BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0543 (723 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_1280 + 25846557-25846871,25847278-25847349,25847441-258475... 33 0.23 05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 31 0.93 04_04_1218 - 31822915-31823141,31823418-31823832,31824090-318244... 31 0.93 12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 30 2.1 12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 30 2.1 05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 30 2.1 05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 30 2.1 01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192... 30 2.1 01_06_0739 - 31601656-31602233,31602777-31602906 29 3.7 02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925,619... 29 4.9 >08_02_1280 + 25846557-25846871,25847278-25847349,25847441-25847599, 25847971-25848099,25848194-25848310,25848434-25848535, 25848759-25848917,25849090-25849464 Length = 475 Score = 33.1 bits (72), Expect = 0.23 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = +2 Query: 86 SSQTHKTESAQVPDRKENLVQKDTPKIRAGVKSATQEIPIK-EEIPSDTAKPNKETLKSL 262 S +T K++ + K N V + +I V A EI + E IP+ T PNK+ ++ L Sbjct: 116 SVETIKSQKHHLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYL 175 Query: 263 KKMVLQR 283 +++V+ + Sbjct: 176 RRLVIHK 182 >05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629, 18238033-18238041,18238096-18238248 Length = 1465 Score = 31.1 bits (67), Expect = 0.93 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +1 Query: 388 NSKLFPDQKLCLKIIPISHSSVVENLSSNEHNRRYIILYMLYDCSQF 528 N +FP +CL+I+ I+HS+V+E L + + ++ C F Sbjct: 1083 NLVVFPTNFICLRILVITHSNVLEGLPGGFGCQDTLTTLVILGCPSF 1129 >04_04_1218 - 31822915-31823141,31823418-31823832,31824090-31824440, 31825391-31825549,31825965-31826093,31826257-31826460, 31827200-31827412,31827547-31830912,31830999-31831150, 31831912-31832407,31832646-31833456,31833537-31834728, 31834856-31834922 Length = 2593 Score = 31.1 bits (67), Expect = 0.93 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = +2 Query: 77 EIKSSQTHKTESAQVPDRKENLVQKDTP 160 E +S THK E+A++ DR+ +L +++ P Sbjct: 1962 EFSASDTHKMENAEISDRRRSLFRENIP 1989 >12_02_0642 + 21454142-21454251,21454683-21454872,21454988-21455069, 21455224-21455802,21455854-21456909,21457133-21457251, 21457369-21457812 Length = 859 Score = 29.9 bits (64), Expect = 2.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 83 KSSQTHKTESAQVPDRKENLVQKDTPKIRAGVKSATQEIPIKEEIPSDTAK 235 K SQ H T A P +++ V K+R+ ++S + P+ E PS ++ Sbjct: 782 KESQQHTTPQAPAPAKRKRPVHTKKRKVRS-LQSLMRNAPVHPEAPSSDSE 831 >12_02_0639 + 21443480-21443589,21444022-21444211,21444327-21444408, 21444563-21445054,21445221-21446246,21446470-21446588, 21446706-21447149 Length = 820 Score = 29.9 bits (64), Expect = 2.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 83 KSSQTHKTESAQVPDRKENLVQKDTPKIRAGVKSATQEIPIKEEIPSDTAK 235 K SQ H T A P +++ V K+R+ ++S + P+ E PS ++ Sbjct: 743 KESQQHTTPQAPAPAKRKRPVHTKKRKVRS-LQSLMRNAPVHPEAPSSDSE 792 >05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631, 9415749-9416192 Length = 719 Score = 29.9 bits (64), Expect = 2.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 83 KSSQTHKTESAQVPDRKENLVQKDTPKIRAGVKSATQEIPIKEEIPSDTAK 235 K SQ H T A P +++ V K+R+ ++S + P+ E PS ++ Sbjct: 642 KESQQHTTPQAPAPAKRKRPVHAKKRKVRS-LQSLMRNAPVHPEAPSSDSE 691 >05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990, 7957103-7957559 Length = 946 Score = 29.9 bits (64), Expect = 2.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 83 KSSQTHKTESAQVPDRKENLVQKDTPKIRAGVKSATQEIPIKEEIPSDTAK 235 K SQ H T A P +++ V K+R+ ++S + P+ E PS ++ Sbjct: 873 KESQQHTTPQAPAPAKRKRPVHAKKRKVRS-LQSLMRNAPVHPEAPSSDSE 922 >01_06_0544 + 30118208-30118417,30118959-30119063,30119179-30119260, 30119415-30121250,30121327-30121445,30121563-30122006 Length = 931 Score = 29.9 bits (64), Expect = 2.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 83 KSSQTHKTESAQVPDRKENLVQKDTPKIRAGVKSATQEIPIKEEIPSDTAK 235 K SQ H T A P +++ V K+R+ ++S + P+ E PS ++ Sbjct: 854 KESQQHTTPQAPAPAKRKRPVHAKKRKVRS-LQSLMRNAPVHPEAPSSDSE 903 >01_06_0739 - 31601656-31602233,31602777-31602906 Length = 235 Score = 29.1 bits (62), Expect = 3.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 130 KRKSGSKRYSKNTGRCKICHTRN 198 +R+SG + S N GRCKI H ++ Sbjct: 40 RRRSGLQVASSNLGRCKIAHVKS 62 >02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925, 6198060-6198183,6198404-6198523,6198595-6198755, 6198999-6199157,6199272-6199434,6199604-6199729, 6199775-6199900,6200400-6200764,6201204-6201404, 6201685-6201794,6201919-6202003,6202553-6202681, 6202763-6202868,6202984-6203072,6203172-6203474 Length = 964 Score = 28.7 bits (61), Expect = 4.9 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 142 QIFFSVWYLGTFSFMCLRRLYFRLRSWLYIWSWFYFGA 29 +I + LG FS+ + YF L S LY+ S+ FG+ Sbjct: 379 RIMMKMHGLGDFSYWTISYCYFFLLSLLYVMSFTLFGS 416 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,617,962 Number of Sequences: 37544 Number of extensions: 314058 Number of successful extensions: 716 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 703 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 715 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1886372480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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