BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0537 (739 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429... 76 3e-14 06_01_0256 - 1905767-1905901,1906375-1906407,1906489-1906585,190... 65 5e-11 04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999... 35 0.059 03_05_0348 - 23346182-23348022,23348118-23348148 32 0.41 05_07_0173 + 28140484-28140869,28141079-28141481,28141719-281417... 30 1.7 02_03_0030 - 14083117-14083166,14083620-14083689,14083777-140838... 30 2.2 06_03_0565 - 22308074-22309510,22309670-22309723 29 2.9 04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733... 28 6.7 01_01_0203 - 1756812-1757032,1757646-1757730 28 6.7 12_01_0769 - 6978613-6978627,6978699-6978779,6978955-6978958,698... 28 8.9 >02_03_0084 - 15041261-15041437,15041625-15041765,15042857-15042946, 15043111-15043201,15043953-15044155,15045361-15045438, 15045535-15045651,15046111-15046161,15046405-15046500, 15046726-15046742,15046938-15047064,15050585-15050681, 15051565-15051638,15051910-15051993,15052099-15052290, 15054191-15054319,15055607-15055639,15055747-15055843, 15055940-15055990,15057494-15057564,15058305-15058455, 15058625-15058703,15059265-15059346,15060335-15060335, 15060565-15060620,15060969-15061018,15061511-15061580 Length = 834 Score = 76.2 bits (179), Expect = 3e-14 Identities = 34/87 (39%), Positives = 61/87 (70%) Frame = +1 Query: 88 RVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVML*S 267 RVLI+D+L+++++S CKM DI+ EG++LVED++K+R+PL ++D IY I P+++ + Sbjct: 59 RVLIMDKLTVKIISCSCKMADITEEGVSLVEDLYKRRQPLPSLDAIYFIQPTKEK----N 114 Query: 268 MTLLSVTASCTELLMFSSLKLVLIFCL 348 + + + C +L+ S L L++ CL Sbjct: 115 VGVSGMLVRCIDLMPMSMLMLLVYICL 141 >06_01_0256 - 1905767-1905901,1906375-1906407,1906489-1906585, 1907080-1907158,1907373-1907454,1907649-1907707, 1907821-1907893 Length = 185 Score = 65.3 bits (152), Expect = 5e-11 Identities = 28/68 (41%), Positives = 49/68 (72%) Frame = +1 Query: 58 KGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYLIT 237 K KE+ + W+VLI+D+ ++R+++ CKM +I+ GI+LVED+ K+REP+ +MD IY + Sbjct: 35 KDKET-KSSWKVLIMDKFTVRIMAYACKMAEITDAGISLVEDLFKRREPMPSMDAIYFLQ 93 Query: 238 PSEKSVML 261 P ++ + Sbjct: 94 PLKEKAYI 101 >04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928, 9992466-9992555,9992692-9992782,9993530-9993729, 9998024-9998101,9998196-9998312,10000017-10000112, 10000192-10000317,10000533-10000629,10000979-10001023, 10002106-10002179,10002267-10002350,10002439-10002522, 10002660-10002851,10003775-10003903,10004061-10004093, 10004190-10004286,10004833-10004883,10005211-10005289, 10005480-10005552,10005595-10005691,10006392-10006473, 10008345-10008691,10010271-10010535,10010624-10010743, 10010971-10011358 Length = 1219 Score = 35.1 bits (77), Expect = 0.059 Identities = 13/35 (37%), Positives = 25/35 (71%) Frame = +1 Query: 157 AEGITLVEDIHKKREPLCTMDGIYLITPSEKSVML 261 A ++VED++ +R+PL MD IY I P+++++ + Sbjct: 453 ASSDSVVEDLYMRRQPLPLMDAIYFIQPTKENIRI 487 >03_05_0348 - 23346182-23348022,23348118-23348148 Length = 623 Score = 32.3 bits (70), Expect = 0.41 Identities = 14/68 (20%), Positives = 35/68 (51%) Frame = +1 Query: 52 GPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKREPLCTMDGIYL 231 G G +++L++D + +++ ++ ++ G+TL +I K R+ + +YL Sbjct: 32 GGVGSAEEEEAYKILVMDSPCVALLAPVLRVGELRRHGVTLHLNIDKARQQVPDAPAVYL 91 Query: 232 ITPSEKSV 255 + P+ +V Sbjct: 92 LRPTAANV 99 Score = 29.5 bits (63), Expect = 2.9 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Frame = +3 Query: 