Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0540
(470 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.15
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.27
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.27
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 28 0.83
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 27 1.1
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 1.1
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 1.1
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 1.9
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 1.9
SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces pombe... 26 2.5
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 2.5
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 26 3.3
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 3.3
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 25 4.4
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 4.4
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 4.4
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 25 4.4
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 5.8
SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyce... 25 5.8
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 5.8
SPAC637.11 |suv3||ATP-dependent RNA helicase Suv3|Schizosaccharo... 25 5.8
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 5.8
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 5.8
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 5.8
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 7.7
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 25 7.7
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 30.3 bits (65), Expect = 0.15
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 85 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSS 264
L + V R F + +EH+ K+LE+Q + L +SKDA A + S S L+S+
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDASSNLTAC-NRSGSSLSSN 250
Query: 265 TPSPRVSRERS 297
S R+S++ S
Sbjct: 251 FYSSRLSKKTS 261
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 29.5 bits (63), Expect = 0.27
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 306 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQES 458
NG A+E R + EELRKA D+E+ DL +K+ A + V E+
Sbjct: 66 NGNAEEIFANKRLRV--CVEELRKARLDLEEENDDL-DKIGALKLHVVSEN 113
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.5 bits (63), Expect = 0.27
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 264 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATDLREKLQAA 434
N + + L + +A KA+++LEQ+ + E L K H + E+ +EKL A
Sbjct: 43 NEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAM 101
Query: 435 VQNTVQESQKL 467
++ + S++L
Sbjct: 102 LKRKQKLSEEL 112
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 0.83
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 279 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATDLREKLQAA 434
S++ L + N + KE +E + RT +E EKN +LRE+L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 27.5 bits (58), Expect = 1.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 172 EQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPS 273
++Q NS+T+ + D +K+W + LN S S
Sbjct: 84 QKQINSITQMRTKFDKTKSWLSSKRNTLNKSKES 117
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 27.5 bits (58), Expect = 1.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 130 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPS---PRVSRERSE 300
KD+ + H T LT +K + D D ++ LNSS+ S +SR +SE
Sbjct: 246 KDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSE 305
Query: 301 TR 306
R
Sbjct: 306 LR 307
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 1.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 342 ASTVPKPPWPCRSRLRALPG 283
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 1.9
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 112 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 231
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 1.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 106 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 195
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 26.2 bits (55), Expect = 2.5
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQESQKLV 470
D + +E E S++ E E+ RKA D +N D R+K+ + + +E +KL+
Sbjct: 115 DQMKRIQERDESSKKLRESNIEKARKAIDDFYENFNDKRDKV---IAKSRKEQEKLL 168
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 2.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 327 LEQSRQNIERTAEELRKAHPDVEK 398
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 25.8 bits (54), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -1
Query: 371 ELLGRALDVLPRLFQSLLGLAVRVSERSLETLGEGVELLSTDSEPSFQALL 219
ELL +LP + +LL L +S +++ + E +L ++ +P + +L
Sbjct: 318 ELLSVLKTLLPGILLALLSLRTTLSSSAIQLIKEMAIILKSNIDPFLELIL 368
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 25.8 bits (54), Expect = 3.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQESQ 461
KAKE ++ R +RTA E+RK +E+ R + A Q + Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.4 bits (53), Expect = 4.4
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 76 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 252
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 253 LN 258
N
Sbjct: 73 NN 74
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 306 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 401
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 25.4 bits (53), Expect = 4.4
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +3
Query: 264 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQN 443
N + ++ AL + KA + LE+ ++ E + EE+ H + T + + +
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 444 TVQESQKL 467
+QE ++
Sbjct: 397 IIQEKSRV 404
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 25.4 bits (53), Expect = 4.4
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 133 DIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPSPRVSR 288
D ++ EF TL+ + L KS+ DF +K + S +S T SP SR
Sbjct: 325 DHDNWDNEFQGTLKISDDVLKKSEHFMDFCSNFKGKNNS--SSITSSPSKSR 374
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 5.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 369 LRKAHPDVEKNATDLREKLQAAVQNTVQE 455
L AH D+E T +RE+L++ + +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 610
Score = 25.0 bits (52), Expect = 5.8
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 94 GAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDF---SKAWKDGSESVLNSS 264
G+MV + ++ I+ K ++ L ++LT ++++DF S+ +E++ N
Sbjct: 438 GSMVLNPSSRYYSRIKDAMKALYEDLLYDEDALTLERNSRDFAERSQVINHNAETICNLL 497
Query: 265 TPSPRV 282
+P++
Sbjct: 498 YQNPKI 503
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 5.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 421 FSRRSVAFFSTSGWALRSSSAVRSMF 344
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPAC637.11 |suv3||ATP-dependent RNA helicase
Suv3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 5.8
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQ 428
K + L + R E + + PD++K TDL+ ++
Sbjct: 124 KIHDCLLSEYRKYVRYQERIEETRPDLQKQLTDLKNPIE 162
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 5.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 297 GDANGKAKEALEQSRQNIERTAEE 368
G NG+AKE E+ R ++T E+
Sbjct: 473 GKGNGRAKETPEEKRARKKKTKED 496
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 5.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEE 368
D+ KAK LEQ+R +ERT E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 5.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 348 CSASTVPKPPWPCRSRLRALPGDS 277
C +T+PKPP+ + L LP S
Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKS 313
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 24.6 bits (51), Expect = 7.7
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +1
Query: 73 ACIALAQGAMVRRDAPDFFKDIEHHTKEFH-----KTLEQQFNSLTKSKDAQDFSKAWKD 237
A +A +Q RR+ F D K+ + ++ + + L S D +DF K K
Sbjct: 499 AALAYSQSGKRRRNIQKIFYDESLSPKDAYAEYKGESAKSSESDLVVSDDEEDFFKVSKV 558
Query: 238 GSESVLNSSTPSPRVSRERSETRTARPRRL 327
+ES+ ++ +R + P+ L
Sbjct: 559 ANESISSNHEKLMESESDRLSKKWENPQLL 588
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 24.6 bits (51), Expect = 7.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 179 SLTRSPSQRTHRTSARLGRTAPSPCS 256
S+T +PS+ TH + R+ RT+ CS
Sbjct: 689 SITSNPSKCTHLIAPRILRTSKFLCS 714
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,519,892
Number of Sequences: 5004
Number of extensions: 26575
Number of successful extensions: 252
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 180421690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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