Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0543
         (723 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104942-1|AAI04943.1|  167|Homo sapiens chromosome 14 open read...    33   1.4  
BC104940-1|AAI04941.1|  167|Homo sapiens chromosome 14 open read...    33   1.4  
AK090706-1|BAC03507.1|  167|Homo sapiens protein ( Homo sapiens ...    33   1.4  
EF437223-1|ABO38126.1|  377|Homo sapiens sodium-dependent organi...    31   5.5  
BC107052-1|AAI07053.1|  377|Homo sapiens solute carrier family 1...    31   5.5  
BC107051-1|AAI07052.1|  377|Homo sapiens solute carrier family 1...    31   5.5  
AJ583502-1|CAE47477.1|  377|Homo sapiens sodium-dependent organi...    31   5.5  

>BC104942-1|AAI04943.1|  167|Homo sapiens chromosome 14 open reading
           frame 83 protein.
          Length = 167

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = -3

Query: 223 RWYLFFYRYFLCGRFYTCPYFWSIFLNQIF---FSVWYLGTF--SFMCLRRLYFRLR 68
           RWYL+    + C   +T  + + + LN  F    SVW L  +  S + + R+Y RLR
Sbjct: 12  RWYLYAIHGYFCEVMFTAAWEFVVNLNWKFPGVTSVWALFIYGTSILIVERMYLRLR 68


>BC104940-1|AAI04941.1|  167|Homo sapiens chromosome 14 open reading
           frame 83 protein.
          Length = 167

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = -3

Query: 223 RWYLFFYRYFLCGRFYTCPYFWSIFLNQIF---FSVWYLGTF--SFMCLRRLYFRLR 68
           RWYL+    + C   +T  + + + LN  F    SVW L  +  S + + R+Y RLR
Sbjct: 12  RWYLYAIHGYFCEVMFTAAWEFVVNLNWKFPGVTSVWALFIYGTSILIVERMYLRLR 68


>AK090706-1|BAC03507.1|  167|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33387 fis, clone BRACE2006636. ).
          Length = 167

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = -3

Query: 223 RWYLFFYRYFLCGRFYTCPYFWSIFLNQIF---FSVWYLGTF--SFMCLRRLYFRLR 68
           RWYL+    + C   +T  + + + LN  F    SVW L  +  S + + R+Y RLR
Sbjct: 12  RWYLYAIHGYFCEVMFTAAWEFVVNLNWKFPGVTSVWALFIYGTSILIVERMYLRLR 68


>EF437223-1|ABO38126.1|  377|Homo sapiens sodium-dependent organic
           anion transporter protein.
          Length = 377

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 130 KRKSGSKRYSKNTGRCKICHTRNTYKRRDT 219
           KR+  +K   KN+G  ++CHTR +   R+T
Sbjct: 312 KRRLKNKHGKKNSGCTEVCHTRKSTSSRET 341


>BC107052-1|AAI07053.1|  377|Homo sapiens solute carrier family 10
           (sodium/bile acid cotransporter family), member 6
           protein.
          Length = 377

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 130 KRKSGSKRYSKNTGRCKICHTRNTYKRRDT 219
           KR+  +K   KN+G  ++CHTR +   R+T
Sbjct: 312 KRRLKNKHGKKNSGCTEVCHTRKSTSSRET 341


>BC107051-1|AAI07052.1|  377|Homo sapiens solute carrier family 10
           (sodium/bile acid cotransporter family), member 6
           protein.
          Length = 377

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 130 KRKSGSKRYSKNTGRCKICHTRNTYKRRDT 219
           KR+  +K   KN+G  ++CHTR +   R+T
Sbjct: 312 KRRLKNKHGKKNSGCTEVCHTRKSTSSRET 341


>AJ583502-1|CAE47477.1|  377|Homo sapiens sodium-dependent organic
           anion transporter protein.
          Length = 377

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 130 KRKSGSKRYSKNTGRCKICHTRNTYKRRDT 219
           KR+  +K   KN+G  ++CHTR +   R+T
Sbjct: 312 KRRLKNKHGKKNSGCTEVCHTRKSTSSRET 341


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,669,435
Number of Sequences: 237096
Number of extensions: 2008528
Number of successful extensions: 3577
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3577
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)