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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0545
         (682 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    33   0.28 
01_05_0164 + 18827390-18827710                                         31   0.84 
12_01_0328 + 2535049-2535213,2536611-2537777                           31   1.1  
05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784           30   2.0  
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519...    29   2.6  
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566...    29   2.6  
04_04_0151 + 23134467-23134627,23134657-23134803,23135413-231355...    29   2.6  
01_06_1411 + 37127098-37128279                                         29   2.6  
06_02_0113 - 11984121-11984462,11984494-11984559,11984943-119852...    29   3.4  
05_06_0149 - 25991761-25993181,25993246-25993324                       29   3.4  
06_03_0332 + 19652207-19652995                                         29   4.5  
04_03_0853 - 20292734-20292968,20293056-20293144,20293239-202941...    29   4.5  
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863...    29   4.5  
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909...    28   6.0  
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974...    28   6.0  
06_02_0192 + 12872611-12872979                                         28   6.0  
01_01_0219 + 1863478-1864041,1864459-1865109                           28   6.0  
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879     28   7.9  
03_06_0090 + 31570588-31570710,31570962-31571080,31572215-315722...    28   7.9  

>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608
           P++ P  SPP  T SPP IT  P P D
Sbjct: 616 PKITPYPSPPEVTPSPPEITPYPSPPD 642



 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608
           P + P  SPP  T SPP IT  P P +
Sbjct: 584 PEITPYPSPPEITPSPPEITPYPSPPE 610



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608
           P +AP  SPP    SPP IT  P P +
Sbjct: 444 PEIAPYPSPPEIVPSPPEITPYPSPPE 470



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608
           P + P  SPP    SPP+IT  P P +
Sbjct: 600 PEITPYPSPPEVVPSPPKITPYPSPPE 626



 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608
           P + P  SPP  T  PP IT  P P +
Sbjct: 568 PEITPYPSPPEVTPGPPEITPYPSPPE 594



 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608
           P + P  SPP    SPP IT  P P +
Sbjct: 460 PEITPYPSPPEIVPSPPEITPYPSPPE 486



 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTD 608
           P + P  SPP    SPP IT  P P +
Sbjct: 508 PEITPYPSPPEIVPSPPEITPYPSPPE 534


>01_05_0164 + 18827390-18827710
          Length = 106

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 462 TADVARVESRTFICSDGRSTWSPRLAP--ARSPPWGTTSP 575
           T   A V +R F     R+TW P LAP  +R PP  TT P
Sbjct: 29  TVKEAAVGARGFQIRWSRTTWRPDLAPTTSRRPPATTTDP 68


>12_01_0328 + 2535049-2535213,2536611-2537777
          Length = 443

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 255 VDEAFPTADHSHSKGSRVRGAQAALCQPEHVHVCDGSETEARA 383
           VD  F    H++ + +RV G     C P HV V DG   E  A
Sbjct: 332 VDAVFAGHVHAYERFARVYGGGEDACGPVHVTVGDGGNREGLA 374


>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
          Length = 394

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 516 STWSPRLAPARSPPWGTTSPPRITRRP 596
           +T SPR A   +PPW T  PP I   P
Sbjct: 104 ATSSPRPASPPTPPWTTAPPPGIAAPP 130


>10_08_0570 +
           18851451-18851723,18851894-18851928,18851929-18851998,
           18852089-18852187,18852276-18852365,18852430-18852920,
           18853015-18853102,18853204-18853245,18853548-18853574,
           18853817-18853996,18854249-18854416,18854501-18854710
          Length = 590

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPPRITRRPCPTDSLVA*EVHNVRDTVLDGPC 665
           PR     S P    SP RI  RP PT  LVA  +  + + +L  PC
Sbjct: 258 PRPPRRSSSPVPLPSPHRILHRPRPTSELVAGAIF-ITNRILCRPC 302


>08_02_0980 +
           23255992-23256408,23256480-23256517,23256606-23256654,
           23256787-23256848,23256876-23256938,23256939-23257599
          Length = 429

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +3

Query: 525 SPRLAPARSPPWGTTSPPRITRRPCPTDSLVA 620
           SPR + + +PP    SP RI RRP PT  LVA
Sbjct: 302 SPRRSSSPAPP---PSPRRILRRPRPTLELVA 330


>04_04_0151 +
           23134467-23134627,23134657-23134803,23135413-23135512,
           23135554-23135638,23135767-23136419
          Length = 381

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = +3

Query: 528 PRLAPARSPPWGTTSPP------RITRRPCPTDSLVA*EVHNVRDTVLDGPC 665
           PRL+    PP  ++SP       RI RRP PT  LVA  V      +L  PC
Sbjct: 251 PRLSRWLRPPRRSSSPVPPLSLRRILRRPRPTPELVAGAVSVTTRRILRRPC 302


>01_06_1411 + 37127098-37128279
          Length = 393

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = -1

Query: 568 VVPQGGLLAGASRGDHVDLPSEHMNVRDSTRATSAVSVRANQQLSYLGSRLRVVC 404
           VV   G+L GAS G  +D  +    + ++  +  A +V A   LS++ S +  +C
Sbjct: 170 VVGNSGILLGASHGALIDSHAAVFRLNNARISGFAANVGAKTNLSFINSNVLHLC 224


>06_02_0113 -
           11984121-11984462,11984494-11984559,11984943-11985209,
           11985327-11985776,11988134-11988208
          Length = 399

