Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0534
         (759 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g13070.1 68418.m01498 MSF1-like family protein similar to px1...    47   1e-05
At4g13560.1 68417.m02113 late embryogenesis abundant domain-cont...    33   0.16 
At2g35150.1 68415.m04311 phosphate-responsive 1 family protein s...    31   1.1  
At4g22790.1 68417.m03289 MATE efflux family protein contains Pfa...    29   4.4  
At3g02500.1 68416.m00238 expressed protein                             29   4.4  
At5g12870.1 68418.m01477 myb family transcription factor (MYB46)...    28   5.9  
At2g36580.1 68415.m04486 pyruvate kinase, putative similar to py...    28   5.9  
At5g25840.1 68418.m03066 expressed protein                             28   7.7  
At1g29890.1 68414.m03653 acetyltransferase-related low similarit...    28   7.7  

>At5g13070.1 68418.m01498 MSF1-like family protein similar to px19
           [Gallus gallus] GI:969170; contains Pfam profile
           PF04707: MSF1-like conserved region
          Length = 183

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +2

Query: 254 IHTHRLVSSKWFFPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDET 433
           +HT R ++     P +   +IG   IC+  E + V+   R M L T N++   +I V+E 
Sbjct: 55  LHTTRALTIHAPGPWFLHRIIGQ-DICHCVESTVVDGKSRSMQLTTKNISLKKFIEVEER 113

Query: 434 VRYTPHPSD-SSKTLLKQEAVVTVQ 505
           +RY PHP + S+ T+  QE  + ++
Sbjct: 114 IRYDPHPDNPSAWTVCSQETSIRIK 138



 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +3

Query: 114 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIG----TDVVERKV 242
           +K +  EH + HPWE V+ A+WRK+ +P N  ++      D + RK+
Sbjct: 2   VKAYRQEHVYKHPWERVSAASWRKFADPENKRILSHILEVDTLNRKL 48


>At4g13560.1 68417.m02113 late embryogenesis abundant
           domain-containing protein / LEA domain-containing
           protein similar to LEA protein [Cicer arietinum]
           GI:2909420; contains Pfam profile PF02987: Late
           embryogenesis abundant protein
          Length = 109

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 559 NAGKGRQAIEWVIGKFDTEIKELASSACKSTGELLSQTKKSIDDITTSARSSMDD 723
           NAG+ R   +    ++    K+ A SAC  T +L    +    D+T SAR    D
Sbjct: 7   NAGQNRGQAQEKAEQWTESAKQTAQSACDKTADLTQSARDKAADLTQSARDKTAD 61


>At2g35150.1 68415.m04311 phosphate-responsive 1 family protein
           similar to phi-1 (phosphate-induced gene) [Nicotiana
           tabacum] GI:3759184; contains Pfam profile PF04674:
           Phosphate-induced protein 1 conserved region
          Length = 323

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 493 SHCTRLPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSAC 642
           SH TR  + S +   LT+K+ LNA  G   +  V+   D E++E   + C
Sbjct: 122 SHLTRFSVQSVIRTALTSKLPLNAVNG---LYLVLTSDDVEMQEFCRAIC 168


>At4g22790.1 68417.m03289 MATE efflux family protein contains Pfam
           profile PF01554: Uncharacterized membrane protein family
          Length = 491

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 206 WIHRIRIFSPCCLSNCFPW 150
           W+  I++  PCCL+ C  W
Sbjct: 253 WLTLIKLSGPCCLTVCLEW 271


>At3g02500.1 68416.m00238 expressed protein 
          Length = 278

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 528 HVTTERQPCTVTTASCFSNVFEESEGCGVYRTVSSTA 418
           H+T E Q     +ASC  +  E+ + C    T+SSTA
Sbjct: 20  HLTREDQSSRRFSASCIRSFREDHKSCTTNVTISSTA 56


>At5g12870.1 68418.m01477 myb family transcription factor (MYB46)
           contains PFAM profile: myb DNA binding domain PF00249
          Length = 280

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +1

Query: 529 EDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACKSTGELLSQTKKSIDDITTSAR 708
           EDL+    S+   +  Q    + G+ D EIK   +S  K   + +S T   I++ ++S  
Sbjct: 81  EDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDTSNLINNSSSSPN 140

Query: 709 SSMD 720
           ++ D
Sbjct: 141 TASD 144


>At2g36580.1 68415.m04486 pyruvate kinase, putative similar to
           pyruvate kinase, cytosolic isozyme [Glycine max]
           SWISS-PROT:Q42806
          Length = 527

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -3

Query: 235 LSTTSVPMTAGFIGLGYFRHAA*ATVSHGWLNVCSDVQIFMFFSNI 98
           +ST  V     F+ L Y RHA     +   LN C D+     F+ I
Sbjct: 212 ISTWGVQNKIDFLSLSYCRHAEDVRQARELLNSCGDLSQTQIFAKI 257


>At5g25840.1 68418.m03066 expressed protein
          Length = 173

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 383 LKTTNLTFCHYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQ 505
           L+ T     H I++D T+   P P+ ++ TLL   A+  V+
Sbjct: 4   LQRTISDISHQISIDNTLTKEPSPTATATTLLSLSAISEVE 44


>At1g29890.1 68414.m03653 acetyltransferase-related low similarity
           to O-acetyltransferase [Cryptococcus neoformans var.
           neoformans] GI:17063556
          Length = 470

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 272 LIYEYEYTIYNFSFHNICPYDGWIHRIRIFSPCCLSNC 159
           L YEY Y +   +++   PY  WI  I ++   CL NC
Sbjct: 321 LWYEYIYKLDKVTYNKYHPYTSWI-PITVY--ICLRNC 355


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,938,183
Number of Sequences: 28952
Number of extensions: 332313
Number of successful extensions: 881
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)