BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0540 (470 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.15 SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.27 SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.27 SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 28 0.83 SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 27 1.1 SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 1.1 SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 1.1 SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 1.9 SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 1.9 SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces pombe... 26 2.5 SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 2.5 SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 26 3.3 SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 3.3 SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 25 4.4 SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 4.4 SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 4.4 SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 25 4.4 SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 5.8 SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyce... 25 5.8 SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 5.8 SPAC637.11 |suv3||ATP-dependent RNA helicase Suv3|Schizosaccharo... 25 5.8 SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 5.8 SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 5.8 SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 5.8 SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 7.7 SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 25 7.7 >SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 412 Score = 30.3 bits (65), Expect = 0.15 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = +1 Query: 85 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSS 264 L + V R F + +EH+ K+LE+Q + L +SKDA A + S S L+S+ Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDASSNLTAC-NRSGSSLSSN 250 Query: 265 TPSPRVSRERS 297 S R+S++ S Sbjct: 251 FYSSRLSKKTS 261 >SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosaccharomyces pombe|chr 1|||Manual Length = 393 Score = 29.5 bits (63), Expect = 0.27 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +3 Query: 306 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQES 458 NG A+E R + EELRKA D+E+ DL +K+ A + V E+ Sbjct: 66 NGNAEEIFANKRLRV--CVEELRKARLDLEEENDDL-DKIGALKLHVVSEN 113 >SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces pombe|chr 3|||Manual Length = 238 Score = 29.5 bits (63), Expect = 0.27 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +3 Query: 264 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATDLREKLQAA 434 N + + L + +A KA+++LEQ+ + E L K H + E+ +EKL A Sbjct: 43 NEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAM 101 Query: 435 VQNTVQESQKL 467 ++ + S++L Sbjct: 102 LKRKQKLSEEL 112 >SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 27.9 bits (59), Expect = 0.83 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = +3 Query: 279 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATDLREKLQAA 434 S++ L + N + KE +E + RT +E EKN +LRE+L+ A Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576 >SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||Manual Length = 307 Score = 27.5 bits (58), Expect = 1.1 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +1 Query: 172 EQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPS 273 ++Q NS+T+ + D +K+W + LN S S Sbjct: 84 QKQINSITQMRTKFDKTKSWLSSKRNTLNKSKES 117 >SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr 2|||Manual Length = 463 Score = 27.5 bits (58), Expect = 1.1 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = +1 Query: 130 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPS---PRVSRERSE 300 KD+ + H T LT +K + D D ++ LNSS+ S +SR +SE Sbjct: 246 KDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSE 305 Query: 301 TR 306 R Sbjct: 306 LR 307 >SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pombe|chr 2|||Manual Length = 631 Score = 27.5 bits (58), Expect = 1.1 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -3 Query: 342 ASTVPKPPWPCRSRLRALPG 283 AST+ K PWP + L +PG Sbjct: 38 ASTLEKEPWPASTALLVMPG 57 >SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces pombe|chr 2|||Manual Length = 1485 Score = 26.6 bits (56), Expect = 1.9 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = +1 Query: 112 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 231 D +F D++ H K FH E+ + + +K D K W Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706 >SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizosaccharomyces pombe|chr 1|||Manual Length = 899 Score = 26.6 bits (56), Expect = 1.9 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = +1 Query: 106 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 195 ++ DFFK + ++ H TL ++ NSL+ Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85 >SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces pombe|chr 2|||Manual Length = 229 Score = 26.2 bits (55), Expect = 2.5 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = +3 Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQESQKLV 470 D + +E E S++ E E+ RKA D +N D R+K+ + + +E +KL+ Sbjct: 115 DQMKRIQERDESSKKLRESNIEKARKAIDDFYENFNDKRDKV---IAKSRKEQEKLL 168 >SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pombe|chr 2|||Manual Length = 175 Score = 26.2 bits (55), Expect = 2.5 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = +3 Query: 327 LEQSRQNIERTAEELRKAHPDVEK 398 +EQ+R E T E++++A