Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0533
(717 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 101 4e-22
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 58 7e-09
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 58 7e-09
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 54 1e-07
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 50 2e-06
10_08_0620 - 19321612-19323237 46 4e-05
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 44 2e-04
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 39 0.003
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 39 0.005
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 33 0.23
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 31 1.2
08_01_0692 + 6121443-6122266,6122812-6124798 30 1.6
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 30 1.6
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 29 2.8
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 29 2.8
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 29 4.9
11_06_0713 + 26524984-26525276,26526008-26526434,26526550-265271... 28 8.5
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 101 bits (243), Expect = 4e-22
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = +1
Query: 49 AISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNV 228
++ +LNP AE + AL +NI+AAKG+QDV+KTNLGPKGT+KMLV GAGDIK+TKDGN
Sbjct: 2 SLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNT 61
Query: 229 LLHEMQIQH 255
LL EMQIQ+
Sbjct: 62 LLKEMQIQN 70
Score = 65.3 bits (152), Expect = 5e-11
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Frame = +3
Query: 255 PTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSL 434
PTA +IAR VL IGEL+KQ++ I EG HPR + +GFD+A+ +L
Sbjct: 71 PTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATL 130
Query: 435 EVLESMKIPI----EIARENLVDVARTSLKLRSTQAWQMC*LMLALMRYSPF-------- 578
E LE K + E RE L +ART+L+ T+ +C L L
Sbjct: 131 EFLEKFKTSVVMGDEPDREILKMIARTTLR---TKVGAVCFLAFKLSLLGQLYEGLADQL 187
Query: 579 -ELQANLLICT----------WLKLWR*NTRRXXXXXXXXXXXMDHGARHPDMPKR 713
++ N ++C +++ + +DHG+RHPDM +R
Sbjct: 188 TDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRR 243
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 515 KVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 652
+++ LAD LTD V+AVL IR P +P+DL MVEIM M+HK +T
Sbjct: 178 QLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDT 223
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1
Query: 109 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
NI AAK + D+++T LGP+ +KML+ +G I +T DGN +L E+ I H
Sbjct: 26 NIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAH 74
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEI-ARENLVDVART 503
++L GE+L A+ FI + HP +I + A +L VL+ + + +++ R ++ + ++
Sbjct: 99 IVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALAVLDKIAMHVDVNDRAAMLGLVKS 158
Query: 504 SLKLRST 524
S+ + T
Sbjct: 159 SIGTKFT 165
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1
Query: 109 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
NI AAK + D+++T LGP+ +KML+ AG I +T DGN +L E+ + H
Sbjct: 26 NIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAH 74
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEI-ARENLVDVART 503
++L GE+L A FI + HP +I + A + +L VL+ + IP+++ R ++ + ++
Sbjct: 99 IVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIPVDVDDRVAMLGLVKS 158
Query: 504 SLKLRST 524
S+ + T
Sbjct: 159 SIGTKFT 165
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +1
Query: 85 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
R A NI+A K + +++T+LGPKG KML S GD+ IT DG +L +M + +
Sbjct: 25 RGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDN 81
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIARENLVDVARTS 506
V++ G LL+QA+ + G+HP I EG+++A + + LE + E + N+ + +T
Sbjct: 106 VVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATNIEPLVQTC 165
Query: 507 LKLRSTQAWQMC*LMLA 557
+ S++ C LA
Sbjct: 166 MTTLSSKIVNRCKRTLA 182
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +1
Query: 106 VNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHLQP 264
+NI+AA+ + D ++T+LGP+G KM+ SG ++ IT DG +L M + LQP
Sbjct: 30 LNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSL--LQP 80
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 PTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSL 434
P A ++A V+L G LL++A +S G HP + +++
Sbjct: 80 PAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAV 139
