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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0531
         (765 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po...    35   0.015
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa...    29   0.55 
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual       29   0.73 
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar...    29   0.96 
SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit Cdc22|...    29   0.96 
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar...    28   1.7  
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb...    27   2.2  
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein...    27   2.9  
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo...    27   2.9  
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    27   2.9  
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp...    27   3.9  
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces...    27   3.9  
SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy...    27   3.9  
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa...    26   5.1  
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc...    26   6.8  
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb...    26   6.8  
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos...    25   9.0  

>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 658

 Score = 34.7 bits (76), Expect = 0.015
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +1

Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLN--QSY-- 681
           NNN+++++ N+ + NS + +  +   S        +F  +++GN  K+  + N  Q+Y  
Sbjct: 564 NNNNNSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNYGN 623

Query: 682 KNPSNYEKQN 711
            N  NY   N
Sbjct: 624 NNNQNYNNNN 633



 Score = 29.1 bits (62), Expect = 0.73
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
 Frame = +1

Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKN-- 687
           N+N   +N N  + NSN  +  + +    +   + + F  ++GN        + +Y N  
Sbjct: 519 NSNSSNNNSNTSNNNSNTSNNESMVSKLSSLSGMASSFLGSSGNNNNNNNSNSGNYNNNN 578

Query: 688 --PSNYEKQNIQPIILVLANPYMNRPS 762
              +N + Q     +  LA+ ++N  S
Sbjct: 579 SGNNNQQHQQSSSSLQGLASSFLNSSS 605


>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 639

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +1

Query: 523 DDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSNYE 702
           DD  N    S+NSN Q+T  + + + ++PT+D           +EE  LN+  K   NYE
Sbjct: 306 DDFENSLHPSENSNSQATIPSKKRNFDDPTIDEMV--------QEEKLLNKQRKYGQNYE 357


>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 706

 Score = 29.1 bits (62), Expect = 0.73
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +1

Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNP 690
           P  +  +   N   Q    Q+T NT     +NP      T       +++ ++ Q Y N 
Sbjct: 623 PTQHTGSKFTNSAGQTIQAQATGNT-----HNPFQSQQATGYYKQPMQQQQNMQQPYYNQ 677

Query: 691 SNYEKQNIQPI 723
            NY  QN QP+
Sbjct: 678 QNYNYQNQQPM 688


>SPBC19F5.03 |||inositol polyphosphate phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 598

 Score = 28.7 bits (61), Expect = 0.96
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = +3

Query: 75  ENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENSGTSTQDTVP 254
           EN+I  L N H  Y Y    K+ S +  D+V+       L    +   E  G +T DT  
Sbjct: 311 ENVIRRLDNPHIHYHYFDFHKECSHMRWDRVSL------LLNEIQPELEEQGYTTLDTQK 364

Query: 255 KLFMYRQTAYKIINCI 302
              + RQ      NC+
Sbjct: 365 YRVLSRQNGVVRSNCM 380


>SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit
           Cdc22|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 811

 Score = 28.7 bits (61), Expect = 0.96
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 365 LYYIVKSNNFNAANNLEQSTILPQTSALNNDASYIIRYANKQPNEFS 505
           ++ I  + ++ A  N   + I+P     NN A Y+ +  NK+P  F+
Sbjct: 252 IHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFA 298


>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
           Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 768

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +3

Query: 99  NSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENSGTSTQDTVP 254
           N+H   G   ++++ +IVS+ K   T  + +      S + +SG ST   +P
Sbjct: 77  NNHDDTGTQNVERENNIVSEAKKQKTLGSSSSSSDAVSSNNDSGASTPIPLP 128


>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 2685

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 526  DTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFT-NANGNRKKEELDLNQSYKN 687
            D S  +    +S +Q+  +   +D N+    N  T NAN  ++K E DLN+S+++
Sbjct: 964  DPSPKSASESSSFYQNGSDIDDNDSNSSNTSNHTTENANAQQRKLE-DLNRSFED 1017


