIEQE 590
++FD +KLKH ET EKNPLP+ V+++E
Sbjct: 644 KSFDHSKLKHVETVEKNPLPSAAVLKEE 671
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 423 HDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTETCEKNPLPTKDVIEQEKSA 599
H + ++++ P + + E E E + FD +KLKH +T EKNPLP I QEK++
Sbjct: 693 HVEVQEKNPLPTKDDITTESTETRAEV-KTFDHSKLKHVQTEEKNPLPDAKTIAQEKAS 750
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 363 ESPPEPL-GRS*TLRQDSDEA-HDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKH 536
E PE L RS + D+ + H + +++ P + E + E ++FD +KLKH
Sbjct: 519 EMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRAEV-KSFDHSKLKH 577
Query: 537 TETCEKNPLPTKDVIEQE 590
T EKNPLPT + +E
Sbjct: 578 VVTQEKNPLPTPQTLHEE 595
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 462 SYRSGEGKEQIPERHRNFDPTKLKHTETCEKNPLPTKDVIEQE 590
+Y G K + E + FD LKH +T EKN LP+ + I+QE
Sbjct: 401 AYVDGGSKPDVSEVAK-FDAANLKHVQTKEKNTLPSDETIKQE 442
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 423 HDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTETCEKNPLPTKDVIEQE 590
H + ++++T P + + E + F KLKH ET EKNPLP I E
Sbjct: 464 HVETKEKNTLPTKDTIADEKRTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRAE 519
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +2
Query: 131 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 250
+P+V D +S++ F+TS L+ V+T EK+V+P+ + + E
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 131 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTRS 262
+PK D +S++ F+ + L+ V T EK ++PS ED+ E S
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDS 639
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3
Query: 510 NFDPTKLKHTETCEKNPLPTKDVIEQE 590
+FD TKLKH T EK+ +P+++ I++E
Sbjct: 609 SFDHTKLKHVTTQEKSIMPSQEDIKEE 635
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +2
Query: 119 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKT------RSLYSTV 277
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K S YS V
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFENSKYSQV 392
Query: 278 SRS 286
S S
Sbjct: 393 SAS 395
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 441 ESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTETCEKNPLPTKDVIEQEKS 596
E+ S R EGK + +R+R +P + TET E NP T D + E++
Sbjct: 262 ENITVSNSVRMSEGKS-VFKRNRPTEPASVPSTETKEANPNVTADTKQAEQN 312
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 259 KSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTE 435
KS+F + + + TET+E NP D AE+ ++ +G T+ K T E
Sbjct: 276 KSVFKRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTNME 334
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 269 NKDFWSSQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 135
N D S WRRLQ+ A S + + D +L A+ G W PW
Sbjct: 413 NPDIVDSLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 31.9 bits (69), Expect = 0.53
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -3
Query: 268 IKTSGLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 113
I+ +GLL+GD+F R K N+ I VD T G + FEL + + E+ GS
Sbjct: 70 IQWAGLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119
>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -3
Query: 268 IKTSGLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 161
I+ +GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 47 IQWAGLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80
>SB_33049| Best HMM Match : 3_5_exonuc (HMM E-Value=0)
Length = 470
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 414 DEAHDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTETCEKNPLPTKDVIEQE 590
D + D E T P R +G+ + RHR + +H+ ++ P+ DVI Q+
Sbjct: 370 DRSQSDSEPEDTTPLRQKGAGKDNSR-KRRHRKKTGNEAQHSAGSDEEDEPSYDVISQD 427
>SB_47922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 417 EAHDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTETCEKNPLPTKDVIEQE 590
E + + E + D S E +E + ++ +N T+ K T E NP PT D+ E++
Sbjct: 23 EVDVESKDERSCDDEDNSSTEEEECVDDKMKNQSSTQKK---TGEINPFPTSDIQEED 77
