Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0540
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0180 + 2034021-2034023,2034741-2035088 33 0.088
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 31 0.35
03_02_0574 + 9575496-9575517,9575636-9576418,9576754-9577163,957... 31 0.62
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 30 0.82
07_01_0720 + 5512638-5513141,5513588-5514607 30 0.82
10_08_0339 + 16922509-16923876,16923941-16924384,16924469-169246... 30 1.1
02_04_0436 - 22920106-22920348,22920569-22920884,22929569-229300... 30 1.1
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 29 1.4
03_06_0141 - 31955782-31956801 29 1.4
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 29 1.4
02_04_0315 - 21969416-21970756 29 1.4
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 29 1.4
01_06_1268 - 35878520-35879353,35879920-35880332,35881109-358815... 29 1.4
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 29 1.9
01_05_0249 - 19903154-19903454,19904114-19904168,19904707-199047... 29 2.5
01_01_0863 - 6724200-6724414,6726300-6726576,6726976-6727145,672... 29 2.5
02_01_0305 + 2041370-2043114,2043764-2044121 28 3.3
03_05_0373 + 23581812-23583293 28 4.4
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 28 4.4
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 27 5.8
03_06_0040 + 31240164-31241102,31241280-31241897 27 5.8
08_02_1308 - 26024491-26025405 27 7.6
06_03_0608 + 22705321-22705652,22705809-22706178,22706264-227066... 27 7.6
05_07_0352 - 29475855-29476330,29476421-29477165,29477689-294780... 27 7.6
04_01_0290 + 3843610-3843712,3844088-3846003 27 7.6
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 33.5 bits (73), Expect = 0.088
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = +3
Query: 135 HRTPHQGVP*DFRTTV*LAHQVKGRTGLQQGLEGRLRVRAQQLNAFAKSLQGALGDANGK 314
HR +G D T V +GL GR+ +LN K L +
Sbjct: 2 HRATRRGYTGDPPTKVLERENADAHKDQVKGLNGRI----SKLNDTIKELNDTI------ 51
Query: 315 AKEALEQSRQNIERTAEELRKAHPDVEKNATDLREK---LQAAVQN 443
EALE+ QN+ R EE +K H +++K +L K L AA +N
Sbjct: 52 --EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 31.5 bits (68), Expect = 0.35
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +3
Query: 291 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQESQKL 467
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A ++ ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSL 573
>03_02_0574 +
9575496-9575517,9575636-9576418,9576754-9577163,
9577246-9578079
Length = 682
Score = 30.7 bits (66), Expect = 0.62
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 246 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNATD 410
VRA LN L+ + + LEQ+R+ N+ A+ELRK H + NAT+
Sbjct: 454 VRANDLNQPRDELRKTVTEIKKDVHTQLEQARKTNKNVSGIAKELRKLHREGINNATN 511
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 30.3 bits (65), Expect = 0.82
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +3
Query: 195 QVKGRTGLQQGLEGRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELR 374
Q+K + + + G L V+ Q+ + L+ A+ A KA A + +++ + E +
Sbjct: 414 QLKQKDTETESIVGDLHVKLQKCKS---ELEAAVA-AESKATSASDDLMLALQQLSSESK 469
Query: 375 KAHPDVE---KNATDLREKLQAAVQNTVQESQKL 467
A + E K+A DLR++ +AA + QKL
Sbjct: 470 NALQEAEVMQKSAADLRDEAEAARVALAEAEQKL 503
>07_01_0720 + 5512638-5513141,5513588-5514607
Length = 507
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 206 THRTSARLGRTAPSPCSTAQRLR 274
T R +ARLG T P+P S++ RLR
Sbjct: 59 TPRNAARLGATPPAPLSSSSRLR 81