>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 715

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 508 FPNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNAN 639
           F + N D SN + G+ +SN   TH    +   N T    F NAN
Sbjct: 112 FHSANSDVSNNSNGALSSNMLKTH----AHHTNSTKSTIFRNAN 151


>SPBC11C11.02 |imp2||contractile ring protein
           Imp2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 670

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +1

Query: 523 DDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSNYE 702
           D   N+N  S+    Q    ++   +N      + +  NG+R    L  ++S K PS+  
Sbjct: 460 DSRPNVNTPSRRQQIQEEFGSVLQMENRAVSPVYDSRKNGSRSSFTLRKSRSPKRPSSSL 519

Query: 703 KQN 711
            QN
Sbjct: 520 SQN 522


>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 977

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 21/72 (29%), Positives = 34/72 (47%)
 Frame = +3

Query: 63  DKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENSGTSTQ 242
           D+  E     L+ S  ++G      D+SI+  D V+  +DN +LYQ      +N    + 
Sbjct: 19  DESNELFFSALSESSMNHG----TPDDSILL-DLVS-RSDNKDLYQDSLDVRDNFSNLSS 72

Query: 243 DTVPKLFMYRQT 278
           D +P+   Y QT
Sbjct: 73  DEIPQSSSYEQT 84


>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
           Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 778

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +1

Query: 589 RSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSN--YEKQNIQPI 723
           RS+ N+    ++  + N N   EEL L Q ++ PS   + KQ+ Q I
Sbjct: 46  RSNDNSNKEFSYSKDVNNNGAVEELSLTQLFEVPSQAAFAKQSSQDI 92


>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 681

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 314 SSGDSIIMSRAQTNKGPLYYIVKSNNFNAANNLEQS 421
           SSGDS  +S + ++KG L  +  S N + ++N E S
Sbjct: 238 SSGDSTPLSGSSSSKGMLMSMSTSENHSLSSNPELS 273


>SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1010

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +1

Query: 16  IATLKITRLLMNESLRISILKI*YLT*QIVINPMVTLV*I-RTSLLLVKTKWRLQMIMGI 192
           ++ L     + N  LR  + +I Y   Q  +     L+ + RTS   V T+W L  +M  
Sbjct: 618 VSFLTQANYIKNPYLRAKLAEILYFGVQTHVGRSELLLDVVRTSK--VATRWLLPALMAF 675

Query: 193 YIKVKNLVPKTQ 228
           YI++++    TQ
Sbjct: 676 YIEIESTGQSTQ 687


>SPAC23C4.19 |spt5||transcription elongation factor
           Spt5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 990

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +1

Query: 529 TSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELD 666
           T+N    S   +H  + N    +K     +N   N N N KKE+ D
Sbjct: 53  TTNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDED 98


>SPBC19G7.06 |mbx1||MADS-box transcription factor
           Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 436

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 72  TENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNG 188
           T+N IP LT   ++YG +    D S V + +      NG
Sbjct: 211 TDNFIPFLTPKRQAYGQSSSRADRSSVRRSQSFKNRRNG 249


>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1254

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 21/64 (32%), Positives = 29/64 (45%)
 Frame = +1

Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNP 690
           PN   + S+    S +SNH S H+T         VDN  +N N N    E +L  S  + 
Sbjct: 33  PNVKQEKSDSTLSS-SSNHDSNHDT------PADVDN-SSNVNKNSSSPERELPTSPSHH 84

Query: 691 SNYE 702
           +N E
Sbjct: 85  ANTE 88


>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 591

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 580 NTIRSDKNNPTVDNFFTNANGNRK-KEELDLNQSYKNPSNYEKQNIQ 717
           N+  S+ N     +  ++A+G R  + E D +Q  +NPS+Y +Q  Q
Sbjct: 450 NSEFSETNAMNQTSNHSHADGQRYYRPEQDRSQRLRNPSDYGRQGRQ 496


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,022,963
Number of Sequences: 5004
Number of extensions: 64478
Number of successful extensions: 248
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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