Query: 435 EVLESMKIPIEIA-RENLVDVARTSL 509
EVL +M IPIE++ R++LV A T+L
Sbjct: 140 EVLHAMAIPIELSDRDSLVKSASTAL 165
>10_08_0620 - 19321612-19323237
Length = 541
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIA-RENLVDVART 503
V+L G LL++A +S G HP + + +++EVL M IP+E++ R+ LV A T
Sbjct: 108 VVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMAIPVELSDRDALVKSAST 167
Query: 504 SL 509
+L
Sbjct: 168 AL 169
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +1
Query: 106 VNISAAKGIQDVMKTNLGPKGTMKMLVSGA--GD--IKITKDGNVLLHEMQIQHLQP 264
+NI+A + + +T+LGP+G KM+ S + GD + IT DG +L M + LQP
Sbjct: 30 LNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPL--LQP 84
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/54 (29%), Positives = 34/54 (62%)
Frame = +1
Query: 94 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
+A+ NI A + + + +T+LGP G KM+++ + +T D +++E+++QH
Sbjct: 22 EAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQH 75
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 339 GELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIARENL 485
GELL++A+ I GLHP I G+ A NK++E+LE + +E EN+
Sbjct: 104 GELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDL---VEKGSENM 149
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 52 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 231
I LL + ++ + NI+A + D ++T LGP+G K++ G I+ DG +
Sbjct: 9 IILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATI 68
Query: 232 LHEMQIQH 255
+ + I H
Sbjct: 69 MRLLDIIH 76
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 467
VLL E LK+A +I +G+HP + + A + ++E ++ + IE
Sbjct: 101 VLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDLATSIE 147
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGF----DIARNKSLEVLESMKIPIEIARENLVDV 494
V+L GELL++A+ ++ +HP I G+ + ARN LE K I+ R +L+++
Sbjct: 96 VVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLERTMDNKENIDKFRSDLMNI 155
Query: 495 ARTSL 509
A T+L
Sbjct: 156 AMTTL 160
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 94 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 222
+A A+ + + + D +K +GPKG ++ G K+TKDG
Sbjct: 80 EARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDG 122
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 178 MLVSGAGDIKITKDGNVLLHEMQIQHLQPH*LLERQPLK 294
MLV GD+ IT DG +L ++++H L+E L+
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQ 39
>08_01_0692 + 6121443-6122266,6122812-6124798
Length = 936
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/45 (22%), Positives = 27/45 (60%)
Frame = +1
Query: 235 HEMQIQHLQPH*LLERQPLKMMPLEMVQHLLSSSLESYLNRPTYS 369
H + +QH++ +E + K+ P + +H+L + +++ N+P ++
Sbjct: 887 HLLSLQHIRVEINVELEDRKIYPRDTAEHVLREAAQAHPNKPAFN 931
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 130 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQ 252
+ D++ LGPKG +L S G KI DG + E++++
Sbjct: 75 LADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELE 115
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 130 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQ 252
+ D++ LGPKG +L S G +I DG + E++++
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELE 119
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 76 EFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQ 252
E A A A + + D +K +GPKG ++ K+TKDG + ++ +
Sbjct: 121 EVAFGVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFE 179
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 28 NVLNEMAAISLLNPKAEFAR--AAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG 192
N L +AA+ LNP AR AA A A + A D +T L P+ + K+ +G
Sbjct: 321 NPLKNVAAVLKLNPYFGTARKMAALAEAARVKARTEKLDSKRTKLSPEESSKIKAAG 377
>11_06_0713 +
26524984-26525276,26526008-26526434,26526550-26527171,
26528059-26528099,26528181-26528249,26528565-26528665,
26529300-26529378,26529955-26530053,26530129-26530197,
26530326-26530375,26530482-26530548,26531031-26531125,
26534469-26534856
Length = 799
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 439 TSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMR 332
TS + + +KP V + G K L+N +C S P++
Sbjct: 195 TSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQ 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,270,435
Number of Sequences: 37544
Number of extensions: 348676
Number of successful extensions: 812
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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