Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0537
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.1  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 130 ACCKMHDISAEGITLVEDIH 189
           ACC+ HD+  + ++  E  H
Sbjct: 57  ACCRTHDMCPDVMSAGESKH 76


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 130 ACCKMHDISAEGITLVEDIH 189
           ACC+ HD+  + ++  E  H
Sbjct: 62  ACCRTHDMCPDVMSAGESKH 81


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +1

Query: 46  YRGPKGKESARIEWRVLIVDQLSMRMVSACCKMHDISAEGITLVEDIHKKR 198
           +RGP+G + +  E R + VD +   +        D    GI   ED+  KR
Sbjct: 112 FRGPEGTQVSATELRKIKVD-IHRVLPGKPTTTSDELKRGIINPEDVMLKR 161


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 515 IAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADET 652
           +A   +T+   +    +VR++++ ERN+ +      KLD    D T
Sbjct: 51  VAHGKSTIVKAISGVQTVRFKNELERNITI------KLDTRAEDST 90


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 130 ACCKMHDISAEGITLVEDIH 189
           ACC+ HD+  + ++  E  H
Sbjct: 62  ACCRTHDMCPDVMSAGESKH 81


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 588 SQSLRYRTEGYSPSVAQRVAICSAIRSCLR 499
           +++LR   EGY  +V + +    AIR+ L+
Sbjct: 440 TEALRRFVEGYPHAVPKYIQRLKAIRATLK 469


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 588 SQSLRYRTEGYSPSVAQRVAICSAIRSCLR 499
           +++LR   EGY  +V + +    AIR+ L+
Sbjct: 355 TEALRRFVEGYPHAVPKYIQRLKAIRATLK 384


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 588 SQSLRYRTEGYSPSVAQRVAICSAIRSCLR 499
           +++LR   EGY  +V + +    AIR+ L+
Sbjct: 674 TEALRRFVEGYPHAVPKYIQRLKAIRATLK 703


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,696
Number of Sequences: 438
Number of extensions: 4325
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)