Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0542
         (737 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0601 - 5268520-5271112,5272448-5272950                           33   0.31 
12_01_0399 + 3152219-3152721,3152995-3153127,3155013-3155097,315...    29   2.9  
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310...    29   2.9  
04_04_0369 - 24745140-24745510,24746005-24746089,24746746-247468...    29   3.9  
03_06_0748 - 35971065-35971268,35972022-35972597                       28   6.7  

>08_01_0601 - 5268520-5271112,5272448-5272950
          Length = 1031

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -1

Query: 581 TELGEKCSDLQREIRYLKALMRDLSRRRV*SSKS 480
           TE+G+K  +L+ E+ +L+  +RD  R+R  SS S
Sbjct: 25  TEVGKKVLELRHELEWLRTFLRDADRKRRGSSSS 58


>12_01_0399 +
           3152219-3152721,3152995-3153127,3155013-3155097,
           3155321-3155586
          Length = 328

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = -1

Query: 704 VDDRRSRKKEQNKNAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLKA 525
           +D +R+++   N+ +A R ++             QTL+   T L  + + LQR+   L A
Sbjct: 161 IDPKRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTA 220

Query: 524 LMRDLSRR 501
             R+L  R
Sbjct: 221 ENRELKLR 228


>03_02_0834 -
           11630288-11630500,11630531-11630623,11630844-11631050,
           11631301-11633089,11633817-11634145
          Length = 876

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = -1

Query: 602 QTLRQRHTELGEKCSDLQREIRYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAI 423
           Q LR+R  EL E+    QRE+  L++   D+S  ++ S +  N   + E+++  K H  +
Sbjct: 414 QRLRERVRELAEQNVSFQREVTLLESNRIDVS-NKITSLELQNKQLNDELQKVKKEHDTL 472


>04_04_0369 -
           24745140-24745510,24746005-24746089,24746746-24746878,
           24747764-24748584
          Length = 469

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 704 VDDRRSRKKEQNKNAATRYRQXXXXXXXXXXXXEQTLRQRHTELGEKCSDLQREIRYLKA 525
           VD +R+++   N+ +A R ++             QTL+   T L  + S LQR+   L +
Sbjct: 267 VDPKRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLSMLQRDTTGLTS 326

Query: 524 LMRDLSRR 501
              DL  R
Sbjct: 327 ENSDLKIR 334


>03_06_0748 - 35971065-35971268,35972022-35972597
          Length = 259

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -3

Query: 336 LHLSEQIRCHIIEQHKLRHHQRDTNNTCKVAPFFIIHSFINSLI 205
           L LS Q+R    E H+  H+  D+N TC V P     SF N+L+
Sbjct: 62  LRLSPQLRWE--EAHEPLHNGIDSNRTCGVGPGM---SFANALL 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,935,552
Number of Sequences: 37544
Number of extensions: 272022
Number of successful extensions: 547
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)