>10_08_0339 +
16922509-16923876,16923941-16924384,16924469-16924655,
16924750-16925702
Length = 983
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 246 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDV 392
+R NAF K L+ +GD +G+ L Q ++ E A R++ V
Sbjct: 446 IRCSMKNAFTKILESGMGDGDGEPGVVLTQLARDTEELAVVERRSFSPV 494
>02_04_0436 -
22920106-22920348,22920569-22920884,22929569-22930027,
22930187-22930401,22930741-22930803,22930814-22930830,
22931141-22931389,22931546-22931774,22932427-22932534,
22932954-22933094,22933669-22933729,22933974-22934095,
22934533-22934760,22934857-22935000
Length = 864
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -3
Query: 357 CARCSASTVPKPPWP-CRSRLRAL---PGDSWRRR*AVEHGLGAVLPSLAEVL 211
C R S VP+ R+ +RAL PGD+ RR V HG G + PS A L
Sbjct: 598 CFRVSGHGVPRELQAGMRAAVRALFDLPGDAKRRNADVIHGSGYMAPSAANPL 650
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 297 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVE-KNATDLREKLQAA-VQNTVQESQKL 467
GD++G AKE L + SR ++ E RK +E K LR + Q +Q+ ++ +Q++
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQV 179
Query: 468 V 470
+
Sbjct: 180 L 180
>03_06_0141 - 31955782-31956801
Length = 339
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 354 ARCSASTVPKPPWPCRSRLRALPGDSWRRR*AVE 253
ARC A+TV C++ R + GD +RRR A++
Sbjct: 57 ARCDAATVLSLAATCKALRRIILGDDFRRRLALQ 90
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQAAVQNTVQESQKL 467
DA G+ EA+E + E+L A+PDV+ L E L+ A + ++++ L
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSL 692
>02_04_0315 - 21969416-21970756
Length = 446
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +3
Query: 252 AQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATDLREKLQA 431
A Q N L + D NG + ALE++ + + E L A + K + EK ++
Sbjct: 230 AGQENVELAELHRVVDDENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ES 288
Query: 432 AVQNTVQESQKL 467
A++ QE++ L
Sbjct: 289 AMEALRQENESL 300
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 318 KEALEQSRQNIERTAEELR-KAHPDVEKNATDLREKLQAAVQNTVQESQ 461
K+ +QS ERT E + KAH ++ K E +QAA +QE Q
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQ 464
>01_06_1268 -
35878520-35879353,35879920-35880332,35881109-35881510,
35881598-35881619
Length = 556
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 246 VRAQQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNATD 410
+R+++LN L+ + + LEQ+R+ N+ A+ELRK H + NAT+
Sbjct: 328 LRSRELNQPRDELRKTVTEIKKDVHTQLEQTRKTNKNVHGIAKELRKLHREGINNATN 385
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/80 (22%), Positives = 36/80 (45%)
Frame = +3
Query: 225 GLEGRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 404
G + L R ++LN SL+ + D + K +++ + EEL K + K
Sbjct: 1416 GCQSELDAREKKLNDVEASLKSEI-DRHRKININIKRKLDASAKEKEELTKEKQSLSKQL 1474
Query: 405 TDLREKLQAAVQNTVQESQK 464
DL+ + +N+ +++ K
Sbjct: 1475 EDLKSSQKTTTENSNEQAIK 1494
>01_05_0249 -
19903154-19903454,19904114-19904168,19904707-19904791,
19905140-19905511
Length = 270
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 270 FAKSLQGALG--DANGKAKEALEQSRQNIERTAEELRKAHPDV 392
F KSL G + D +GKAK+ + + + + +EE++ + DV
Sbjct: 184 FEKSLVGQINIEDMSGKAKDVINEEGSSEDGNSEEMKDSDDDV 226
>01_01_0863 -
6724200-6724414,6726300-6726576,6726976-6727145,
6727250-6727526
Length = 312
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 363 EELRKAHPDVEKNATDLREKLQAAVQN 443
EELR+ HPDV TDL + VQN
Sbjct: 211 EELREKHPDVAIMHTDLFRHVSEMVQN 237
>02_01_0305 + 2041370-2043114,2043764-2044121
