Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0538
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.4  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 393 NSRMLNFLMVPCLSVNASV*LSVCPPRGVNSKFVL 497
           N RM+N+     LS         CPP+GV+ K VL
Sbjct: 36  NRRMVNYYAACLLSKGP------CPPQGVDLKRVL 64


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 268 PLEVSLDQTALACLNNNRRRFLAIE*PFLV 179
           P+EVS+D   L+ ++ +   F A E   LV
Sbjct: 293 PIEVSIDNHTLSVISTDGSDFNATEVDSLV 322


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 5/35 (14%), Positives = 19/35 (54%)
 Frame = -1

Query: 408 LAFENLCFIYLFCNWELSTIE*IYTTKILILFNST 304
           ++F  +C+++   +  +     ++   +L+LF ++
Sbjct: 221 ISFSKICYLHQHLSKSVKLFNEVFGVSLLVLFGNS 255


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 5/35 (14%), Positives = 19/35 (54%)
 Frame = -1

Query: 408 LAFENLCFIYLFCNWELSTIE*IYTTKILILFNST 304
           ++F  +C+++   +  +     ++   +L+LF ++
Sbjct: 239 ISFSKICYLHQHLSKSVKLFNEVFGVSLLVLFGNS 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,726
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)