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 313 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 423
+T E++P DK A +LLDG+ FD+ + +H
Sbjct: 261 KTIEQDPTSDKSYKALRDTTHDLLDGLRDFDQAKEEH 297
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 313 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 423
+T E++P +K A +LLDG++HF + + +H
Sbjct: 163 KTIEQDPSSEKSYQALRDTTHDLLDGLQHFGQAKEEH 199
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 441 ESTAPDRSYRSGEGKEQIPERHRN 512
+STA D SY SG G E P HR+
Sbjct: 483 DSTASDSSYDSGSGPELSPNEHRS 506
>SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)
Length = 590
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 291 FEPAEAHRDSGEE 329
FEP E H DSG+E
Sbjct: 266 FEPMEIHDDSGDE 278
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 408 DSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 509
DSD+ +DD +STA R R + + P R
Sbjct: 281 DSDDDYDDREGDSTAKIRKGRRSDTDDLSPNPRR 314
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 101 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 247
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 122 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTRSLYSTVSRS 286
L DL +V +LKS+ EG CL D++ + DV E +L S VS S
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKEH-ENLKSAVSIS 1177
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +3
Query: 297 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 476
P+ RDS E S + + SPP S S + DD R R R
Sbjct: 51 PSSLGRDSSERRPSARVSSDNSRSPPHRRDSSRRSHSPSRRSSDD-RSTDARDRRDRRRS 109
Query: 477 EGKEQIPERHRNFD 518
+E+ P R R+ D
Sbjct: 110 SSRERRPPRDRDRD 123
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Frame = +1
Query: 265 LFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKT 411
L DG+ FD ++ +H + E++P +K A +LLDG+ +FD+
Sbjct: 192 LLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLDGLRYFDQA 251
Query: 412 QMKH 423
+ +H
Sbjct: 252 KEEH 255
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 322 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 423
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 75 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 108
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 322 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 423
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 173 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 206
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 322 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 423
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 320 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 353
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 313 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 423
+T E++P +K A +LLDG+ +FD+ + +H
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEH 573
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 313 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 423
+T E++P +K A +LLDG+ +FD+ +H
Sbjct: 567 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 603
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 49 ESSIPFLIKNILIHNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 183
E S+PF N N ++ +P R PQG H + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 313 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 423
+T E++P +K A +LLDG+ +FD+ +H
Sbjct: 492 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 528
>SB_14885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 376 SGGLSPLRQHLCPEAGSSPESRCASAGSNQTSRYRRIKTSGLLSG 242
+GG S L ++ AG+ PE C A + S Y G +SG
Sbjct: 102 AGGCSVLEVNVSNTAGAEPEHCCCDADYYEDSEYGGFDPVGFVSG 146
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 366 SPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTET 545
+PP+P+ R + S A ++ RS S E E+ H+ PT++ T
Sbjct: 157 TPPQPVRRQLSSPGQSVNAIQTPPRKPVNLTRSGSSEELLEKSTTSHKTSSPTRMFKRAT 216
