BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0532 (614 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.78 AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.5 AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 5.5 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.2 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.2 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 24.6 bits (51), Expect = 0.78 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +3 Query: 426 ATTTIQFLVKVVTHQHHHFWT*ANFHHY 509 ATTT L+K T Q HH N HH+ Sbjct: 125 ATTTATGLIKQETLQRHHHL--QNHHHH 150 Score = 21.8 bits (44), Expect = 5.5 Identities = 11/38 (28%), Positives = 14/38 (36%) Frame = +2 Query: 458 GDTSTPPLLDLSEFPSLQQEARVTKHPLQHHHLRALNP 571 GD S PP L S +A+ P Q + P Sbjct: 804 GDQSQPPHQQLHHHQSTHPQAQAQAQPQQQQQQQQQQP 841 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 21.8 bits (44), Expect = 5.5 Identities = 7/15 (46%), Positives = 12/15 (80%) Frame = +1 Query: 568 PYVGMVKQPTSEQIR 612 PYV +++QP S+ +R Sbjct: 45 PYVEIIEQPASKALR 59 >AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. Length = 602 Score = 21.8 bits (44), Expect = 5.5 Identities = 7/15 (46%), Positives = 12/15 (80%) Frame = +1 Query: 568 PYVGMVKQPTSEQIR 612 PYV +++QP S+ +R Sbjct: 45 PYVEIIEQPASKALR 59 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.4 bits (43), Expect = 7.2 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = -3 Query: 600 RCRLLHHTNIGFRARRW 550 RC +HH F A+ W Sbjct: 72 RCSDVHHFESSFNAQSW 88 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 21.4 bits (43), Expect = 7.2 Identities = 11/33 (33%), Positives = 14/33 (42%) Frame = +2 Query: 473 PPLLDLSEFPSLQQEARVTKHPLQHHHLRALNP 571 PP + LS P R+ L+ HH R P Sbjct: 130 PPSVSLSSPPREPGTPRINFTKLKRHHPRYKRP 162 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 155,143 Number of Sequences: 438 Number of extensions: 2777 Number of successful extensions: 9 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18215697 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -