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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0546
         (711 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g22795.1 68415.m02704 expressed protein                             33   0.25 
At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative si...    30   1.3  
At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containi...    30   1.7  
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f...    29   4.0  
At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase f...    29   4.0  
At2g33793.1 68415.m04145 expressed protein                             29   4.0  
At4g26630.1 68417.m03837 expressed protein                             28   5.3  
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,...    28   7.0  
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,...    28   7.0  
At1g70620.1 68414.m08138 cyclin-related contains weak similarity...    28   7.0  
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P...    27   9.3  
At3g56250.1 68416.m06251 expressed protein                             27   9.3  
At1g49980.1 68414.m05609 UMUC-like DNA repair family protein low...    27   9.3  
At1g19000.2 68414.m02364 myb family transcription factor similar...    27   9.3  
At1g19000.1 68414.m02363 myb family transcription factor similar...    27   9.3  

>At2g22795.1 68415.m02704 expressed protein
          Length = 734

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 20/77 (25%), Positives = 36/77 (46%)
 Frame = +3

Query: 324 EEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 503
           +E AS Q   +  E+  +    S +  +  ++ ++   KE +AP    +  E ++   E 
Sbjct: 549 KEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEE 608

Query: 504 HRNFDPTKLKHTETCEK 554
             + + TK K TET EK
Sbjct: 609 SASQEETKEKETETKEK 625


>At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative
           similar to sucrose-phosphate synthase isoform 1, Citrus
           unshiu, PIR:S72648
          Length = 894

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = +2

Query: 32  RVAECTNLLSPSSSKIY*FTMACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNE 211
           R+A C     P   ++  F  + S S + SL+D+  ++ +LK  L+G  +     VDTN 
Sbjct: 513 RIASCKQR-HPKWQRVE-FENSDSDSPSDSLRDINDISLNLKLSLDGEKSGSNNGVDTN- 569

Query: 212 KIVLPSAEDVATEKTRSLYSTVS 280
                 AED A E+   +   VS
Sbjct: 570 ----LDAEDRAAERKAEVEKAVS 588


>At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containing
           protein contains Pfam profile PF01388: ARID/BRIGHT DNA
           binding domain
          Length = 786

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +2

Query: 89  TMACSVSDTPSLKDLPKVATDLKSQLEGF---NTSCLRDVDTNEKIVLPSAEDVATEKTR 259
           T   S+ +  +  DLPK+  +  SQ E     + S    +DT E ++ P+AED   E   
Sbjct: 74  TSLASLEEVTNADDLPKIDDEKNSQFETSPHPSPSPSVALDTEEGLINPTAEDTVEENIV 133

Query: 260 SLYSTVSRSLI 292
           S  S VS  ++
Sbjct: 134 S--SEVSSDIL 142


>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein contains
           putative undecaprenyl diphosphate synthase domain
           [PF01255]; similar to S. cerevisiae dehydrodolichyl
           diphosphate synthetase (DEDOL-PP
           synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
          Length = 271

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 259 SGLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLG 134
           S ++ G+    +KHNL IG+D    AG  + +  LQ C ++G
Sbjct: 39  SFIMDGNRRFAKKHNL-IGLDAGHRAGFISVKYILQYCKEIG 79


>At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase
           family protein similar to pVHL-interacting
           deubiquitinating enzyme 1 type II [Homo sapiens]
           GI:18698435; contains Pfam profile PF00443: Ubiquitin
           carboxyl-terminal hydrolase
          Length = 974

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = +3

Query: 216 LCFRLLKTSPLRRPEVFIRRYREV*FEPAEAHRDSGEE-PASGQRCCRSGESPPEPLGRS 392
           L FRL+    +      IR+   +  E    +  S EE     +R     +SPP PLG +
Sbjct: 409 LLFRLITPERVFEASCSIRKILRMKGEREVKNGVSEEEREVKRKRVMERSDSPPPPLGFN 468

Query: 393 *TLRQDSDEAHDDGRKESTAPDRSYRSGEG 482
             L   ++   DD  +E     +S   G G
Sbjct: 469 NPLLPLANTYDDDDEEEENEQKKSQARGNG 498


>At2g33793.1 68415.m04145 expressed protein
          Length = 212

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
 Frame = +3

Query: 399 LRQDSDEAHDDGRKE------STAPDRSYRSGEGKEQIPERHRNFDPTKLKHTETCE 551
           L+Q  ++AH+DGRK+      S + +   +  E K ++ +  +NF     K ++ CE
Sbjct: 47  LQQFREKAHEDGRKKKEESISSVSTEVKSKIDELKSKLEKERQNFSKALSKSSKECE 103


>At4g26630.1 68417.m03837 expressed protein
          Length = 763

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/73 (26%), Positives = 32/73 (43%)
 Frame = +3

Query: 294 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRS 473
           E AE   +  EE        +S +  P+P     +  ++ DE+ +   +E+T   R  R 
Sbjct: 536 EKAEEKEEKKEEENENGIPDKSEDEAPQP-----SESEEKDESEEHSEEETTKKKRGSRL 590

Query: 474 GEGKEQIPERHRN 512
             GK++   R RN
Sbjct: 591 SAGKKESAGRARN 603


>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
           PF04484: Family of unknown function (DUF566)
          Length = 644

