BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0544 (753 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_0260 + 14990324-14990916,14991055-14991245,14997427-149974... 30 2.3 07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 29 4.0 >08_02_0260 + 14990324-14990916,14991055-14991245,14997427-14997495, 14998134-14999221 Length = 646 Score = 29.9 bits (64), Expect = 2.3 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -2 Query: 542 NSTNSTASISYQIICIGVWCPHSFITS*FTPSNAESIHVLSPS 414 + +NST+ ++++++ IG WC S T PS +E I + S Sbjct: 585 DGSNSTSEVAHKLVIIGFWCIQSAPTD--RPSMSEVIDMFDRS 625 >07_03_0151 - 14465479-14465675,14466280-14466401,14466934-14467081, 14467146-14467167,14467299-14467393,14467395-14467438, 14467750-14467841,14467911-14467982,14468188-14468229, 14468333-14468494,14468631-14468683,14468808-14468925, 14468974-14469150,14469573-14469639,14470195-14470273, 14473805-14473862,14474257-14474346,14474429-14474540, 14474649-14474912,14475361-14475463,14476200-14476278, 14476748-14476852 Length = 766 Score = 29.1 bits (62), Expect = 4.0 Identities = 9/32 (28%), Positives = 21/32 (65%) Frame = +3 Query: 585 YPVKIHILPIVSPHDPCLQHAMPLYQKIIDQA 680 + ++ +LP+ + +PC++HA+ L Q ++ A Sbjct: 125 FHTELELLPVTALENPCIKHAVELEQSFMEGA 156 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,319,923 Number of Sequences: 37544 Number of extensions: 350148 Number of successful extensions: 791 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 791 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2004270760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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