Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0534
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   0.38 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 269 LVSSKWFFPRWAQAL 313
           L+  K+FFPRW Q L
Sbjct: 646 LILDKFFFPRWRQTL 660


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 676 SLFVIIIHLYFYRLNLQAP*FQCRTSL*PIL 584
           S  VI+I ++F+  N+QA      + L PIL
Sbjct: 534 SFVVIVITIFFFTANVQAGELYFMSLLNPIL 564


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 676 SLFVIIIHLYFYRLNLQAP*FQCRTSL*PIL 584
           S  VI+I ++F+  N+QA      + L PIL
Sbjct: 259 SFVVIVITIFFFTANVQAGELYFMSLLNPIL 289


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 605 NFPITHSIACLPLPA 561
           N P+TH+IA  P P+
Sbjct: 335 NLPLTHNIAHNPYPS 349


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 301  PSWKKPFGTD*SMSMNTPSTTFLSTTSV 218
            PS++ P  T+   +  T STT   TT+V
Sbjct: 1172 PSYRPPSTTNHWQTKTTTSTTTRPTTTV 1199


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 355 SKPNTATDDFKNNKPNILSLH 417
           S  NT+T    +NKPN   L+
Sbjct: 427 SNTNTSTSSTNSNKPNSSDLN 447


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 490 CSHCTRLPLSSYMEDLLTNK 549
           C+H   +PL + +E +L +K
Sbjct: 505 CTHVVNIPLGTVVEMVLIDK 524


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,851
Number of Sequences: 336
Number of extensions: 3968
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)