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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0537
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429...    76   3e-14
06_01_0256 - 1905767-1905901,1906375-1906407,1906489-1906585,190...    65   5e-11
04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999...    35   0.059
03_05_0348 - 23346182-23348022,23348118-23348148                       32   0.41 
05_07_0173 + 28140484-28140869,28141079-28141481,28141719-281417...    30   1.7  
02_03_0030 - 14083117-14083166,14083620-14083689,14083777-140838...    30   2.2  
06_03_0565 - 22308074-22309510,22309670-22309723                       29   2.9  
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733...    28   6.7  
01_01_0203 - 1756812-1757032,1757646-1757730                           28   6.7  
12_01_0769 - 6978613-6978627,6978699-6978779,6978955-6978958,698...    28   8.9  

>02_03_0084 -
           15041261-15041437,15041625-15041765,15042857-15042946,
           15043111-15043201,15043953-15044155,15045361-15045438,
           15045535-15045651,15046111-15046161,15046405-15046500,
           15046726-15046742,15046938-15047064,15050585-15050681,
           15051565-15051638,15051910-15051993,15052099-15052290,
           15054191-15054319,15055607-15055639,15055747-15055843,
           15055940-15055990,15057494-15057564,15058305-15058455,
           15058625-15058703,15059265-15059346,15060335-15060335,
           15060565-15060620,15060969-15061018,15061511-15061580
          Length = 834

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 34/87 (39%), Positives = 61/87 (70%)
 Frame = +1

Query: 88  RVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVML*S 267
           RVLI+D+L+++++S  CKM DI+ EG++LVED++K+R+PL ++D IY I P+++     +
Sbjct: 59  RVLIMDKLTVKIISCSCKMADITEEGVSLVEDLYKRRQPLPSLDAIYFIQPTKEK----N 114

Query: 268 MTLLSVTASCTELLMFSSLKLVLIFCL 348
           + +  +   C +L+  S L L++  CL
Sbjct: 115 VGVSGMLVRCIDLMPMSMLMLLVYICL 141


>06_01_0256 -
           1905767-1905901,1906375-1906407,1906489-1906585,
           1907080-1907158,1907373-1907454,1907649-1907707,
           1907821-1907893
          Length = 185

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 28/68 (41%), Positives = 49/68 (72%)
 Frame = +1

Query: 58  KGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLIT 237
           K KE+ +  W+VLI+D+ ++R+++  CKM +I+  GI+LVED+ K+REP+ +MD IY + 
Sbjct: 35  KDKET-KSSWKVLIMDKFTVRIMAYACKMAEITDAGISLVEDLFKRREPMPSMDAIYFLQ 93

Query: 238 PSEKSVML 261
           P ++   +
Sbjct: 94  PLKEKAYI 101


>04_03_0037 -
           9991176-9991268,9991403-9991474,9991569-9991928,
           9992466-9992555,9992692-9992782,9993530-9993729,
           9998024-9998101,9998196-9998312,10000017-10000112,
           10000192-10000317,10000533-10000629,10000979-10001023,
           10002106-10002179,10002267-10002350,10002439-10002522,
           10002660-10002851,10003775-10003903,10004061-10004093,
           10004190-10004286,10004833-10004883,10005211-10005289,
           10005480-10005552,10005595-10005691,10006392-10006473,
           10008345-10008691,10010271-10010535,10010624-10010743,
           10010971-10011358
          Length = 1219

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +1

Query: 157 AEGITLVEDIHKKREPLCTMDGIYLITPSEKSVML 261
           A   ++VED++ +R+PL  MD IY I P+++++ +
Sbjct: 453 ASSDSVVEDLYMRRQPLPLMDAIYFIQPTKENIRI 487


>03_05_0348 - 23346182-23348022,23348118-23348148
          Length = 623

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 14/68 (20%), Positives = 35/68 (51%)
 Frame = +1

Query: 52  GPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYL 231
           G  G       +++L++D   + +++   ++ ++   G+TL  +I K R+ +     +YL
Sbjct: 32  GGVGSAEEEEAYKILVMDSPCVALLAPVLRVGELRRHGVTLHLNIDKARQQVPDAPAVYL 91

Query: 232 ITPSEKSV 255
           + P+  +V
Sbjct: 92  LRPTAANV 99



 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +3

Query: 294 MYRAAHVFFTEACPDILFNELSR----SQIAKYIKTLKEINIAFIPYEQQVFSLDSPETF 461
           +Y + H+ F+   P  L   L+     S+ A  +  + +  + F+  E+ +FSL  P  +
Sbjct: 110 LYASFHLNFSTCVPRALLERLASATAASRSAHRVARVADQYLDFVCLEEGLFSLAQPRAY 169

Query: 462 QCMYNPALAQ 491
             + +PA A+
Sbjct: 170 VALNDPAAAE 179


>05_07_0173 + 28140484-28140869,28141079-28141481,28141719-28141781,
            28142350-28142535,28144695-28145076,28145689-28145780,
            28145988-28146737,28146969-28147100,28147149-28147247,
            28147977-28148132,28150187-28150317,28150798-28151254,
            28151327-28151668,28152137-28153001,28153112-28153170,
            28153806-28154261,28154835-28154873,28155016-28155201
          Length = 1727

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 19   QKIMNEVIRYRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAE 162
            +K++    RYR  +G  S+R++W  L    L     + C +M D+ A+
Sbjct: 927  KKLLMIYTRYRAARGARSSRVDWNSL--SDLPASPAACCRRMSDLRAK 972


>02_03_0030 -
           14083117-14083166,14083620-14083689,14083777-14083857,
           14083940-14084065,14084916-14085143,14085246-14085325,
           14086567-14086768,14086857-14086946
          Length = 308

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +1

Query: 88  RVLIVDQLSMRMVSACCKMHDISAEGITLVEDI---HKKREPLCTMDGIYLITPSEKSV 255
           +VL++D  ++ MVS      D+  + + LVE +      RE +  +  +Y + PS  +V
Sbjct: 22  KVLVLDPDTVGMVSVVYSQSDLLRKEVFLVETVDNASSSRESMAHLKAVYFLRPSSDNV 80


>06_03_0565 - 22308074-22309510,22309670-22309723
          Length = 496

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = -1

Query: 553 AERGTEGRDLFSNTFMFALRVCARAGLYMHWNVSGESNENTCCSYGMKAMLISFNVLIYL 374
           A RG +GR  F N F+F L V A   + + + V  E N+     +G+  + I  ++ +++
Sbjct: 86  APRGRKGRSTFFNYFVFCLSVGAL--IAVTFAVWVEDNKGWQWGFGISTIAILLSIPVFV 143

Query: 373 A 371
           A
Sbjct: 144 A 144


>04_03_0927 +
           20871487-20871903,20872667-20872812,20873204-20873301,
           20873378-20873572,20873670-20873797,20873892-20874050,
           20875119-20875223,20875449-20875559,20875653-20875790,
           20875909-20876091,20876362-20876517,20876615-20876738,
           20876820-20877030,20877614-20877729,20877828-20878053,
           20878218-20878311,20879198-20879275,20879822-20879971,
           20880086-20880292,20880584-20880788,20880990-20881096
          Length = 1117

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 149 IYLLKELPWLRTFTRNVNLYALWMVFTSSLRLRNQS 256
           +Y+L+   W+R  T+ ++ Y  W  FT +   RN+S
Sbjct: 667 LYILRLCSWMRATTKEISKYETW--FTLTTLERNKS 700


>01_01_0203 - 1756812-1757032,1757646-1757730
          Length = 101

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 133 CCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEK 249
           CC   + S  G+   ED+ KK +P+C    +    P +K
Sbjct: 46  CCSNCNFSFSGLYTCEDVVKKCDPVCKSCAVVKTHPVKK 84


>12_01_0769 -
           6978613-6978627,6978699-6978779,6978955-6978958,
           6981491-6981570,6985123-6985247,6985703-6985789,
           6985980-6986097
          Length = 169

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +2

Query: 527 IATLCATL---GEYPSVRYRSDWERNVELAQLIQQKLDAYKADETNYGAKDQKKPVLS 691
           ++ +CA +   G YP+   R+D ER      LI  + + + + E      D+++PV++
Sbjct: 49  MSAVCADVIHCGVYPAFMSRNDMERERYYTNLINDESNHFGSSEMGSQYDDEQEPVVN 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,217,543
Number of Sequences: 37544
Number of extensions: 383150
Number of successful extensions: 954
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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