BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0542 (737 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 23 2.3 AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.3 AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 3.0 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 3.0 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 3.0 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 3.0 AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 23 4.0 DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 5.2 AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.2 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.2 DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 9.1 >DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. Length = 132 Score = 23.4 bits (48), Expect = 2.3 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -1 Query: 557 DLQREIRYLKALMRDLSRRRV*SSKSINN 471 D+Q+ +R+L M+D +++ KSI N Sbjct: 76 DVQKALRHLPRSMQDSTKKLFNKCKSIQN 104 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.4 bits (48), Expect = 2.3 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Frame = -1 Query: 575 LGEKCSDLQR----EIRYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAIDSVDH 408 LG + QR RY + D + R +S + SRE K+ + + + +V+ Sbjct: 217 LGSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEE 276 Query: 407 RKLRE 393 + LRE Sbjct: 277 KHLRE 281 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 3.0 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = -1 Query: 539 RYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAIDSVDHRKLRE 393 RY + D + R +S + SRE K+ + + + +V+ + LRE Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 3.0 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = -1 Query: 539 RYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAIDSVDHRKLRE 393 RY + D + R +S + SRE K+ + + + +V+ + LRE Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 3.0 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = -1 Query: 539 RYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAIDSVDHRKLRE 393 RY + D + R +S + SRE K+ + + + +V+ + LRE Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 23.0 bits (47), Expect = 3.0 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = -1 Query: 539 RYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAIDSVDHRKLRE 393 RY + D + R +S + SRE K+ + + + +V+ + LRE Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281 >AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier protein JHBP-1 protein. Length = 253 Score = 22.6 bits (46), Expect = 4.0 Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%) Frame = +2 Query: 14 SHS-IYCKKY*KNNQRF 61 SH+ IYC+KY KN + + Sbjct: 157 SHNDIYCEKYEKNGETY 173 >DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex determiner protein. Length = 152 Score = 22.2 bits (45), Expect = 5.2 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = -1 Query: 485 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 393 KS + SRE K+ + + + +V+ + LRE Sbjct: 2 KSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32 >AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 5.2 Identities = 13/49 (26%), Positives = 23/49 (46%) Frame = -1 Query: 539 RYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAIDSVDHRKLRE 393 RY D + R +S + SRE K+ + + + +V+ + LRE Sbjct: 233 RYEDLRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 5.2 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = -1 Query: 539 RYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAIDSVDHRKLRE 393 RY + D + R +S + SRE K+ + + + +V+ + LRE Sbjct: 233 RYEDSRHEDGNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 281 >DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. Length = 145 Score = 21.4 bits (43), Expect = 9.1 Identities = 10/36 (27%), Positives = 16/36 (44%) Frame = +3 Query: 6 FRHRIPFIVRNIKKIIKDFMSVDKISQYKYVYIYRK 113 F RIP ++K I + + K +Y Y + K Sbjct: 97 FFQRIPAYRAEVQKAISECKGIAKGDNCEYAYRFNK 132 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 174,721 Number of Sequences: 438 Number of extensions: 3748 Number of successful extensions: 20 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23023035 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -