Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0532
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   4.7  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   4.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   4.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.2  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 534 CLVTRASCCSDGNSLRS 484
           CL+ R  C  DG  L++
Sbjct: 47  CLLDRGKCSPDGQELKN 63


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 534 CLVTRASCCSDGNSLR 487
           CL+ R +C  DG  L+
Sbjct: 49  CLMERGTCSPDGEELK 64


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 333 KAR*PNNVALDAIDGGAPP 277
           K + P ++ +D  DGG PP
Sbjct: 24  KGKMPIDLVIDERDGGKPP 42


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 264 ELRQATRRPQKLVSHVLRHYQQDLSSLC 181
           E + A   P KL  + LR  +++ +S+C
Sbjct: 203 EFKSAKTPPNKLNCYDLRRVRKNYNSIC 230


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +3

Query: 315  CLVNELLQTEGLQCQQLYLKLILIQCRV*VICH--GSTL--ATTTIQFLVKVVTHQH 473
            C+V +L + + LQ   L     L    V  ICH   ST+   + + + + K+ T+ H
Sbjct: 895  CVVLQLQENDWLQLGYLIFVSTLYTANVVCICHVCYSTIQEVSKSGELIHKIATNDH 951


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 534 CLVTRASCCSDGNSLRS 484
           CL+ R  C  DG  L++
Sbjct: 47  CLLDRGKCSPDGQELKN 63


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 333 KAR*PNNVALDAIDGGAPP 277
           K + P ++ +D  DGG PP
Sbjct: 180 KGKMPIDLVIDERDGGKPP 198


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 369 LKLILIQCRV*VICHGSTLATTTIQF 446
           LK  L Q R   + HG T+  TT+ F
Sbjct: 164 LKAQLWQNRYETVAHGMTVQKTTLFF 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,074
Number of Sequences: 336
Number of extensions: 2428
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)