Query: 546 CEKNPLPTK 572
E+NP K
Sbjct: 217 SERNPQQRK 225
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -1
Query: 513 SSDAVQEFVLFLLRFDSFDRGQWILFFRRRVLHLSLVEVFNSVQEVL 373
S D +FVL++LRF +D I ++ + HL+LVE + +Q+ L
Sbjct: 289 SVDDPFDFVLYMLRFSDYD----IYTGKKSIAHLTLVEFESWLQDEL 331
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 214 DCASVC*RRRH*EDQKSLFDGIEKFDSSQLKHTETQEKNPLP 339
D A++ R H +++ D +E+F S +H T +KNPLP
Sbjct: 190 DLAALSSRSDHVQEKT---DRLEQFSSQTGRHINTTKKNPLP 228
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 435 RKESTAPDRSYRSGEGKEQIPE---RHRNFDPTKLKHTETCEKNPLPTKDV 578
R++ T+P +S SG+GKE+I ++ N D +K+ K+P ++D+
Sbjct: 2295 RQQETSPKKSPNSGKGKEKILHELTQYLNSDRKVVKNKSRNVKSPQNSEDL 2345
>SB_26314| Best HMM Match : SURF6 (HMM E-Value=2.8)
Length = 222
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 235 RRRH*EDQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQ 414
++ H ED+K+ + + D + KH E ++ + +K+ EK H D H D+ +
Sbjct: 45 KKNHDEDEKNHDEDEKNHDKDEKKHDEDEKNHDEDEKNHDEDEKNHDE--DEKNH-DEDE 101
Query: 415 MKHTTTEEKN 444
H +EKN
Sbjct: 102 ENH-DEDEKN 110
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 429 DGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKH 536
DGR S DR RS E +E PER + D + KH
Sbjct: 199 DGRDRSYR-DRDRRSREEREPRPERESDRDSNRQKH 233
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 372 PEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTE 542
PEP G+ T R + D +ES AP++ + + K++ + +PT+ T+
Sbjct: 362 PEPEGKKGTKR-GKKKTSKDATEESEAPNKKRKEKKKKKKKKKASSKIEPTETAETD 417
>SB_14743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 396 TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTE 542
T D D++ +D +++AP S+ S + + RHR F L+ E
Sbjct: 85 TWDDDDDDSDEDEATKNSAPITSFFSAKTNDVTATRHRFFQERNLESLE 133
>SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +3
Query: 297 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 476
P + HR S + +G+R G+ PE R ++ + E + T G
Sbjct: 75 PEKQHRGSVHKRGNGER----GQGSPEKQQRGSVHKRGNGEGKSSPENQHTGSIYKRGKG 130
Query: 477 EGKEQIPERHR 509
EGK +HR
Sbjct: 131 EGKSSPENQHR 141
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 358 LRQHLCPEAGSSPESRCASAGSNQTSRYRR 269
L HL S P SRCA + S+ + RYRR
Sbjct: 446 LHCHLLVCNASDPNSRCAQSCSSFSRRYRR 475
>SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3)
Length = 334
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = +3
Query: 321 GEEPASGQRC----CRSGESPPEPLGRS*T-LRQDSDEAHDDGRK---ESTAPDRSYRSG 476
GEEP+S S + P P+ + + +D D+ +G + ES A DRS+ SG
Sbjct: 181 GEEPSSRTETPDLYILSNDIPTSPVDEAPLPVDEDDDDEQVNGLRMLPESVALDRSHESG 240
Query: 477 EGKEQIP 497
G +P
Sbjct: 241 RGTPHLP 247
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.9 bits (59), Expect = 8.6
Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 1/166 (0%)
Frame = +3
Query: 18 SRSPTESLSARIFYPLPHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVT 197
S SP R Y P ++ DS P+P SP P+ R S S P + +
Sbjct: 890 SPSPPPRRRRRDSYS-PSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSS 948
Query: 198 STPMKRLCFRLLKTSPLRRPEVFIRRYREV*FEPAEAHRDSGEEPASGQRCCRSGESPPE 377
P + SP RR + E + + P++ +R S S
Sbjct: 949 PLPPPQRKRASTPPSP-RRARRKVASPEEQDRQKSNGRNSRSVSPSAVKRTKGSKRSESR 1007
Query: 378 PLGRS*TL-RQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRN 512
+ RS R+ D A + + S +P R +S + + + RH++
Sbjct: 1008 SVSRSPERDRKGRDSAKKERQSHSESPQRVTKSSKERPRKRPRHQS 1053
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = -1
Query: 210 SLVSTSRRQLVLKPSS*LFRSVATLGRSFREGVSLTEQAIVNQYIFDEEGDRRFVHSATL 31
SLV TS KP L+ VA +GR F V+ T+ + + EEG + H L
Sbjct: 12 SLVGTSCSNSQEKPIQRLYNVVAVVGRHFTYRVTPTDGS--KNFKITEEGKKTLPHWLAL 69
Query: 30 SD 25
+
Sbjct: 70 DE 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,739,241
Number of Sequences: 59808
Number of extensions: 437194
Number of successful extensions: 1654
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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