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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0540
         (470 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    30   0.15 
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc...    29   0.27 
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce...    29   0.27 
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po...    28   0.83 
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M...    27   1.1  
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-...    27   1.1  
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb...    27   1.1  
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces...    27   1.9  
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos...    27   1.9  
SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces pombe...    26   2.5  
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb...    26   2.5  
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei...    26   3.3  
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo...    26   3.3  
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p...    25   4.4  
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch...    25   4.4  
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    25   4.4  
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc...    25   4.4  
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa...    25   5.8  
SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyce...    25   5.8  
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo...    25   5.8  
SPAC637.11 |suv3||ATP-dependent RNA helicase Suv3|Schizosaccharo...    25   5.8  
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p...    25   5.8  
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch...    25   5.8  
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa...    25   5.8  
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc...    25   7.7  
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ...    25   7.7  

>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 412

 Score = 30.3 bits (65), Expect = 0.15
 Identities = 24/71 (33%), Positives = 38/71 (53%)
 Frame = +1

Query: 85  LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSS 264
           L +   V R    F + +EH+     K+LE+Q + L +SKDA     A  + S S L+S+
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDASSNLTAC-NRSGSSLSSN 250

Query: 265 TPSPRVSRERS 297
             S R+S++ S
Sbjct: 251 FYSSRLSKKTS 261


>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 393

 Score = 29.5 bits (63), Expect = 0.27
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +3

Query: 306 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQES 458
           NG A+E     R  +    EELRKA  D+E+   DL +K+ A   + V E+
Sbjct: 66  NGNAEEIFANKRLRV--CVEELRKARLDLEEENDDL-DKIGALKLHVVSEN 113


>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 238

 Score = 29.5 bits (63), Expect = 0.27
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +3

Query: 264 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATDLREKLQAA 434
           N + + L   + +A  KA+++LEQ+    +   E L K H +    E+     +EKL A 
Sbjct: 43  NEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAM 101

Query: 435 VQNTVQESQKL 467
           ++   + S++L
Sbjct: 102 LKRKQKLSEEL 112


>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 670

 Score = 27.9 bits (59), Expect = 0.83
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = +3

Query: 279 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATDLREKLQAA 434
           S++  L + N + KE +E     +      RT +E        EKN  +LRE+L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576


>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 307

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 172 EQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPS 273
           ++Q NS+T+ +   D +K+W     + LN S  S
Sbjct: 84  QKQINSITQMRTKFDKTKSWLSSKRNTLNKSKES 117


>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
           cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 463

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +1

Query: 130 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPS---PRVSRERSE 300
           KD+   +   H T       LT +K + D      D  ++ LNSS+ S     +SR +SE
Sbjct: 246 KDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSE 305

Query: 301 TR 306
            R
Sbjct: 306 LR 307


>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 631

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 342 ASTVPKPPWPCRSRLRALPG 283
           AST+ K PWP  + L  +PG
Sbjct: 38  ASTLEKEPWPASTALLVMPG 57


>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1485

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +1

Query: 112 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 231
           D   +F D++ H K FH   E+  +   +  +K   D  K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706


>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
           Plc1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 899

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 106 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 195
           ++   DFFK +    ++ H TL ++ NSL+
Sbjct: 56  KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85


>SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 229

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +3

Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQESQKLV 470
           D   + +E  E S++  E   E+ RKA  D  +N  D R+K+   +  + +E +KL+
Sbjct: 115 DQMKRIQERDESSKKLRESNIEKARKAIDDFYENFNDKRDKV---IAKSRKEQEKLL 168


>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 175

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 327 LEQSRQNIERTAEELRKAHPDVEK 398
           +EQ+R   E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149


>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1462

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 371 ELLGRALDVLPRLFQSLLGLAVRVSERSLETLGEGVELLSTDSEPSFQALL 219
           ELL     +LP +  +LL L   +S  +++ + E   +L ++ +P  + +L
Sbjct: 318 ELLSVLKTLLPGILLALLSLRTTLSSSAIQLIKEMAIILKSNIDPFLELIL 368


