BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0546
(711 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 25 2.3
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 2.3
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 25 3.1
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 24 4.1
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 23 7.2
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 23 9.5
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 531 KHTETCEKNPLPTKDVIEQEKS 596
K+T TCE LP +DV+ + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.0 bits (52), Expect = 2.3
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Frame = -3
Query: 319 ESRCASAGSNQTSRYRRIKTSGLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGD 140
+ + A S++T +++ S SG +R LFI V+ +AGV FE +Q
Sbjct: 50 DGKVAIIASSETYPVQQV-VSVTQSGIAAARINDVLFICCYVSPSAGVSEFEEVMQRIDV 108
Query: 139 LGE-----VFQGG-SVTHGA-GHCESIYF**GRG*KIRALSDSVGLR-LNTESA 2
L VF G + H A G C + +G + L DS+GL LNT +A
Sbjct: 109 LARGHPRVVFAGDLNAWHTAWGSCRTN----AKGEAVVQLVDSLGLEVLNTGTA 158
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 24.6 bits (51), Expect = 3.1
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Frame = +3
Query: 297 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAP--DRSYR 470
PA D+ G+ G S G + D DE H GRK AP R
Sbjct: 616 PAGYREDTTGSYKYGKLSSSGGASSTTHSGAPSRSQSDEDEQHSVGRK-GLAPLIQRGEG 674
Query: 471 SGEGKEQIPERHRNFDPTKLKHTETCEKNPL 563
S EGK P + K+ +T KN L
Sbjct: 675 SFEGKAMPPGKGLG-GSVKVMLQKTFHKNHL 704
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 24.2 bits (50), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 230 QTEAQSFHWCRRHGD 186
QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
dehydrogenase protein.
Length = 1325
Score = 23.4 bits (48), Expect = 7.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 237 TSPLRRPEVFIRRYREV 287
T P+RRP+V Y++V
Sbjct: 558 TDPIRRPQVHASAYKQV 574
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 23.0 bits (47), Expect = 9.5
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 379 GSGGLSPLRQHLCPEAGSSPESRCASAGSNQTSRY 275
G G SP+ H+ P + S S SN S Y
Sbjct: 197 GGGPNSPISSHMGPNSPMSSVSSPGPISSNPQSPY 231
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,695
Number of Sequences: 2352
Number of extensions: 13639
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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