BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0532 (614 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g25470.1 68417.m03667 DRE-binding protein (DREB1C) / CRT/DRE-... 27 9.9 At4g12370.1 68417.m01955 hypothetical protein 27 9.9 At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 27 9.9 >At4g25470.1 68417.m03667 DRE-binding protein (DREB1C) / CRT/DRE-binding factor 2 (CBF2) identical to DREB1C GI:3738228 from [Arabidopsis thaliana], DREB1C [Arabidopsis thaliana] GI:3660552, CRT/DRE binding factor 2 [Arabidopsis thaliana] GI:4091984; contains Pfam profile PF00847: AP2 domain; identical to cDNA CRT/DRE binding factor 2 (CBF2) GI:4322227 Length = 216 Score = 27.1 bits (57), Expect = 9.9 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +2 Query: 425 GNNYHSVFGEGGDTSTPPLLDLSEFPSLQQEARVTKHPL 541 G++Y S GGD S + P+ +++ R T+HP+ Sbjct: 12 GSDYESPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPI 50 >At4g12370.1 68417.m01955 hypothetical protein Length = 300 Score = 27.1 bits (57), Expect = 9.9 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = -3 Query: 603 FRCRLLHHTNIGFRARRWWCCSG 535 FR L+H+N+ + RR++C G Sbjct: 121 FRSETLNHSNVVYAKRRFYCLDG 143 >At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) identical to SP|O64806 Potential calcium-transporting ATPase 7, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong similarity to SP|O81108 Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) {Arabidopsis thaliana} Length = 1015 Score = 27.1 bits (57), Expect = 9.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 239 GRLVACRNSTAMPGGAPPSMASRATLFGQRAFAD 340 G+L AC N+ + G P ++ R LFG FA+ Sbjct: 124 GKLKACPNA-GLSTGEPEQLSKRQELFGINKFAE 156 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,020,160 Number of Sequences: 28952 Number of extensions: 208317 Number of successful extensions: 556 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 532 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 556 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1236350304 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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