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/63 (23%), Positives = 28/63 (44%)
 Frame = -1

Query: 568 VVPQGGLLAGASRGDHVDLPSEHMNVRDSTRATSAVSVRANQQLSYLGSRLRVVCCCISX 389
           ++P   ++A  +R     +  +H      T A  + +V      S+L +   +VC C+S 
Sbjct: 336 MLPSPNIMASMTRAVFEPVIVQHFGFSGETMADFSSAVERLSSSSFLEAEFPLVCLCLSL 395

Query: 388 XRA 380
            RA
Sbjct: 396 TRA 398


>05_06_0149 - 25991761-25993181,25993246-25993324
          Length = 499

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +1

Query: 172 RRLREEDGTMCSSGDWMQPRRPPNCSAR---STKPSPQLTTLTPKVRAFVERRL 324
           +R+ E  G + +S DW+QP+     +A      KP+P++  + P V A  + R+
Sbjct: 223 KRMTEAKGVLVNSFDWLQPKALKALAAGVCVPDKPTPRVYCIGPLVDAGRKSRI 276


>06_03_0332 + 19652207-19652995
          Length = 262

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 525 SPRLAPARSPPWGTTSPPRITRRPCPTDSLVA*EVHNV 638
           SP ++P+ + PW      R++R P P  +    ++H V
Sbjct: 223 SPAMSPSPTRPWTPERVARVSRSPSPVTTTATTDLHVV 260


>04_03_0853 -
           20292734-20292968,20293056-20293144,20293239-20294111,
           20294203-20294364
          Length = 452

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 255 VDEAFPTADHSHSKGSRVRGAQAALCQPEHVHVCDGSETEARA 383
           VD  F    H++ + +RV   +A  C P H+ + DG   E  A
Sbjct: 331 VDIVFAGHVHAYERFTRVYNNEANPCGPVHITIGDGGNREGLA 373


>01_03_0117 +
           12684729-12685886,12685978-12686145,12686292-12686336,
           12686438-12687280
          Length = 737

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +1

Query: 454 GQTRQTLPGLNPAR-SYAPT--GDRRGPLGSRRPEVRPGELHLPPGLREGRVRQIP 612
           G++    PGL PA    AP     R  P  + +P V+P E   P G    RVR +P
Sbjct: 76  GESPAETPGLPPAGVEDAPPRRSPREKPCPTMQPPVKPPEELSPVGAPRSRVRAMP 131


>11_03_0031 -
           9094643-9095824,9095945-9096034,9096141-9096216,
           9096759-9096976,9097283-9097512,9097617-9097683,
           9097863-9098048,9098164-9098295,9098380-9098492,
           9098771-9098777
          Length = 766

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -1

Query: 544 AGASRGDHVDLPSEHMNVRDSTRATSAVSVRANQ 443
           AGA RG+ V+L SE M++ D ++  S  +V + +
Sbjct: 374 AGALRGEEVELKSEIMSLVDKSKEMSKAAVDSGE 407


>09_04_0038 -
           13996505-13996836,13997047-13997077,13997307-13997420,
           13997546-13997686,13997787-13997851,13997943-13998039,
           13998096-13998257,13998360-13998473,14001263-14001311,
           14001967-14002047,14003504-14003561,14003671-14004031,
           14004129-14004213,14004320-14004591,14004712-14004914,
           14005419-14005494
          Length = 746

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 286 EWSAVGKASSTSQSSLVGGAAASNRHLSTLCRLPHVVFGDGLKMQHVN 143
           +WS   +A+  S  S    AAA+ R  +     PH    DG KMQ  +
Sbjct: 40  DWSFASRAALMSFRSSSSAAAAAAREETRELAFPHFSALDGAKMQQAS 87


>06_02_0192 + 12872611-12872979
          Length = 122

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +3

Query: 462 TADVARVESRTFICSDGRSTWSPRLAP--ARSPPWGTTSP 575
           T   A V  R F      +TW P LAP  +R PP  TT P
Sbjct: 23  TVKEAAVGDRGFQIQWSPTTWRPDLAPTTSRRPPATTTGP 62


>01_01_0219 + 1863478-1864041,1864459-1865109
          Length = 404

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -3

Query: 302 RTFGVRVVSCGEGFVDLAEQFGGRRGCIQSPLEHIVPSSSRSLRGWP*NA 153
           R   V VVS    F    +   GRRGC+    EH +P+    LR W  NA
Sbjct: 283 RALAVEVVSDERYFPAFRDSCAGRRGCLID--EHYIPTLVSLLR-WRRNA 329


>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
          Length = 696

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 537 APARSPPWGTTSPPRITRRPCPTDS 611
           APA +PP    +P R+ RRP  T S
Sbjct: 13  APAAAPPSAVRTPRRLRRRPLKTAS 37


>03_06_0090 +
           31570588-31570710,31570962-31571080,31572215-31572284,
           31572544-31573492,31574789-31575699
          Length = 723

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -3

Query: 290 VRVVSCGEGFVDLAEQFGGRRGCIQSPLEHIVPSSSRSLRGWP*NAA 150
           +R +   EG + LA+  G    C+ +       S+  +L GWP N A
Sbjct: 232 IRALRSCEGLLPLADDLGLVSRCVDAIAAKAAASTPTALFGWPINDA 278


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,141,609
Number of Sequences: 37544
Number of extensions: 422917
Number of successful extensions: 1868
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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