BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0537 (739 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_30587| Best HMM Match : IncA (HMM E-Value=0.42) 62 6e-10 SB_24205| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011 SB_41939| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14 SB_20838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3 SB_9778| Best HMM Match : DMA (HMM E-Value=8.4) 30 2.3 SB_3724| Best HMM Match : VWA (HMM E-Value=0.00054) 29 3.0 SB_33023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_7912| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 9.1 SB_733| Best HMM Match : DUF789 (HMM E-Value=1.3) 28 9.1 >SB_30587| Best HMM Match : IncA (HMM E-Value=0.42) Length = 272 Score = 61.7 bits (143), Expect = 6e-10 Identities = 26/51 (50%), Positives = 38/51 (74%) Frame = +2 Query: 509 ERIAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADETNYG 661 E+IAEQ+ATLCA+LGE+PS+RY+ D + V A ++ +LD YK D+ + G Sbjct: 28 EKIAEQLATLCASLGEFPSIRYKPDNPKMVGFANQVKARLDVYKRDDPSIG 78 >SB_24205| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 168 Score = 37.5 bits (83), Expect = 0.011 Identities = 14/30 (46%), Positives = 23/30 (76%) Frame = +1 Query: 172 LVEDIHKKREPLCTMDGIYLITPSEKSVML 261 +VE++ K+REPL ++ IY++TP E S+ L Sbjct: 63 IVENLEKRREPLPQLEAIYILTPEEDSISL 92 Score = 33.9 bits (74), Expect = 0.14 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +3 Query: 291 IMYRAAHVFFTEACPDILFNELSRSQIAKYIKTLKEINIAFIPY 422 + Y+ AH+FFTE CPD L +L + +K L+ I F+ Y Sbjct: 102 LKYKGAHLFFTEVCPDSLLVQLQGIKRSK----LRGITRKFVDY 141 >SB_41939| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 819 Score = 33.9 bits (74), Expect = 0.14 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +2 Query: 584 WERNVELAQLIQQKLDAYKADETNYGAKDQKKPVLSFSFWTADSIACLRYY 736 W R +E+ L++ L+ E ++G +D KK + + A SI CL YY Sbjct: 102 WLRKMEVNVLLEGYLEKCSTAE-DHGKRDWKKRYFVYKHFLASSIKCLEYY 151 >SB_20838| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 903 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = -3 Query: 608 ELTQHCVPNH--CGIERKDIRRAWHRGSRFVQQYVH 507 E+T H H G ER+DIRR + +FV+ Y+H Sbjct: 682 EMTIHVYDQHEAVGEEREDIRRRFEGVIQFVENYLH 717 >SB_9778| Best HMM Match : DMA (HMM E-Value=8.4) Length = 145 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = -3 Query: 608 ELTQHCVPNH--CGIERKDIRRAWHRGSRFVQQYVH 507 E+T H H G ER+DIRR + +FV+ Y+H Sbjct: 105 EMTIHVYDQHEAVGEEREDIRRRFEGVIQFVENYLH 140 >SB_3724| Best HMM Match : VWA (HMM E-Value=0.00054) Length = 121 Score = 29.5 bits (63), Expect = 3.0 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 Query: 155 DISCILQQAETMRMDSWSTIKTLHSILADSLPLGPR 48 D+ +L + T+ + WS KTL L D L +GPR Sbjct: 10 DLVLLLDSSYTIAEELWSKEKTLVRNLVDRLDIGPR 45 >SB_33023| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 551 Score = 28.3 bits (60), Expect = 6.9 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 Query: 600 STLRSQSLRYRTEGYSPSVAQRVAICSAIRSCL 502 ST R+ +L+YR E Y+P + R + +AIR+ L Sbjct: 120 STWRTTTLKYRIENYTPDL-PREEVDNAIRNAL 151 >SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 850 Score = 28.3 bits (60), Expect = 6.9 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -2 Query: 564 EGYSPSVAQRVAICSAIRSC-LRYESVLELGCTCIGMFQVNPTKIPA 427 +G + S V + ++++ L YES+L LG G F P K P+ Sbjct: 198 DGEAVSCRSMVYVSGSVQAMYLSYESMLNLGILSHGFFSAEPLKNPS 244 >SB_7912| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1020 Score = 28.3 bits (60), Expect = 6.9 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = +1 Query: 76 RIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVED--IHKKREPLCTMDGIYLITPSEK 249 R EW +L + S R + M+ +SA+ ++ED + + LCT + PS+ Sbjct: 730 RKEWVILSLTPFSERCLQITVDMYRVSADKPAVIEDKVLERIIRALCTPMRLKYDCPSQS 789 Query: 250 SVML*SMTLLSV 285 + L +LL+V Sbjct: 790 TWKLAVESLLTV 801 >SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) Length = 2442 Score = 27.9 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -3 Query: 317 ENMSSSVHDAVTDSKVIDQSMTDF 246 E+ SS+ D VTD+K D+ +TD+ Sbjct: 459 EDRSSAYFDCVTDTKASDEGLTDW 482 >SB_733| Best HMM Match : DUF789 (HMM E-Value=1.3) Length = 356 Score = 27.9 bits (59), Expect = 9.1 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +1 Query: 154 SAEGITLVEDIHKKREPLCTMDGIYLITPSEKSVML*SMTLLSVTASCT 300 S G VE + + PLC D I L TP + L +TLL ++ T Sbjct: 100 SGSGCAAVEVMSTQTCPLCLEDSISLATPQAQGCTL-GLTLLDLSQKWT 147 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,795,202 Number of Sequences: 59808 Number of extensions: 462040 Number of successful extensions: 1165 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1099 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1164 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1986074805 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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