Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0532
         (614 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2; ...    60   3e-08
UniRef50_Q94547 Cluster: Regulator of gene activity; n=3; Sophop...    49   1e-04
UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:...    48   2e-04
UniRef50_UPI0000D56792 Cluster: PREDICTED: similar to CCR4-NOT t...    45   0.001
UniRef50_Q3W7E3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_A4E6G7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q8SXX2 Cluster: RH06639p; n=8; Endopterygota|Rep: RH066...    33   7.1  
UniRef50_Q0US85 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  

>UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2;
           Endopterygota|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 513

 Score = 60.5 bits (140), Expect = 3e-08
 Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
 Frame = +2

Query: 302 SRATLFG-QRAFADRRSTMP----TTLSQAXXXXXXXXXXXXRFNAGNNYHSVFGEG-GD 463
           +R+ LFG QR FADRR+ MP    TT+S                N+ NN+HSVF  G  +
Sbjct: 114 ARSNLFGGQRGFADRRA-MPGLSGTTMSNMVSFMQSRGYGSQSGNSINNFHSVFDNGTAE 172

Query: 464 TSTPPLLDLSEFPSL 508
           T TPPLLDLSEFPSL
Sbjct: 173 TGTPPLLDLSEFPSL 187



 Score = 39.5 bits (88), Expect = 0.062
 Identities = 23/39 (58%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +1

Query: 499 SITTARGA-GDQXXXXXXXXX--GSKPYVGMVKQPTSEQ 606
           S+T ARG   DQ           GSKPYVGMVKQPTSEQ
Sbjct: 186 SLTNARGGQNDQSLPQSNALQPPGSKPYVGMVKQPTSEQ 224


>UniRef50_Q94547 Cluster: Regulator of gene activity; n=3;
           Sophophora|Rep: Regulator of gene activity - Drosophila
           melanogaster (Fruit fly)
          Length = 585

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 37/94 (39%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
 Frame = +2

Query: 257 RNSTAMPGGAPPSMASR-ATLFGQRAFADRRSTMPTTLSQAXXXXXXXXXXXXRFNAG-- 427
           RN+    GG   S  +R A LFGQR F +RR+                      +  G  
Sbjct: 76  RNAQLSVGGPAISSGNRNANLFGQRQFVERRAMQGLGSGPMSNMGNFMQTGRGGYGTGGG 135

Query: 428 -----NNYHSVFGEGG--DTSTPPLLDLSEFPSL 508
                NN+H VFG GG  DTSTP LLD +EFPSL
Sbjct: 136 GGGPLNNFH-VFGGGGGSDTSTPALLDPTEFPSL 168



 Score = 33.1 bits (72), Expect = 5.4
 Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
 Frame = +1

Query: 499 SITTARGAGDQXXXXXXXXX--GSKPY------VGMVKQPTSEQ 606
           S+T ARG  DQ           GSKPY       GMVKQPTSEQ
Sbjct: 167 SLTNARGQNDQTLPQSNPLQPPGSKPYGNFFTSFGMVKQPTSEQ 210


>UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:
           ENSANGP00000026958 - Anopheles gambiae str. PEST
          Length = 537

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 22/31 (70%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = +2

Query: 419 NAGNNYHSVF-GEGGDTSTPPLLDLSEFPSL 508
           N+ NNYH VF G   +T TPPLLDLSEFPSL
Sbjct: 140 NSINNYHGVFDGSAAETGTPPLLDLSEFPSL 170


>UniRef50_UPI0000D56792 Cluster: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 2 isoform b; n=2;
           Endopterygota|Rep: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 2 isoform b - Tribolium
           castaneum
          Length = 483

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +2

Query: 293 SMASRAT-LFGQRAFADRRSTMPTTLSQAXXXXXXXXXXXXRFNAGNNYHSVFGEGGDTS 469
           SM+   T +FGQRA +DRR  +P   + +             FN      SVFG G DT+
Sbjct: 26  SMSGHVTPVFGQRAPSDRRG-IPAMGNSSQMGNMNSLGGYSSFN------SVFGSG-DTN 77

Query: 470 TPPLLDLSEFPSL 508
           TP LLDLSEFPSL
Sbjct: 78  TPSLLDLSEFPSL 90



 Score = 35.5 bits (78), Expect = 1.0
 Identities = 18/32 (56%), Positives = 20/32 (62%)
 Frame = +1

Query: 508 TARGAGDQXXXXXXXXXGSKPYVGMVKQPTSE 603
           T R +GD          G+KPYVGMVKQPTSE
Sbjct: 91  TNRSSGDNVPQPSPMP-GAKPYVGMVKQPTSE 121


>UniRef50_Q3W7E3 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 344

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 591 LLHHTNIGFRARRWWCCSGCLVTRASCCSDGNSLRSRSGGVDVSP 457
           LL HT +   A  WW   GC V RA+C + G+ L +    V + P
Sbjct: 266 LLAHT-LAAAAASWWTSRGCRVLRAACLTLGSCLSALRAPVALVP 309


>UniRef50_A4E6G7 Cluster: Putative uncharacterized protein; n=1;
           Listeria monocytogenes HPB2262|Rep: Putative
           uncharacterized protein - Listeria monocytogenes HPB2262
          Length = 89

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 12  FITSKRKYLSWQSIRDYEPFLFFIK*LNK 98
           F+ +  KY +W++I D  P LFF   LNK
Sbjct: 47  FLANDEKYTNWEAIGDVHPHLFFTVDLNK 75


>UniRef50_Q8SXX2 Cluster: RH06639p; n=8; Endopterygota|Rep: RH06639p
           - Drosophila melanogaster (Fruit fly)
          Length = 844

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 267 LQCQAELPHQWHLELRCLVNELLQTEGLQCQQLYLK 374
           L+C A +  QW+ E    VN+  QTE L  QQ Y++
Sbjct: 226 LECTANVAAQWNFETN--VNDFTQTEALNAQQRYVE 259


>UniRef50_Q0US85 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 391

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 603 FRCRLLHHTNIGFRARRWWCCSGCLVTRASCCSDGNSLRSRSGGVDVSPPSPK 445
           F CR L   NI               TR S C   + +++R G V  +PP PK
Sbjct: 101 FACRTLRTLNISGAGEDQLSVGLIASTRPSLCQASSHIKARIGSVAATPPKPK 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,383,079
Number of Sequences: 1657284
Number of extensions: 9474524
Number of successful extensions: 25066
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25032
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)