294 MYRAAHVFFTEACPDILFNELSR----SQIAKYIKTLKEINIAFIPYEQQVFSLDSPETF 461 +Y + H+ F+ P L L+ S+ A + + + + F+ E+ +FSL P + Sbjct: 110 LYASFHLNFSTCVPRALLERLASATAASRSAHRVARVADQYLDFVCLEEGLFSLAQPRAY 169 Query: 462 QCMYNPALAQ 491 + +PA A+ Sbjct: 170 VALNDPAAAE 179 >05_07_0173 + 28140484-28140869,28141079-28141481,28141719-28141781, 28142350-28142535,28144695-28145076,28145689-28145780, 28145988-28146737,28146969-28147100,28147149-28147247, 28147977-28148132,28150187-28150317,28150798-28151254, 28151327-28151668,28152137-28153001,28153112-28153170, 28153806-28154261,28154835-28154873,28155016-28155201 Length = 1727 Score = 30.3 bits (65), Expect = 1.7 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = +1 Query: 19 QKIMNEVIRYRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAE 162 +K++ RYR +G S+R++W L L + C +M D+ A+ Sbjct: 927 KKLLMIYTRYRAARGARSSRVDWNSL--SDLPASPAACCRRMSDLRAK 972 >02_03_0030 - 14083117-14083166,14083620-14083689,14083777-14083857, 14083940-14084065,14084916-14085143,14085246-14085325, 14086567-14086768,14086857-14086946 Length = 308 Score = 29.9 bits (64), Expect = 2.2 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +1 Query: 88 RVLIVDQLSMRMVSACCKMHDISAEGITLVEDI---HKKREPLCTMDGIYLITPSEKSV 255 +VL++D ++ MVS D+ + + LVE + RE + + +Y + PS +V Sbjct: 22 KVLVLDPDTVGMVSVVYSQSDLLRKEVFLVETVDNASSSRESMAHLKAVYFLRPSSDNV 80 >06_03_0565 - 22308074-22309510,22309670-22309723 Length = 496 Score = 29.5 bits (63), Expect = 2.9 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = -1 Query: 553 AERGTEGRDLFSNTFMFALRVCARAGLYMHWNVSGESNENTCCSYGMKAMLISFNVLIYL 374 A RG +GR F N F+F L V A + + + V E N+ +G+ + I ++ +++ Sbjct: 86 APRGRKGRSTFFNYFVFCLSVGAL--IAVTFAVWVEDNKGWQWGFGISTIAILLSIPVFV 143 Query: 373 A 371 A Sbjct: 144 A 144 >04_03_0927 + 20871487-20871903,20872667-20872812,20873204-20873301, 20873378-20873572,20873670-20873797,20873892-20874050, 20875119-20875223,20875449-20875559,20875653-20875790, 20875909-20876091,20876362-20876517,20876615-20876738, 20876820-20877030,20877614-20877729,20877828-20878053, 20878218-20878311,20879198-20879275,20879822-20879971, 20880086-20880292,20880584-20880788,20880990-20881096 Length = 1117 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 Query: 149 IYLLKELPWLRTFTRNVNLYALWMVFTSSLRLRNQS 256 +Y+L+ W+R T+ ++ Y W FT + RN+S Sbjct: 667 LYILRLCSWMRATTKEISKYETW--FTLTTLERNKS 700 >01_01_0203 - 1756812-1757032,1757646-1757730 Length = 101 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +1 Query: 133 CCKMHDISAEGITLVEDIHKKREPLCTMDGIYLITPSEK 249 CC + S G+ ED+ KK +P+C + P +K Sbjct: 46 CCSNCNFSFSGLYTCEDVVKKCDPVCKSCAVVKTHPVKK 84 >12_01_0769 - 6978613-6978627,6978699-6978779,6978955-6978958, 6981491-6981570,6985123-6985247,6985703-6985789, 6985980-6986097 Length = 169 Score = 27.9 bits (59), Expect = 8.9 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +2 Query: 527 IATLCATL---GEYPSVRYRSDWERNVELAQLIQQKLDAYKADETNYGAKDQKKPVLS 691 ++ +CA + G YP+ R+D ER LI + + + + E D+++PV++ Sbjct: 49 MSAVCADVIHCGVYPAFMSRNDMERERYYTNLINDESNHFGSSEMGSQYDDEQEPVVN 106 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,217,543 Number of Sequences: 37544 Number of extensions: 383150 Number of successful extensions: 954 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 920 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 954 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1945321620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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