Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0531
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           26   0.29 
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    24   1.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.2  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPS 693
           NN   TSN  + + N N+ + H      KNNP       N N    + + + +++ KN  
Sbjct: 366 NNQPSTSNNRWHNNNGNNSNNH----WRKNNPN-----DNRNNTSSRAQGETSRNSKNSG 416

Query: 694 N 696
           N
Sbjct: 417 N 417



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 544 FGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQS 678
           F  ++S+ Q   N   S  NN   +N   N+N + +K   + N++
Sbjct: 354 FPKRSSDEQQWRNNQPSTSNNRWHNNNGNNSNNHWRKNNPNDNRN 398


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +2

Query: 401 ANNLEQSTILPQTSALNNDASYIIRYANKQPNEFSNS 511
           ANNL QSTIL  T   N D S+  +  + +  + SNS
Sbjct: 30  ANNLTQSTIL-TTCESNTDFSFGSKTIDFRKIQCSNS 65


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 676 SYKNPSNYEKQNIQPIILVLA 738
           S KNP N E    QP++++++
Sbjct: 222 SDKNPPNTENNCAQPVVVIMS 242


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +3

Query: 42  LNERKSQDKHTENLIPNLTNSHKSYGYTGIDKD-ESIVSQDKVAFTNDNGNLYQSKESRS 218
           LN   +  K   +LI +  +    +GY GID D E   + DK  F      + Q+  S+ 
Sbjct: 112 LNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEYPANADKENFVKLLQEMKQAFGSKY 171

Query: 219 ENSGTSTQDTVP 254
             S T + + +P
Sbjct: 172 VLSVTVSANPLP 183


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = +1

Query: 511 PNNNDDTSNMNFGS-QNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRK 651
           P   +   N+N  +      Q  H  + + + NP + N    AN NRK
Sbjct: 342 PEFRERLLNVNLSAVDQKTRQEVHMFLMAIEKNPPIMNLNGYANVNRK 389


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = +1

Query: 511 PNNNDDTSNMNFGS-QNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRK 651
           P   +   N+N  +      Q  H  + + + NP + N    AN NRK
Sbjct: 342 PEFRERLLNVNLSAVDQKTRQEVHMFLMAIEKNPPIMNLNGYANVNRK 389


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 621 IINSRIIFIGSYCIMC-ALVITI 556
           +IN R+IFI  + +M   L++T+
Sbjct: 85  VINKRLIFIECFVMMALTLIVTL 107


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 621 IINSRIIFIGSYCIMC-ALVITI 556
           +IN R+IFI  + +M   L++T+
Sbjct: 85  VINKRLIFIECFVMMALTLIVTL 107


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 78  NLIPNLTNSHKSYGYTGIDKD-ESIVSQDKVAF 173
           NLI +     + YG+ G+D D E   ++DK  F
Sbjct: 124 NLIASSFEYFEKYGFNGLDIDWEYPEAKDKENF 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,809
Number of Sequences: 336
Number of extensions: 3885
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)