Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0531
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_1086 - 11150017-11151564 30 1.8
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 30 1.8
12_01_0171 - 1268803-1269500,1271491-1271567,1271941-1272065,127... 29 3.1
01_06_1792 - 39912714-39913559 29 3.1
06_01_0112 - 876213-876857,877245-877622,877707-877813,878271-87... 29 4.1
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 29 5.4
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 29 5.4
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 29 5.4
07_01_1111 + 10279778-10280065,10280265-10280340,10280734-102819... 29 5.4
05_04_0413 - 21063868-21064344,21064416-21064482,21064865-210649... 29 5.4
02_02_0537 + 11308195-11309667 29 5.4
01_05_0645 - 23899579-23904483 29 5.4
07_01_0421 - 3215751-3216392,3216786-3217112,3217197-3217341,321... 28 7.1
04_04_1375 + 33040329-33040854,33041611-33041838,33041984-330420... 28 9.4
04_01_0234 + 2963364-2963520,2963931-2964053,2964134-2964205,296... 28 9.4
>08_01_1086 - 11150017-11151564
Length = 515
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 PEHRDPQ-DYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 173
P H D DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 86 PHHEDRLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISADPASSMVAF 141
Query: 174 TNDNGNLYQSKESRSENSGTSTQDTVPK 257
+ NL QS +S T DT+P+
Sbjct: 142 HININNLLQSFPHNKPSSSTKRHDTIPQ 169
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 284 QDNQLYQVAGSSGDSIIMSRAQTNKGPLYYIVKSNNFNAANNLE--QSTILPQTSALNND 457
Q N Q +G + + N P Y +++ F A NL+ Q T PQT+ +
Sbjct: 638 QSNYFMQPVPGTGINGMSGAPSQNGAPSYIPSQASQFAAPTNLQPSQPTFPPQTAMAASQ 697
Query: 458 ASYIIRYANKQPNEFSNS 511
A+ I R A+ QP NS
Sbjct: 698 ATSISRGAS-QPLAVPNS 714
>12_01_0171 -
1268803-1269500,1271491-1271567,1271941-1272065,
1272146-1272234,1272851-1272936,1273509-1273765
Length = 443
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 18 RDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 182
++PQ AL+E D +EN + L++S + T D +E + + D N+
Sbjct: 264 QEPQVVPALHEEPQDDDRSENAVQELSSSEAN---TSSDNNEPLAADDSAECMNE 315
>01_06_1792 - 39912714-39913559
Length = 281
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPS 693
N +DD + N S+H+ H D+NN + D+ + N K+ N NP+
Sbjct: 56 NGSDDDKDKNKHKITSSHK--HKDDEKDRNNHSKDSHGGGNSSNYNKDSYGGNSG--NPN 111
Query: 694 NY 699
NY
Sbjct: 112 NY 113
>06_01_0112 -
876213-876857,877245-877622,877707-877813,878271-878319,
880413-880637,880741-880935
Length = 532
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 583 TIRSDKNNPTVDNFFTNANGNRKKEELD-LNQSYKNPSNYEKQNIQ 717
TI P NFF N G R+ ++L+ LNQS K PSN + +++
Sbjct: 257 TISLSAFGPFGFNFF-NGKGKRQNKKLNNLNQSNKKPSNPNQNSMK 301
>11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 42 LNERKSQDKHTENLIP-NLTNSHKSYGYTGIDKDESIVSQDK----VAFTNDNGNLYQSK 206
L+ R+ + + ++++P + S + T + D+ ++S D VAF + NL QS
Sbjct: 1083 LDYREEKSRDGQDILPMEVEQSMATDKNTKVFSDKILISADPASSMVAFHININNLLQSF 1142
Query: 207 ESRSENSGTSTQDTVPK 257
+S T DT+P+
Sbjct: 1143 PHNKPSSSTKRHDTIPQ 1159
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 28.7 bits (61), Expect = 5.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 PEHRDPQ-DYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 173
P H + DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 687 PHHEERLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISADPASSMVAF 742
Query: 174 TNDNGNLYQSKESRSENSGTSTQDTVPK 257
+ NL QS +S T DT+P+
Sbjct: 743 HININNLLQSFPHNKPSSSTKRHDTIPQ 770
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 28.7 bits (61), Expect = 5.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 PEHRDPQ-DYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 173
