Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0531
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   1.5  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   1.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.5  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    23   7.8  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 606
           PN + + SN N    NS+  + +NTI S+ NN
Sbjct: 193 PNASSNNSNNN---NNSSSNNNNNTISSNNNN 221


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 606
           PN + + SN N    NS+  + +NTI S+ NN
Sbjct: 193 PNASSNNSNNN---NNSSSNNNNNTISSNNNN 221


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 606
           PN + + SN N    NS+  + +NTI S+ NN
Sbjct: 145 PNASSNNSNNN---NNSSSNNNNNTISSNNNN 173


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 606
           PN + + SN N    NS+  + +NTI S+ NN
Sbjct: 193 PNASSNNSNNN---NNSSGNNNNNTISSNNNN 221


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 45  NERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNG-NL-YQSKESRS 218
           ++R ++D   EN+    TNS      + + +  S   Q +    +D   NL  +SK S S
Sbjct: 255 SDRLTEDDEDENISVTRTNSTIRSRSSSLSRSRSCSRQAETPRADDRALNLDTKSKPSTS 314

Query: 219 ENSGT 233
            +SGT
Sbjct: 315 SSSGT 319


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/66 (19%), Positives = 32/66 (48%)
 Frame = +1

Query: 508 FPNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKN 687
           + +++  T+     +  S+H +T    RSD +   +D+   +   +RK++        +N
Sbjct: 473 YSSDSTTTTTTTKSASTSSHSTTGTNGRSDSSESDIDDDCRSPRLDRKRK---TGTKKRN 529

Query: 688 PSNYEK 705
           PS+ ++
Sbjct: 530 PSSNDR 535


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 556 SEIQNSYLMYHHYYLGIRKFI 494
           +E+ N+YL  H+ Y+G+ + I
Sbjct: 129 AEVFNAYLPVHNKYIGVSRKI 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,192
Number of Sequences: 2352
Number of extensions: 15197
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)