BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0534 (759 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical pr... 71 1e-12 Z66519-4|CAA91373.1| 210|Caenorhabditis elegans Hypothetical pr... 44 9e-05 Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 29 3.6 U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.7 Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 28 6.3 AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical ... 28 8.3 >Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical protein F15D3.6 protein. Length = 209 Score = 70.5 bits (165), Expect = 1e-12 Identities = 28/46 (60%), Positives = 38/46 (82%) Frame = +3 Query: 114 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDG 251 M+IW+SEH F+H WETVAQAA+RKYPNP+N ++ G DVV++ + G Sbjct: 1 MRIWSSEHIFDHEWETVAQAAFRKYPNPLNRSITGIDVVKQTLEAG 46 Score = 68.1 bits (159), Expect = 6e-12 Identities = 30/83 (36%), Positives = 50/83 (60%) Frame = +2 Query: 254 IHTHRLVSSKWFFPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDET 433 I T R++ S + P WA L G + Y+ E + ++P +++ +L T NL ++ VDE Sbjct: 48 ILTERIIQSHFSIPSWATKLTGFSGTQYSHEYTVIDPTRKEFSLTTRNLNGSSFLRVDEK 107 Query: 434 VRYTPHPSDSSKTLLKQEAVVTV 502 + YTP D +KT+LKQ+ +VT+ Sbjct: 108 LTYTPAHEDPNKTILKQDVIVTI 130 Score = 37.1 bits (82), Expect = 0.014 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = +1 Query: 466 KNITKTRSCSHCTRLPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACK 645 K I K T + Y E + S NA KGRQ +EWVI E + +++ Sbjct: 119 KTILKQDVIVTITLPAFADYCEKTFLSIYSQNANKGRQGVEWVIDHLKKEYEAISTKVSS 178 Query: 646 STGELLSQTKKSIDDITTSA 705 E+ + +S ++S+ Sbjct: 179 EVHEMSEKVLRSFGTTSSSS 198 >Z66519-4|CAA91373.1| 210|Caenorhabditis elegans Hypothetical protein B0334.4 protein. Length = 210 Score = 44.4 bits (100), Expect = 9e-05 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +3 Query: 114 MKIWTSEHT-FNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVFI 260 MK+W S +T F + ++ VA A W +YPN +I DV+ER++ D + Sbjct: 1 MKLWDSPNTSFPYSFDEVASAFWDRYPNSHAKHIISEDVLERQITDNTIV 50 >Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical protein F45G2.2a protein. Length = 1235 Score = 29.1 bits (62), Expect = 3.6 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 317 GTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVR 439 GT K +E+ E+NP + + T +NLTF + +V +R Sbjct: 66 GTPKKLTRAEVQEINPAKFEKTEDMSNLTFLNEASVLHNLR 106 >U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform b protein. Length = 781 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 659 YYHKQRSQLMTSQHQQEAQWMISHLKAKST 748 YYH Q+ QL HQQ+ Q + + +S+ Sbjct: 177 YYHNQQKQLQQQHHQQQQQQLAFRPRHRSS 206 >Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical protein R03G8.4 protein. Length = 786 Score = 28.3 bits (60), Expect = 6.3 Identities = 8/25 (32%), Positives = 15/25 (60%) Frame = +3 Query: 522 LHGRPFNQQNFSKCWQRKASYRMGY 596 ++G+PF+ + F +CW + Y Y Sbjct: 465 INGKPFDIEEFGRCWTHQTGYPTVY 489 >AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical protein Y39E4B.2 protein. Length = 445 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -2 Query: 185 FSPCCLSNCFPWMVECVF*CP 123 F+ C L +C P+M ECV CP Sbjct: 63 FNECLLVHCLPYMEECV--CP 81 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,170,288 Number of Sequences: 27780 Number of extensions: 368412 Number of successful extensions: 1019 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 969 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1019 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1809061256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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