BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0538 (627 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone oxidoreductase/ARE-... 27 2.2 SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 26 5.1 SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces pom... 25 9.0 >SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone oxidoreductase/ARE-binding protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 329 Score = 27.1 bits (57), Expect = 2.2 Identities = 9/28 (32%), Positives = 19/28 (67%) Frame = +2 Query: 284 VTRYWRHVELNNINIFVVYIYSIVESSQ 367 V+R W+ + NN+NI + +I+ + E+ + Sbjct: 277 VSRLWKEILDNNLNIAIHHIFKLSEAKE 304 >SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 701 Score = 25.8 bits (54), Expect = 5.1 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -1 Query: 429 DTEPSENLAFENLCFIY-LFCNWELSTI 349 + E ENL FE+ C IY L C + + I Sbjct: 93 ERESFENLIFEHACLIYRLACTYHTTAI 120 >SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 290 Score = 25.0 bits (52), Expect = 9.0 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +3 Query: 528 EIEHSVPVSRLYV-DMISETNFKYLQELKFKNVS 626 E E + V+ ++V DM+ ++ YL E F+N S Sbjct: 97 EAEGLLEVTNMFVTDMLRHSHLNYLSEADFENCS 130 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,508,051 Number of Sequences: 5004 Number of extensions: 50603 Number of successful extensions: 106 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 106 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 277683324 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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