Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0543
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    27   0.18 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   6.7  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   6.7  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   6.7  
AB248729-1|BAF02606.1|   43|Apis mellifera distal-less protein.        22   6.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 10/46 (21%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +2

Query: 137 NLVQ-KDTPKIRAGVKSATQEIPIKEEIPSDTAKPNKETLKSLKKM 271
           N+VQ ++TP++   + +    IP++ +  SD  + +   + + K +
Sbjct: 96  NIVQFRNTPEVHQAINTCQPSIPLEPDFTSDVTERDNHLVNAFKTL 141


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 181 FYTCPYFWSIFLNQIFFSVWY 119
           F TC + W+  +  IF  ++Y
Sbjct: 220 FVTCIFIWAYVIPLIFIILFY 240


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 497 YYTCFMIVHNLSDRN 541
           Y  CFM  H + D+N
Sbjct: 58  YLKCFMTKHGILDKN 72


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 181 FYTCPYFWSIFLNQIFFSVWY 119
           F TC + W+  +  IF  ++Y
Sbjct: 220 FVTCIFIWAYVIPLIFIILFY 240


>AB248729-1|BAF02606.1|   43|Apis mellifera distal-less protein.
          Length = 43

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 123 QTEKKIWFKKILQKY 167
           QT+ KIWF+    KY
Sbjct: 22  QTQVKIWFQNRRSKY 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,005
Number of Sequences: 438
Number of extensions: 4795
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)