Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0542
         (737 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g07678.1 68415.m00915 hypothetical protein                          34   0.11 
At4g02710.1 68417.m00366 kinase interacting family protein simil...    29   4.3  
At5g23980.1 68418.m02818 ferric-chelate reductase, putative simi...    28   7.4  

>At2g07678.1 68415.m00915 hypothetical protein
          Length = 245

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 309 HIIEQHKLRHHQRDTNNTCKVAPFFIIHSFINSL 208
           HI+ + KLRH    TN+T KV    I+HS+I +L
Sbjct: 22  HILTREKLRHQTSGTNSTEKVILPNILHSYIKNL 55


>At4g02710.1 68417.m00366 kinase interacting family protein similar
           to kinase interacting protein 1 (GI:13936326) [Petunia
           integrifolia]
          Length = 1111

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/64 (25%), Positives = 35/64 (54%)
 Frame = -1

Query: 602 QTLRQRHTELGEKCSDLQREIRYLKALMRDLSRRRV*SSKSINNAASREIKQYAKTHKAI 423
           QTL+Q H++  E+ ++L  E++ +  +M+D+  R        NN    E++Q    +K +
Sbjct: 499 QTLQQLHSQSQEELNNLAVELQTVSQIMKDMEMR--------NNELHEELEQAKVENKGL 550

Query: 422 DSVD 411
           + ++
Sbjct: 551 NDLN 554


>At5g23980.1 68418.m02818 ferric-chelate reductase, putative similar
           to ferric-chelate reductase (FRO1) [Pisum sativum]
           GI:15341529; contains Pfam profile PF01794: Ferric
           reductase like transmembrane component
          Length = 699

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -2

Query: 175 VKICILIGSTTSYSLFWLNHYFRYIYTYLY*EILSTDMKSLIIFLIFLTINGMRWRKK 2
           V   +LIG  T Y ++ ++H    IY + Y  +    + S  IF+    +    WRKK
Sbjct: 538 VMFLLLIGIVTRYYIYPVDHNTGSIYNFSYRGLWDMFLGSACIFISSSVV--FLWRKK 593


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,084,490
Number of Sequences: 28952
Number of extensions: 231316
Number of successful extensions: 444
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)