BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0545 (682 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.28 01_05_0164 + 18827390-18827710 31 0.84 12_01_0328 + 2535049-2535213,2536611-2537777 31 1.1 05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784 30 2.0 10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 29 2.6 08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 29 2.6 04_04_0151 + 23134467-23134627,23134657-23134803,23135413-231355... 29 2.6 01_06_1411 + 37127098-37128279 29 2.6 06_02_0113 - 11984121-11984462,11984494-11984559,11984943-119852... 29 3.4 05_06_0149 - 25991761-25993181,25993246-25993324 29 3.4 06_03_0332 + 19652207-19652995 29 4.5 04_03_0853 - 20292734-20292968,20293056-20293144,20293239-202941... 29 4.5 01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 4.5 11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 28 6.0 09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 28 6.0 06_02_0192 + 12872611-12872979 28 6.0 01_01_0219 + 1863478-1864041,1864459-1865109 28 6.0 04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 28 7.9 03_06_0090 + 31570588-31570710,31570962-31571080,31572215-315722... 28 7.9 >09_06_0277 - 21983049-21983080,21983250-21984788,21986619-21986655, 21987612-21987665,21987781-21987893,21988272-21988660, 21988783-21988903,21989245-21989342,21989963-21990153 Length = 857 Score = 32.7 bits (71), Expect = 0.28 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608 P++ P SPP T SPP IT P P D Sbjct: 616 PKITPYPSPPEVTPSPPEITPYPSPPD 642 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608 P + P SPP T SPP IT P P + Sbjct: 584 PEITPYPSPPEITPSPPEITPYPSPPE 610 Score = 29.5 bits (63), Expect = 2.6 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608 P +AP SPP SPP IT P P + Sbjct: 444 PEIAPYPSPPEIVPSPPEITPYPSPPE 470 Score = 29.1 bits (62), Expect = 3.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608 P + P SPP SPP+IT P P + Sbjct: 600 PEITPYPSPPEVVPSPPKITPYPSPPE 626 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608 P + P SPP T PP IT P P + Sbjct: 568 PEITPYPSPPEVTPGPPEITPYPSPPE 594 Score = 27.9 bits (59), Expect = 7.9 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608 P + P SPP SPP IT P P + Sbjct: 460 PEITPYPSPPEIVPSPPEITPYPSPPE 486 Score = 27.9 bits (59), Expect = 7.9 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608 P + P SPP SPP IT P P + Sbjct: 508 PEITPYPSPPEIVPSPPEITPYPSPPE 534 >01_05_0164 + 18827390-18827710 Length = 106 Score = 31.1 bits (67), Expect = 0.84 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +3 Query: 462 TADVARVESRTFICSDGRSTWSPRLAP--ARSPPWGTTSP 575 T A V +R F R+TW P LAP +R PP TT P Sbjct: 29 TVKEAAVGARGFQIRWSRTTWRPDLAPTTSRRPPATTTDP 68 >12_01_0328 + 2535049-2535213,2536611-2537777 Length = 443 Score = 30.7 bits (66), Expect = 1.1 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +3 Query: 255 VDEAFPTADHSHSKGSRVRGAQAALCQPEHVHVCDGSETEARA 383 VD F H++ + +RV G C P HV V DG E A Sbjct: 332 VDAVFAGHVHAYERFARVYGGGEDACGPVHVTVGDGGNREGLA 374 >05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784 Length = 394 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +3 Query: 516 STWSPRLAPARSPPWGTTSPPRITRRP 596 +T SPR A +PPW T PP I P Sbjct: 104 ATSSPRPASPPTPPWTTAPPPGIAAPP 130 >10_08_0570 + 18851451-18851723,18851894-18851928,18851929-18851998, 18852089-18852187,18852276-18852365,18852430-18852920, 18853015-18853102,18853204-18853245,18853548-18853574, 18853817-18853996,18854249-18854416,18854501-18854710 Length = 590 Score = 29.5 bits (63), Expect = 2.6 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTDSLVA*EVHNVRDTVLDGPC 665 PR S P SP RI RP PT LVA + + + +L PC Sbjct: 258 PRPPRRSSSPVPLPSPHRILHRPRPTSELVAGAIF-ITNRILCRPC 302 >08_02_0980 + 23255992-23256408,23256480-23256517,23256606-23256654, 23256787-23256848,23256876-23256938,23256939-23257599 Length = 429 Score = 29.5 bits (63), Expect = 2.6 Identities = 17/32 (53%), Positives = 20/32 (62%) Frame = +3 Query: 525 SPRLAPARSPPWGTTSPPRITRRPCPTDSLVA 620 SPR + + +PP SP RI RRP PT LVA Sbjct: 302 SPRRSSSPAPP---PSPRRILRRPRPTLELVA 330 >04_04_0151 + 23134467-23134627,23134657-23134803,23135413-23135512, 23135554-23135638,23135767-23136419 Length = 381 Score = 29.5 bits (63), Expect = 2.6 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = +3 Query: 528 PRLAPARSPPWGTTSPP------RITRRPCPTDSLVA*EVHNVRDTVLDGPC 665 PRL+ PP ++SP RI RRP PT LVA V +L PC Sbjct: 251 PRLSRWLRPPRRSSSPVPPLSLRRILRRPRPTPELVAGAVSVTTRRILRRPC 302 >01_06_1411 + 37127098-37128279 Length = 393 Score = 29.5 bits (63), Expect = 2.6 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 568 VVPQGGLLAGASRGDHVDLPSEHMNVRDSTRATSAVSVRANQQLSYLGSRLRVVC 404 VV G+L GAS G +D + + ++ + A +V A LS++ S + +C Sbjct: 170 VVGNSGILLGASHGALIDSHAAVFRLNNARISGFAANVGAKTNLSFINSNVLHLC 224 >06_02_0113 - 11984121-11984462,11984494-11984559,11984943-11985209, 11985327-11985776,11988134-11988208 Length = 399 Score = 29.1 bits (62), Expect = 3.4 Identities = 15/63 (23%), Positives = 28/63 (44%) Frame = -1 Query: 568 VVPQGGLLAGASRGDHVDLPSEHMNVRDSTRATSAVSVRANQQLSYLGSRLRVVCCCISX 389 ++P ++A +R + +H T A + +V S+L + +VC C+S Sbjct: 336 MLPSPNIMASMTRAVFEPVIVQHFGFSGETMADFSSAVERLSSSSFLEAEFPLVCLCLSL 395 Query: 388 XRA 380 RA Sbjct: 396 TRA 398 >05_06_0149 - 25991761-25993181,25993246-25993324 Length = 499 Score = 29.1 bits (62), Expect = 3.4 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +1 Query: 172 RRLREEDGTMCSSGDWMQPRRPPNCSAR---STKPSPQLTTLTPKVRAFVERRL 324 +R+ E G + +S DW+QP+ +A KP+P++ + P V A + R+ Sbjct: 223 KRMTEAKGVLVNSFDWLQPKALKALAAGVCVPDKPTPRVYCIGPLVDAGRKSRI 276 >06_03_0332 + 19652207-19652995 Length = 262 Score = 28.7 bits (61), Expect = 4.5 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = +3 Query: 525 SPRLAPARSPPWGTTSPPRITRRPCPTDSLVA*EVHNV 638 SP ++P+ + PW R++R P P + ++H V Sbjct: 223 SPAMSPSPTRPWTPERVARVSRSPSPVTTTATTDLHVV 260 >04_03_0853 - 20292734-20292968,20293056-20293144,20293239-20294111, 20294203-20294364 Length = 452 Score = 28.7 bits (61), Expect = 4.5 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +3 Query: 255 VDEAFPTADHSHSKGSRVRGAQAALCQPEHVHVCDGSETEARA 383 VD F H++ + +RV +A C P H+ + DG E A Sbjct: 331 