P H + DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 928 PHHEERLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISTDPASSMVAF 983
Query: 174 TNDNGNLYQSKESRSENSGTSTQDTVPK 257
+ NL QS +S T DT+P+
Sbjct: 984 HININNLLQSFPHNKPSSSTKRHDTIPQ 1011
>07_01_1111 +
10279778-10280065,10280265-10280340,10280734-10281944,
10283779-10284138
Length = 644
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +1
Query: 526 DTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSNYEK 705
D + N GSQ ST + S V+N T NGN S+K+ N EK
Sbjct: 165 DRATSNLGSQPPIISSTGLSYGSGNR---VENPNTRTNGNLYSSSFQPLPSFKDVPNSEK 221
Query: 706 QNI 714
QN+
Sbjct: 222 QNL 224
>05_04_0413 -
21063868-21064344,21064416-21064482,21064865-21064948,
21065028-21065158,21065504-21065560,21065818-21065866,
21067357-21067442,21067715-21067792,21067952-21068074,
21068705-21068794,21068796-21068849,21068923-21069020,
21069093-21069160,21069688-21069777,21069870-21070117
Length = 599
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = +1
Query: 520 NDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSNY 699
NDD +N + + SN N + + + +GNR +E + Q
Sbjct: 474 NDDANNSDSDNPISNEMELRNGMVGVQQDGIATEIQNECDGNRSQENVTPAQGPVGSQEQ 533
Query: 700 EKQNIQPI 723
KQNI I
Sbjct: 534 PKQNIDKI 541
>02_02_0537 + 11308195-11309667
Length = 490
Score = 28.7 bits (61), Expect = 5.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 PEHRDPQ-DYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 173
P H + DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 86 PHHEERLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISTDPASSMVAF 141
Query: 174 TNDNGNLYQSKESRSENSGTSTQDTVPK 257
+ NL QS +S T DT+P+
Sbjct: 142 HININNLLQSFPHNKPSSSTKRHDTIPQ 169
>01_05_0645 - 23899579-23904483
Length = 1634
Score = 28.7 bits (61), Expect = 5.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 PEHRDPQ-DYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 173
P H + DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 1205 PHHEEMLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISTDPASSMVAF 1260
Query: 174 TNDNGNLYQSKESRSENSGTSTQDTVPK 257
+ NL QS +S T DT+P+
Sbjct: 1261 HININNLLQSFPHNKPSSSTKRHDTIPQ 1288
>07_01_0421 -
3215751-3216392,3216786-3217112,3217197-3217341,
3218885-3218934
Length = 387
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 583 TIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSNYEKQNIQ 717
TI P NFF + K+ +LNQS K PSN + +++
Sbjct: 130 TISLSAFGPFGFNFFNGKGKRQNKKPNNLNQSNKKPSNPNQNSMK 174
>04_04_1375 +
33040329-33040854,33041611-33041838,33041984-33042081,
33042406-33042450,33042678-33042846,33042917-33043026,
33043983-33044051,33044085-33044158,33044738-33044804,
33044876-33044988,33045148-33045237,33046030-33046144,
33046230-33046388
Length = 620
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 132 DKDESIVSQDKVAFTNDNGNLYQSKESRSENSGTSTQDTVPK 257
DK E+ S DK ++ N YQ+ S +N+GT++ + P+
Sbjct: 221 DKVENTKSTDKKDYSKSNVG-YQTNNSACKNNGTTSYNQPPR 261
>04_01_0234 +
2963364-2963520,2963931-2964053,2964134-2964205,
2964709-2964979,2965301-2965380,2966075-2967292,
2968137-2968315
Length = 699
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/70 (24%), Positives = 25/70 (35%)
Frame = +1
Query: 547 GSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSNYEKQNIQPII 726
G N+ S I D N +DN+ N N N + P Y+K I+
Sbjct: 194 GRYNAPTASQVAAISLDVENEVIDNYLDNDNDNDDSSKSGKGSKLTTPDEYDKVICAEIL 253
Query: 727 LVLANPYMNR 756
P ++R
Sbjct: 254 DKAKYPELHR 263
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,331,446
Number of Sequences: 37544
Number of extensions: 320712
Number of successful extensions: 812
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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