Length = 700
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 372 GAPRPCARCSASTVPKPPWPCRSRLRALPGDSWRRR*AVEHGLGAVLPSLAEVL 211
GAP P RC A++ P W ++R GD + E G +LP LA L
Sbjct: 258 GAPFPRRRCGAASPSLPWWFAAEQVRFGVGDPF------ESDDGGILPDLAAFL 305
>03_05_0373 + 23581812-23583293
Length = 493
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 354 ARCSASTVPKPPW 316
+RCSAST PK PW
Sbjct: 66 SRCSASTPPKSPW 78
>01_07_0084 + 40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 175 QQFNSLTKSKDAQDFSKAWKDGSESVLNSSTPSPR---VSRERSETRTARPRRLWN 333
+Q+N +S + + +S+ W G +S N+ T P S ++S + A P R W+
Sbjct: 1116 RQWNYGQQSYNPEPYSRQWSSGQQS-YNTVTAEPSRQWSSGQQSYSNPAEPSRQWS 1170
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +1
Query: 4 RFASPPHSVSRQHIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQF 183
RF + P S SR+ ++V A + +R A + +K + E H L +
Sbjct: 694 RFKAIP-SHSRRRSTFEQYVRTRADEERKEKRAAQRAAVEAYKQLLEEASEGHTILIHKM 752
Query: 184 NSLTKSKDAQDFSKAW 231
+ +KD ++F + W
Sbjct: 753 QDINSNKDYKEFKRKW 768
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 82 ALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA--WKD 237
A+AQ RR+APD D+ +E L+ + N L + + D+ A W D
Sbjct: 190 AIAQSKTTRREAPDADTDMSMEAQELRHVLD-ELNPLIGAANLWDYLPALRWFD 242
>08_02_1308 - 26024491-26025405
Length = 304
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = -1
Query: 350 DVLPRLFQSLLGLAVRVSERSLETLGEGVELLSTDSEPSFQALLKSCASFDLVSELNCCS 171
D+ P F++LL + + + G+ +++ + ++ FQ LL + +DL C+
Sbjct: 173 DIEPLTFRALLRF-IYTDKLPADDGGDQLKMAAMATDELFQKLLAAADRYDLSRLKLMCA 231
Query: 170 KVLWNSL 150
+ LW ++
Sbjct: 232 QKLWEAV 238
>06_03_0608 +
22705321-22705652,22705809-22706178,22706264-22706656,
22707183-22707204,22707257-22707928,22708019-22708494
Length = 754
Score = 27.1 bits (57), Expect = 7.6
Identities = 25/106 (23%), Positives = 46/106 (43%)
Frame = +3
Query: 54 QVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAHQVKGRTGLQQGLE 233
QV + + LH++ PR+ + LL+ RTP + R L + + GLE
Sbjct: 379 QVYADMYLHKNPPRTSILSGMGWLLETLRTPGE-CHSQLRMNTDLFLDLNDLLVQRYGLE 437
Query: 234 GRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEEL 371
L + ++ A G ++N +A+ + S + I R +E+
Sbjct: 438 PSLHMSTHEMLAMFLFTCGG-NESNRRAQNRFKHSGETISRKFDEV 482
>05_07_0352 -
29475855-29476330,29476421-29477165,29477689-29478081,
29478167-29478473,29478694-29479019
Length = 748
Score = 27.1 bits (57), Expect = 7.6
Identities = 25/106 (23%), Positives = 46/106 (43%)
Frame = +3
Query: 54 QVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAHQVKGRTGLQQGLE 233
QV + + LH++ PR+ + LL+ RTP + R L + + GLE
Sbjct: 373 QVYADIYLHKNPPRTSILSGMGWLLETLRTPGE-CHSQLRMNTDLFLDLNDLLVQRYGLE 431
Query: 234 GRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEEL 371
L + ++ A G ++N +A+ + S + I R +E+
Sbjct: 432 PSLHMSTHEMLAMFLFTCGG-NESNRRAQNRFKHSGETISRKFDEV 476
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/78 (21%), Positives = 38/78 (48%)
Frame = +3
Query: 231 EGRLRVRAQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATD 410
E +L + ++ L GAL +AN A +A + + I + E+L+ +++ N D
Sbjct: 187 EQKLNICEAEIERLKMEL-GALTEANEAAAKAFDTQNEEITKELEDLKTKLEEIKTN-KD 244
Query: 411 LREKLQAAVQNTVQESQK 464
L E +++ + +++
Sbjct: 245 LAESENGKLRSELLSAEE 262
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,233,359
Number of Sequences: 37544
Number of extensions: 220048
Number of successful extensions: 1288
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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