>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
           Swr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1288

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQESQ 461
           KAKE  ++ R   +RTA E+RK    +E+     R +  A  Q    + Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213


>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 394

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 76  CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 252
           C  + +G  +RR  P +++ I      ++ KTL + FN+  + +++  + KA ++G   V
Sbjct: 13  CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72

Query: 253 LN 258
            N
Sbjct: 73  NN 74


>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
           Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1108

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 306 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 401
           N K KE  E++     +  EELR+A PD E++
Sbjct: 22  NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53


>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 419

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 14/68 (20%), Positives = 31/68 (45%)
 Frame = +3

Query: 264 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQN 443
           N  + ++  AL +   KA + LE+  ++ E + EE+   H    +  T  +   +   + 
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396

Query: 444 TVQESQKL 467
            +QE  ++
Sbjct: 397 IIQEKSRV 404


>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
           Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1062

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +1

Query: 133 DIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPSPRVSR 288
           D ++   EF  TL+   + L KS+   DF   +K  + S  +S T SP  SR
Sbjct: 325 DHDNWDNEFQGTLKISDDVLKKSEHFMDFCSNFKGKNNS--SSITSSPSKSR 374


>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 548

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 369 LRKAHPDVEKNATDLREKLQAAVQNTVQE 455
           L  AH D+E   T +RE+L++ +    +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295


>SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 610

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +1

Query: 94  GAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDF---SKAWKDGSESVLNSS 264
           G+MV   +  ++  I+   K  ++ L    ++LT  ++++DF   S+     +E++ N  
Sbjct: 438 GSMVLNPSSRYYSRIKDAMKALYEDLLYDEDALTLERNSRDFAERSQVINHNAETICNLL 497

Query: 265 TPSPRV 282
             +P++
Sbjct: 498 YQNPKI 503


>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
           transporter Bfr1|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1530

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 421 FSRRSVAFFSTSGWALRSSSAVRSMF 344
           FSR  V FFS    AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595


>SPAC637.11 |suv3||ATP-dependent RNA helicase
           Suv3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 647

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQ 428
           K  + L    +   R  E + +  PD++K  TDL+  ++
Sbjct: 124 KIHDCLLSEYRKYVRYQERIEETRPDLQKQLTDLKNPIE 162


>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 521

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 297 GDANGKAKEALEQSRQNIERTAEE 368
           G  NG+AKE  E+ R   ++T E+
Sbjct: 473 GKGNGRAKETPEEKRARKKKTKED 496


>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 803

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 300 DANGKAKEALEQSRQNIERTAEE 368
           D+  KAK  LEQ+R  +ERT  E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425


>SPBC27B12.12c |||CorA family magnesium ion transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 803

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 348 CSASTVPKPPWPCRSRLRALPGDS 277
           C  +T+PKPP+   + L  LP  S
Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKS 313


>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
           Bms1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1121

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
 Frame = +1

Query: 73  ACIALAQGAMVRRDAPDFFKDIEHHTKEFH-----KTLEQQFNSLTKSKDAQDFSKAWKD 237
           A +A +Q    RR+    F D     K+ +     ++ +   + L  S D +DF K  K 
Sbjct: 499 AALAYSQSGKRRRNIQKIFYDESLSPKDAYAEYKGESAKSSESDLVVSDDEEDFFKVSKV 558

Query: 238 GSESVLNSSTPSPRVSRERSETRTARPRRL 327
            +ES+ ++         +R   +   P+ L
Sbjct: 559 ANESISSNHEKLMESESDRLSKKWENPQLL 588


>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 878

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 179 SLTRSPSQRTHRTSARLGRTAPSPCS 256
           S+T +PS+ TH  + R+ RT+   CS
Sbjct: 689 SITSNPSKCTHLIAPRILRTSKFLCS 714


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,519,892
Number of Sequences: 5004
Number of extensions: 26575
Number of successful extensions: 252
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 180421690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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