Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0533
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 116 1e-26
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 116 1e-26
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 58 8e-09
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 57 1e-08
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 52 4e-07
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 52 4e-07
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 47 2e-05
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 47 2e-05
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 40 0.002
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 40 0.002
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 37 0.013
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 1.1
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 1.1
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.9
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 116 bits (280), Expect = 1e-26
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = +1
Query: 43 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 222
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 223 NVLLHEMQIQH 255
NVLLHEM IQH
Sbjct: 61 NVLLHEMAIQH 71
Score = 88.2 bits (209), Expect = 5e-18
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Frame = +3
Query: 255 PTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSL 434
PTAS+IA+ VLLIGELLKQA+ + EGLHPRI+TEGF+ A K+L
Sbjct: 72 PTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTL 131
Query: 435 EVLESMKIPIEIARENLVDVARTSL--KLRSTQAWQMC*LML-ALMRYSPFELQANLLIC 605
E+LE K + R+ LV+V RT+L KL A + ++ A++ + +L +
Sbjct: 132 ELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMV 191
Query: 606 TWLKLWR*NTRRXXXXXXXXXXXMDHGARHPDMPKRV 716
+++ + +DHGARHPDMP+ V
Sbjct: 192 EKMEM---HHDSDMDTTLVRGLVLDHGARHPDMPRHV 225
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +2
Query: 494 CPYFTKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 652
C +TK+H LAD +T+ VDAVL IR G+ DLHMVE MEM H + +T
Sbjct: 152 CRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMVEKMEMHHDSDMDT 204
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 116 bits (280), Expect = 1e-26
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = +1
Query: 43 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 222
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 223 NVLLHEMQIQH 255
NVLLHEM IQH
Sbjct: 61 NVLLHEMAIQH 71
Score = 88.2 bits (209), Expect = 5e-18
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Frame = +3
Query: 255 PTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSL 434
PTAS+IA+ VLLIGELLKQA+ + EGLHPRI+TEGF+ A K+L
Sbjct: 72 PTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTL 131
Query: 435 EVLESMKIPIEIARENLVDVARTSL--KLRSTQAWQMC*LML-ALMRYSPFELQANLLIC 605
E+LE K + R+ LV+V RT+L KL A + ++ A++ + +L +
Sbjct: 132 ELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMV 191
Query: 606 TWLKLWR*NTRRXXXXXXXXXXXMDHGARHPDMPKRV 716
+++ + +DHGARHPDMP+ V
Sbjct: 192 EKMEM---HHDSDMDTTLVRGLVLDHGARHPDMPRHV 225
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +2
Query: 494 CPYFTKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 652
C +TK+H LAD +T+ VDAVL IR G+ DLHMVE MEM H + +T
Sbjct: 152 CRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMVEKMEMHHDSDMDT 204
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM--KIPIEIARENLVDVAR 500
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+ K P+E RE LV+ A+
Sbjct: 111 VVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVE-NRERLVETAQ 169
Query: 501 TSL 509
TSL
Sbjct: 170 TSL 172
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 94 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQH 86
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM--KIPIEIARENLVDVAR 500
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+ K P+E RE LV+ A+
Sbjct: 111 VVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVE-NRERLVETAQ 169
Query: 501 TSL 509
TSL
Sbjct: 170 TSL 172
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 94 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQH 86
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM--KIPIEIARENLVDVAR 500
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+ K P+E RE LV+ A+
Sbjct: 111 VVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVE-NRERLVETAQ 169
Query: 501 TSL 509
TSL
Sbjct: 170 TSL 172
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 94 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQH 86
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +1
Query: 109 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + H
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIH 84
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +3
Query: 255 PTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSL 434
PTA ++ V++ G LL A +S+G+HP I+E F A ++
Sbjct: 85 PTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAE 144
Query: 435 EVLESMKIPIEIARENLVD-VARTSL--KLRSTQAW 533
++L+ M P++++ + L++ +A TSL K+ S +W
Sbjct: 145 KILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSW 180
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +1
Query: 109 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + H
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIH 84
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +3
Query: 255 PTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSL 434
PTA ++ V++ G LL A +S+G+HP I+E F A ++
Sbjct: 85 PTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAE 144
Query: 435 EVLESMKIPIEIARENLVD-VARTSL--KLRSTQAW 533
++L+ M P++++ + L++ +A TSL K+ S +W
Sbjct: 145 KILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSW 180
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +1
Query: 109 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ ++H
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKH 76
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +1
Query: 109 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++H
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEH 73
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPIE-IARENLVDVAR 500
V++ ELLK+AD + + +HP I G+ +A ++++ + E++ + I R+++V+ A+
Sbjct: 98 VIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAK 157
Query: 501 TSL 509
TS+
Sbjct: 158 TSM 160
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +1
Query: 109 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++H
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEH 73
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPIE-IARENLVDVAR 500
V++ ELLK+AD + + +HP I G+ +A ++++ + E++ + I R+++V+ A+
Sbjct: 98 VIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAK 157
Query: 501 TSL 509
TS+
Sbjct: 158 TSM 160
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 43 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 210
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 211 TKDGNVLLHEMQIQH 255
T DG +L + + +
Sbjct: 61 TNDGATILKSIGVDN 75
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 330 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTS 506
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +ART+
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 507 L 509
L
Sbjct: 161 L 161
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 43 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 210
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 211 TKDGNVLLHEMQIQH 255
T DG +L + + +
Sbjct: 61 TNDGATILKSIGVDN 75
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 330 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTS 506
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +ART+
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 507 L 509
L
Sbjct: 161 L 161
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 43 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 210
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 211 TKDGNVLLHEMQIQH 255
T DG +L + + +
Sbjct: 61 TNDGATILKSIGVDN 75
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 330 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTS 506
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +ART+
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 507 L 509
L
Sbjct: 161 L 161
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +1
Query: 52 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 231
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 232 LHEMQI 249
L + I
Sbjct: 66 LKLLDI 71
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE---IARENLVDVA 497
V+L E+LKQ FI +G+HP+++ A K+L+ L ++I I RE LV A
Sbjct: 98 VVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVKCA 157
Query: 498 RTSL 509
T+L
Sbjct: 158 ATTL 161
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +1
Query: 52 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 231
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 232 LHEMQI 249
L + I
Sbjct: 66 LKLLDI 71
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +3
Query: 327 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE---IARENLVDVA 497
V+L E+LKQ FI +G+HP+++ A K+L+ L ++I I RE LV A
Sbjct: 98 VVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVKCA 157
Query: 498 RTSL 509
T+L
Sbjct: 158 ATTL 161
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 79 FARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 255
F +A+ NI A + +++ GP G KM+++ + +T D +L E++IQH
Sbjct: 21 FKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQH 79
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 82 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 222
A QA+ V ++ + D + +GPKG ++ G KITKDG
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDG 68
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 82 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 222
A QA+ V ++ + D + +GPKG ++ G KITKDG
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDG 68
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 481 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 329
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 575 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 623
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 481 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 329
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 573 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 621
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,517,974
Number of Sequences: 27780
Number of extensions: 301012
Number of successful extensions: 774
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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