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 11/198 (5%)
 Frame = +3

Query: 12  VFSRSP-TESLSARIFYPLPHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSS----KAS 176
           V +R P T  +S+R   P P +   + + P+P VT P   +S +S    R  S    + S
Sbjct: 22  VATRRPRTMEVSSRYRSPTPTK---NGRCPSPSVTRPTVSSSSQSVAAKRAVSAERKRPS 78

Query: 177 TPAVSVT-STPMKRLCFRL----LKTSPLRRPE-VFIRRYREV*FEPAEAHRDSGEEPAS 338
           TP    + STP++ L   L     + S  R PE ++    R +         DS   P S
Sbjct: 79  TPPSPTSPSTPIRDLSIDLPASSRRLSTGRLPESLWPSTMRSL---SVSFQSDSVSVPVS 135

Query: 339 GQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRNFD 518
            +    S  S    L  S  + Q   +A          P+R     +GK  + +   N  
Sbjct: 136 KKERPVSSSSGDRTLRPSSNIAQ-KHKAETTSVSRKPTPERKRSPLKGKNNVSDLSENSK 194

Query: 519 PTKLKHTETCEKNPLPTK 572
           P    H+   E++  P++
Sbjct: 195 PVDGPHSRLIEQHRWPSR 212


>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
           PF04484: Family of unknown function (DUF566)
          Length = 644

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 11/198 (5%)
 Frame = +3

Query: 12  VFSRSP-TESLSARIFYPLPHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSS----KAS 176
           V +R P T  +S+R   P P +   + + P+P VT P   +S +S    R  S    + S
Sbjct: 22  VATRRPRTMEVSSRYRSPTPTK---NGRCPSPSVTRPTVSSSSQSVAAKRAVSAERKRPS 78

Query: 177 TPAVSVT-STPMKRLCFRL----LKTSPLRRPE-VFIRRYREV*FEPAEAHRDSGEEPAS 338
           TP    + STP++ L   L     + S  R PE ++    R +         DS   P S
Sbjct: 79  TPPSPTSPSTPIRDLSIDLPASSRRLSTGRLPESLWPSTMRSL---SVSFQSDSVSVPVS 135

Query: 339 GQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRNFD 518
            +    S  S    L  S  + Q   +A          P+R     +GK  + +   N  
Sbjct: 136 KKERPVSSSSGDRTLRPSSNIAQ-KHKAETTSVSRKPTPERKRSPLKGKNNVSDLSENSK 194

Query: 519 PTKLKHTETCEKNPLPTK 572
           P    H+   E++  P++
Sbjct: 195 PVDGPHSRLIEQHRWPSR 212


>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
            Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
            [Bos taurus]
          Length = 897

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 21/83 (25%), Positives = 36/83 (43%)
 Frame = +3

Query: 315  DSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQI 494
            +S ++     R  R   SP     R       SDE+ DD +++S++  ++     GK + 
Sbjct: 794  ESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSR- 852

Query: 495  PERHRNFDPTKLKHTETCEKNPL 563
              RH +      KH++   KN L
Sbjct: 853  -RRHVSSRSPHSKHSQ--HKNTL 872


>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At3g24380, At5g36840,
           At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
           At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
           At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
           At1g25886, At4g03300
          Length = 1312

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 429 DGRKESTAPDRSYRSGEGKEQIPERHRNFDPTKLKHTETCEKNPLPTKDVIEQEKS 596
           D +++  AP  S +    K+QI E     D  K ++ E C   P+P + ++E  +S
Sbjct: 364 DVKRKRNAPGPSPKEPAMKKQISE----MDCDKEENAEDCFGEPVPERFIVEMRRS 415


>At3g56250.1 68416.m06251 expressed protein 
          Length = 222

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = +2

Query: 2   RALSIQSQSDRVAECTNLLSPSSSKIY*FTMACSVSDTPSLKDLPKVATDLKSQLEGFNT 181
           R++  + Q   +A+CTN +S SS +        + S T SLK L +  T LK + +  NT
Sbjct: 5   RSVGGRIQRKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVE-QTTLKEKPKDVNT 63

Query: 182 S 184
           S
Sbjct: 64  S 64


>At1g49980.1 68414.m05609 UMUC-like DNA repair family protein low
           similarity to DNA polymerase kappa [Mus musculus]
           GI:14279087; contains Pfam profile PF00817:
           ImpB/MucB/SamB family
          Length = 785

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -3

Query: 256 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGE 131
           GL  G++    + +++    +T +AGV A  L  +VC D+ +
Sbjct: 214 GLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINK 255


>At1g19000.2 68414.m02364 myb family transcription factor similar to
           MybSt1 GI:7705206 from [Solanum tuberosum]
          Length = 285

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 256 QKSLFD-GIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD 387
           + SLFD   E      ++   TQE +PLP+ ++ + ++A Q   D
Sbjct: 160 RSSLFDITTETVTEMAMEQDPTQENSPLPETNISSGQQAMQVFTD 204


>At1g19000.1 68414.m02363 myb family transcription factor similar to
           MybSt1 GI:7705206 from [Solanum tuberosum]
          Length = 285

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 256 QKSLFD-GIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD 387
           + SLFD   E      ++   TQE +PLP+ ++ + ++A Q   D
Sbjct: 160 RSSLFDITTETVTEMAMEQDPTQENSPLPETNISSGQQAMQVFTD 204


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,416,310
Number of Sequences: 28952
Number of extensions: 303881
Number of successful extensions: 1077
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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