P++EK Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149 >SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1462 Score = 25.8 bits (54), Expect = 3.3 Identities = 13/51 (25%), Positives = 27/51 (52%) Frame = -1 Query: 371 ELLGRALDVLPRLFQSLLGLAVRVSERSLETLGEGVELLSTDSEPSFQALL 219 ELL +LP + +LL L +S +++ + E +L ++ +P + +L Sbjct: 318 ELLSVLKTLLPGILLALLSLRTTLSSSAIQLIKEMAIILKSNIDPFLELIL 368 >SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1288 Score = 25.8 bits (54), Expect = 3.3 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQESQ 461 KAKE ++ R +RTA E+RK +E+ R + A Q + Q Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213 >SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces pombe|chr 1|||Manual Length = 394 Score = 25.4 bits (53), Expect = 4.4 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = +1 Query: 76 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 252 C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72 Query: 253 LN 258 N Sbjct: 73 NN 74 >SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Schizosaccharomyces pombe|chr 3|||Manual Length = 1108 Score = 25.4 bits (53), Expect = 4.4 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 306 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 401 N K KE E++ + EELR+A PD E++ Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53 >SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 419 Score = 25.4 bits (53), Expect = 4.4 Identities = 14/68 (20%), Positives = 31/68 (45%) Frame = +3 Query: 264 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQN 443 N + ++ AL + KA + LE+ ++ E + EE+ H + T + + + Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396 Query: 444 TVQESQKL 467 +QE ++ Sbjct: 397 IIQEKSRV 404 >SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc7|Schizosaccharomyces pombe|chr 2|||Manual Length = 1062 Score = 25.4 bits (53), Expect = 4.4 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +1 Query: 133 DIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPSPRVSR 288 D ++ EF TL+ + L KS+ DF +K + S +S T SP SR Sbjct: 325 DHDNWDNEFQGTLKISDDVLKKSEHFMDFCSNFKGKNNS--SSITSSPSKSR 374 >SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosaccharomyces pombe|chr 2|||Manual Length = 548 Score = 25.0 bits (52), Expect = 5.8 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +3 Query: 369 LRKAHPDVEKNATDLREKLQAAVQNTVQE 455 L AH D+E T +RE+L++ + +E Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295 >SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyces pombe|chr 2|||Manual Length = 610 Score = 25.0 bits (52), Expect = 5.8 Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = +1 Query: 94 GAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDF---SKAWKDGSESVLNSS 264 G+MV + ++ I+ K ++ L ++LT ++++DF S+ +E++ N Sbjct: 438 GSMVLNPSSRYYSRIKDAMKALYEDLLYDEDALTLERNSRDFAERSQVINHNAETICNLL 497 Query: 265 TPSPRV 282 +P++ Sbjct: 498 YQNPKI 503 >SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter Bfr1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1530 Score = 25.0 bits (52), Expect = 5.8 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -2 Query: 421 FSRRSVAFFSTSGWALRSSSAVRSMF 344 FSR V FFS AL+S S + +MF Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595 >SPAC637.11 |suv3||ATP-dependent RNA helicase Suv3|Schizosaccharomyces pombe|chr 1|||Manual Length = 647 Score = 25.0 bits (52), Expect = 5.8 Identities = 10/39 (25%), Positives = 19/39 (48%) Frame = +3 Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQ 428 K + L + R E + + PD++K TDL+ ++ Sbjct: 124 KIHDCLLSEYRKYVRYQERIEETRPDLQKQLTDLKNPIE 162 >SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces pombe|chr 1|||Manual Length = 521 Score = 25.0 bits (52), Expect = 5.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 297 GDANGKAKEALEQSRQNIERTAEE 368 G NG+AKE E+ R ++T E+ Sbjct: 473 GKGNGRAKETPEEKRARKKKTKED 496 >SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosaccharomyces pombe|chr 2|||Manual Length = 803 Score = 25.0 bits (52), Expect = 5.8 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 300 DANGKAKEALEQSRQNIERTAEE 368 D+ KAK LEQ+R +ERT E Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425 >SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosaccharomyces pombe|chr 2|||Manual Length = 803 Score = 25.0 bits (52), Expect = 5.8 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 Query: 348 CSASTVPKPPWPCRSRLRALPGDS 277 C +T+PKPP+ + L LP S Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKS 313 >SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1121 Score = 24.6 bits (51), Expect = 7.7 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 5/90 (5%) Frame = +1 Query: 73 ACIALAQGAMVRRDAPDFFKDIEHHTKEFH-----KTLEQQFNSLTKSKDAQDFSKAWKD 237 A +A +Q RR+ F D K+ + ++ + + L S D +DF K K Sbjct: 499 AALAYSQSGKRRRNIQKIFYDESLSPKDAYAEYKGESAKSSESDLVVSDDEEDFFKVSKV 558 Query: 238 GSESVLNSSTPSPRVSRERSETRTARPRRL 327 +ES+ ++ +R + P+ L Sbjct: 559 ANESISSNHEKLMESESDRLSKKWENPQLL 588 >SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 878 Score = 24.6 bits (51), Expect = 7.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 179 SLTRSPSQRTHRTSARLGRTAPSPCS 256 S+T +PS+ TH + R+ RT+ CS Sbjct: 689 SITSNPSKCTHLIAPRILRTSKFLCS 714 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,519,892 Number of Sequences: 5004 Number of extensions: 26575 Number of successful extensions: 252 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 231 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 180421690 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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