BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0532 (614 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 29 2.6 AF036703-4|AAB88555.1| 261|Caenorhabditis elegans Hypothetical ... 28 4.6 Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 6.1 Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 6.1 U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 27 8.1 >U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical protein T22F7.3 protein. Length = 988 Score = 29.1 bits (62), Expect = 2.6 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 567 FRARRWWCCSGCLVTRASCCSDGNSLRSRSGGV 469 FRA++ C + A+ CSDG S +SRS V Sbjct: 830 FRAKKTLLPVRCTLNNANTCSDGYSCQSRSKNV 862 >AF036703-4|AAB88555.1| 261|Caenorhabditis elegans Hypothetical protein T11F8.1 protein. Length = 261 Score = 28.3 bits (60), Expect = 4.6 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = +2 Query: 8 LVYYIEAEIFILA-EYTRL*TILILYKIVEQGLIIGYGK 121 ++ + E E+F L+ E+ R LI++ I+ GL+IG+ K Sbjct: 23 VILFYEYEVFDLSDEWHRFNLYLIIFTIMVLGLLIGFAK 61 >Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical protein F58A4.11 protein. Length = 691 Score = 27.9 bits (59), Expect = 6.1 Identities = 11/42 (26%), Positives = 23/42 (54%) Frame = +2 Query: 455 GGDTSTPPLLDLSEFPSLQQEARVTKHPLQHHHLRALNPMLV 580 GG+ +TPP + S FPS + ++ + + R+ +P ++ Sbjct: 504 GGNVTTPPTPNSSSFPSTPKTPQLVQQIISQSFARSQSPNVI 545 >Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical protein F58A4.11 protein. Length = 691 Score = 27.9 bits (59), Expect = 6.1 Identities = 11/42 (26%), Positives = 23/42 (54%) Frame = +2 Query: 455 GGDTSTPPLLDLSEFPSLQQEARVTKHPLQHHHLRALNPMLV 580 GG+ +TPP + S FPS + ++ + + R+ +P ++ Sbjct: 504 GGNVTTPPTPNSSSFPSTPKTPQLVQQIISQSFARSQSPNVI 545 >U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical protein K06A1.6 protein. Length = 937 Score = 27.5 bits (58), Expect = 8.1 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +2 Query: 452 EGGDTSTPPLLDLSEFPSLQQEARVTKHPLQHHHLRALNPMLVW*SSRHRNK 607 + G S PL ++ + S+ +A V LQ HH R+ NP ++ +SR +N+ Sbjct: 561 DDGMQSALPLTVMTNYFSIGADAHVA---LQFHHSRSANPQML--NSRLKNR 607 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,788,986 Number of Sequences: 27780 Number of extensions: 227495 Number of successful extensions: 580 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 580 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1332243108 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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