VDIVFAGHVHAYERFTRVYNNEANPCGPVHITIGDGGNREGLA 373 >01_03_0117 + 12684729-12685886,12685978-12686145,12686292-12686336, 12686438-12687280 Length = 737 Score = 28.7 bits (61), Expect = 4.5 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +1 Query: 454 GQTRQTLPGLNPAR-SYAPT--GDRRGPLGSRRPEVRPGELHLPPGLREGRVRQIP 612 G++ PGL PA AP R P + +P V+P E P G RVR +P Sbjct: 76 GESPAETPGLPPAGVEDAPPRRSPREKPCPTMQPPVKPPEELSPVGAPRSRVRAMP 131 >11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216, 9096759-9096976,9097283-9097512,9097617-9097683, 9097863-9098048,9098164-9098295,9098380-9098492, 9098771-9098777 Length = 766 Score = 28.3 bits (60), Expect = 6.0 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = -1 Query: 544 AGASRGDHVDLPSEHMNVRDSTRATSAVSVRANQ 443 AGA RG+ V+L SE M++ D ++ S +V + + Sbjct: 374 AGALRGEEVELKSEIMSLVDKSKEMSKAAVDSGE 407 >09_04_0038 - 13996505-13996836,13997047-13997077,13997307-13997420, 13997546-13997686,13997787-13997851,13997943-13998039, 13998096-13998257,13998360-13998473,14001263-14001311, 14001967-14002047,14003504-14003561,14003671-14004031, 14004129-14004213,14004320-14004591,14004712-14004914, 14005419-14005494 Length = 746 Score = 28.3 bits (60), Expect = 6.0 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -1 Query: 286 EWSAVGKASSTSQSSLVGGAAASNRHLSTLCRLPHVVFGDGLKMQHVN 143 +WS +A+ S S AAA+ R + PH DG KMQ + Sbjct: 40 DWSFASRAALMSFRSSSSAAAAAAREETRELAFPHFSALDGAKMQQAS 87 >06_02_0192 + 12872611-12872979 Length = 122 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Frame = +3 Query: 462 TADVARVESRTFICSDGRSTWSPRLAP--ARSPPWGTTSP 575 T A V R F +TW P LAP +R PP TT P Sbjct: 23 TVKEAAVGDRGFQIQWSPTTWRPDLAPTTSRRPPATTTGP 62 >01_01_0219 + 1863478-1864041,1864459-1865109 Length = 404 Score = 28.3 bits (60), Expect = 6.0 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = -3 Query: 302 RTFGVRVVSCGEGFVDLAEQFGGRRGCIQSPLEHIVPSSSRSLRGWP*NA 153 R V VVS F + GRRGC+ EH +P+ LR W NA Sbjct: 283 RALAVEVVSDERYFPAFRDSCAGRRGCLID--EHYIPTLVSLLR-WRRNA 329 >04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 Length = 696 Score = 27.9 bits (59), Expect = 7.9 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 Query: 537 APARSPPWGTTSPPRITRRPCPTDS 611 APA +PP +P R+ RRP T S Sbjct: 13 APAAAPPSAVRTPRRLRRRPLKTAS 37 >03_06_0090 + 31570588-31570710,31570962-31571080,31572215-31572284, 31572544-31573492,31574789-31575699 Length = 723 Score = 27.9 bits (59), Expect = 7.9 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = -3 Query: 290 VRVVSCGEGFVDLAEQFGGRRGCIQSPLEHIVPSSSRSLRGWP*NAA 150 +R + EG + LA+ G C+ + S+ +L GWP N A Sbjct: 232 IRALRSCEGLLPLADDLGLVSRCVDAIAAKAAASTPTALFGWPINDA 278 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,141,609 Number of Sequences: 37544 Number of extensions: 422917 Number of successful extensions: 1868 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1716 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1867 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1721314888 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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